Description

Ensembl ID AMTR_s00025p00131080 Gene ID Accession -
Symbol Alias - Full Name hypothetical protein
Status Confidence Length 5753 bases Strand Minus strand
Position AmTr_v1.0_scaffold00025 : 1802596 - 1808348 RNA binding domain eIF3g , RRM_1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ERN12415 eIF3g PF12353 6.2e-33 1
ERN12415 RRM_1 PF00076 9.8e-21 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ERN12415 891 296aa ERN12415

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
AMTR_s00025p00131080amborella_trichopodaERN0668689.839685.5615amborella_trichopodaERN1241556.756854.0541
AMTR_s00025p00131080amborella_trichopodaERN0668781.2571.4286amborella_trichopodaERN1241530.743227.027

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
AMTR_s00025p00131080amborella_trichopodaERN1241548.310834.1216chondrus_crispusCDF3456746.428632.7922
AMTR_s00025p00131080amborella_trichopodaERN1241582.094674.6622papaver_somniferumRZC7990082.094674.6622
AMTR_s00025p00131080amborella_trichopodaERN1241581.756875papaver_somniferumRZC6184981.756875
AMTR_s00025p00131080amborella_trichopodaERN1241581.756874.6622papaver_somniferumRZC5398681.756874.6622
AMTR_s00025p00131080amborella_trichopodaERN1241569.256854.3919marchantia_polymorphaPTQ3708871.428656.0976
AMTR_s00025p00131080amborella_trichopodaERN1241568.918954.3919marchantia_polymorphaPTQ2929771.080156.0976
AMTR_s00025p00131080amborella_trichopodaERN1241581.081172.973ficus_caricaFCD_00002200-RA:cds82.474274.2268
AMTR_s00025p00131080amborella_trichopodaERN1241580.743270.2703beta_vulgarisKMT0517282.986172.2222
AMTR_s00025p00131080amborella_trichopodaERN1241586.486575theobroma_cacaoEOY1802786.195374.7475
AMTR_s00025p00131080amborella_trichopodaERN1241584.797377.7027theobroma_cacaoEOY3392687.152879.8611
AMTR_s00025p00131080amborella_trichopodaERN1241557.432440.8784chlamydomonas_reinhardtiiPNW8199660.070742.7562
AMTR_s00025p00131080amborella_trichopodaERN1241585.810876.3513cucumis_meloMELO3C001947.2.187.889378.2007
AMTR_s00025p00131080amborella_trichopodaERN1241584.459575.6757cucumis_meloMELO3C023779.2.186.805677.7778
AMTR_s00025p00131080amborella_trichopodaERN1241582.094670.6081arabidopsis_thalianaAT3G11400.275.700965.109
AMTR_s00025p00131080amborella_trichopodaERN1241575.675760.8108arabidopsis_thalianaAT5G06000.172.727358.4416
AMTR_s00025p00131080amborella_trichopodaERN1241586.148778.0405populus_trichocarpaPotri.010G199000.2.v4.186.734778.5714
AMTR_s00025p00131080amborella_trichopodaERN1241588.175778.3784populus_trichocarpaPotri.008G060000.1.v4.189.078579.1809
AMTR_s00025p00131080amborella_trichopodaERN1241585.810877.027cucumis_sativusKGN6396087.889378.8927
AMTR_s00025p00131080amborella_trichopodaERN1241584.121675cucumis_sativusKGN5773686.458377.0833
AMTR_s00025p00131080amborella_trichopodaERN1241581.756870.6081brassica_junceacds.BjuA05g32720S82.593971.3311
AMTR_s00025p00131080amborella_trichopodaERN1241583.445972.973brassica_junceacds.BjuB07g20740S85.172474.4828
AMTR_s00025p00131080amborella_trichopodaERN1241582.094671.2838brassica_junceacds.BjuA01g04790S82.653171.7687
AMTR_s00025p00131080amborella_trichopodaERN1241583.783872.6351brassica_junceacds.BjuA03g26660S84.353773.1292
AMTR_s00025p00131080amborella_trichopodaERN1241568.918955.7432brassica_junceacds.BjuA10g26540S76.691762.0301
AMTR_s00025p00131080amborella_trichopodaERN1241582.094671.9595brassica_junceacds.BjuB01g06210S82.935272.6962
AMTR_s00025p00131080amborella_trichopodaERN1241582.770371.6216brassica_napusCDY3633182.770371.6216
AMTR_s00025p00131080amborella_trichopodaERN1241583.783872.973brassica_napusCDY5332284.353773.4694
AMTR_s00025p00131080amborella_trichopodaERN1241546.959539.527brassica_napusCDY3633278.977366.4773
AMTR_s00025p00131080amborella_trichopodaERN1241583.783872.6351brassica_napusCDX7387884.353773.1292
AMTR_s00025p00131080amborella_trichopodaERN1241536.148628.3784brassica_napusCDY6725672.297356.7568
AMTR_s00025p00131080amborella_trichopodaERN1241581.756870.6081brassica_napusCDY0853175.62565.3125
AMTR_s00025p00131080amborella_trichopodaERN1241582.094670.2703brassica_napusCDY0101682.935270.9898
AMTR_s00025p00131080amborella_trichopodaERN1241584.459574.3243prunus_persicaONI0011785.03474.8299
AMTR_s00025p00131080amborella_trichopodaERN1241585.810877.027cajanus_cajanC.cajan_20825.t87.586278.6207
AMTR_s00025p00131080amborella_trichopodaERN1241581.081171.9595malus_domestica_goldenmRNA:MD11G007360081.911372.6962
AMTR_s00025p00131080amborella_trichopodaERN1241581.081172.6351malus_domestica_goldenmRNA:MD03G007010081.911373.3788
AMTR_s00025p00131080amborella_trichopodaERN1241585.810877.027glycine_maxKRG9925887.586278.6207
AMTR_s00025p00131080amborella_trichopodaERN1241585.135177.3649glycine_maxKRH4574086.896678.9655
AMTR_s00025p00131080amborella_trichopodaERN1241584.459573.9865prunus_dulcisVVA2980285.03474.4898
AMTR_s00025p00131080amborella_trichopodaERN1241584.121675medicago_truncatulaAET0559385.27476.0274
AMTR_s00025p00131080amborella_trichopodaERN1241577.364965.8784medicago_truncatulaKEH1891781.785769.6429
AMTR_s00025p00131080amborella_trichopodaERN1241584.121672.6351lupinus_angustifoliusOIV9309085.56773.8832
AMTR_s00025p00131080amborella_trichopodaERN1241583.783873.6487lupinus_angustifoliusOIW1054284.931574.6575
AMTR_s00025p00131080amborella_trichopodaERN1241584.121672.973lupinus_angustifoliusOIW1434987.985976.3251
AMTR_s00025p00131080amborella_trichopodaERN1241584.797373.9865lupinus_angustifoliusOIV9391589.007177.6596
AMTR_s00025p00131080amborella_trichopodaERN1241566.891954.0541physcomitrium_patensPp3c9_17550V3.168.7555.5556
AMTR_s00025p00131080amborella_trichopodaERN1241567.567654.3919physcomitrium_patensPp3c15_21950V3.169.444455.9028
AMTR_s00025p00131080amborella_trichopodaERN1241536.824328.3784physcomitrium_patensPp3c9_20330V3.166.463451.2195
AMTR_s00025p00131080amborella_trichopodaERN1241585.810876.0135phaseolus_vulgarisESW2565987.586277.5862
AMTR_s00025p00131080amborella_trichopodaERN1241584.121676.0135phaseolus_vulgarisESW2301784.982976.7918
AMTR_s00025p00131080amborella_trichopodaERN1241584.459574.3243pisum_sativumPsat7g003600.1.cds86.206975.8621
AMTR_s00025p00131080amborella_trichopodaERN1241584.797374.3243pisum_sativumPsat7g003640.1.cds86.551775.8621
AMTR_s00025p00131080amborella_trichopodaERN1241584.121675.3378vigna_angularisKOM5615350.712845.4175
AMTR_s00025p00131080amborella_trichopodaERN1241583.783875vigna_angularisKOM5689985.223476.2887
AMTR_s00025p00131080amborella_trichopodaERN1241584.121675.3378vigna_unguiculataVigun04g089500.1.v1.285.862176.8966
AMTR_s00025p00131080amborella_trichopodaERN1241584.121676.0135vigna_unguiculataVigun04g193800.1.v1.285.56777.3196
AMTR_s00025p00131080amborella_trichopodaERN1241587.162279.7297manihot_esculentaOAY3856987.457680
AMTR_s00025p00131080amborella_trichopodaERN1241587.837879.0541manihot_esculentaOAY4614388.435479.5918
AMTR_s00025p00131080amborella_trichopodaERN1241583.783874.6622solanum_lycopersicumSolyc08g074790.3.184.067874.9153
AMTR_s00025p00131080amborella_trichopodaERN1241583.445975.6757solanum_lycopersicumSolyc03g096680.2.183.728875.9322
AMTR_s00025p00131080amborella_trichopodaERN1241585.135176.3513capsicum_annuumPHT9326685.714376.8708
AMTR_s00025p00131080amborella_trichopodaERN1241585.810877.7027sesamum_indicumSIN_1022738.t87.285279.0378
AMTR_s00025p00131080amborella_trichopodaERN1241572.97363.1757lactuca_sativacds-PLY89098.179.120968.4982
AMTR_s00025p00131080amborella_trichopodaERN1241580.067670.2703lactuca_sativacds-PLY74857.182.867172.7273
AMTR_s00025p00131080amborella_trichopodaERN1241580.743271.2838lactuca_sativacds-PLY63600.182.69973.0104
AMTR_s00025p00131080amborella_trichopodaERN1241584.797377.7027helianthus_annuusmRNA:HanXRQr2_Chr15g072118185.958978.7671
AMTR_s00025p00131080amborella_trichopodaERN1241584.459575.6757solanum_tuberosumPGSC0003DMT40004313085.324276.4505
AMTR_s00025p00131080amborella_trichopodaERN1241584.121675solanum_tuberosumPGSC0003DMT40007732484.406875.2542
AMTR_s00025p00131080amborella_trichopodaERN1241544.594628.3784caenorhabditis_elegansF22B5.2a.150.381732.0611
AMTR_s00025p00131080amborella_trichopodaERN124155033.7838drosophila_melanogasterFBpp007043055.018637.1747
AMTR_s00025p00131080amborella_trichopodaERN1241552.364934.7973drosophila_melanogasterFBpp008329356.776637.7289
AMTR_s00025p00131080amborella_trichopodaERN1241556.081141.8919homo_sapiensENSP0000025310851.87538.75
AMTR_s00025p00131080amborella_trichopodaERN1241546.283830.4054saccharomyces_cerevisiaeYDR429C5032.8467
AMTR_s00025p00131080amborella_trichopodaERN1241580.067669.9324chenopodium_quinoaAUR62001728-RA:cds83.745673.1449
AMTR_s00025p00131080amborella_trichopodaERN1241579.729769.5946chenopodium_quinoaAUR62020047-RA:cds83.687973.0496
AMTR_s00025p00131080amborella_trichopodaERN1241569.256853.7162chara_brauniiGBG6177469.965954.2662
AMTR_s00025p00131080amborella_trichopodaERN1241568.581158.7838arabis_alpinaKFK2499674.907764.2066
AMTR_s00025p00131080amborella_trichopodaERN1241582.094670.9459arabis_alpinaKFK3850382.935271.6724
AMTR_s00025p00131080amborella_trichopodaERN1241586.824378.0405corylus_avellanaCav10g12800.t178.834470.8589
AMTR_s00025p00131080amborella_trichopodaERN1241585.47376.6892ipomoea_trilobaitb12g23180.t186.643877.7397
AMTR_s00025p00131080amborella_trichopodaERN1241586.148779.7297kalanchoe_fedtschenkoiKaladp0101s0069.1.v1.188.850282.23
AMTR_s00025p00131080amborella_trichopodaERN1241587.162279.3919kalanchoe_fedtschenkoiKaladp0041s0043.1.v1.188.965581.0345
AMTR_s00025p00131080amborella_trichopodaERN1241548.986534.4595galdieria_sulphurariaEME264055035.1724
AMTR_s00025p00131080amborella_trichopodaERN1241526.013523.9865eucalyptus_grandisKCW6558282.795776.3441
AMTR_s00025p00131080amborella_trichopodaERN1241531.418930.0676eucalyptus_grandisKCW6558694.89890.8163
AMTR_s00025p00131080amborella_trichopodaERN1241553.378440.5405cyanidioschyzon_merolaeCMH159CT43.406632.967
AMTR_s00025p00131080amborella_trichopodaERN1241582.770372.6351cynara_cardunculusKVI1194174.242465.1515
AMTR_s00025p00131080amborella_trichopodaERN1241582.432474.3243trifolium_pratenseTp57577_TGAC_v2_mRNA148884.722276.3889
AMTR_s00025p00131080amborella_trichopodaERN1241577.02764.527trifolium_pratenseTp57577_TGAC_v2_mRNA451981.428668.2143
AMTR_s00025p00131080amborella_trichopodaERN1241585.47375gossypium_raimondiiKJB7404787.241476.5517
AMTR_s00025p00131080amborella_trichopodaERN1241584.121676.3513gossypium_raimondiiKJB199968375.3333
AMTR_s00025p00131080amborella_trichopodaERN1241585.810874.6622gossypium_raimondiiKJB6761680.634970.1587
AMTR_s00025p00131080amborella_trichopodaERN1241536.148630.7432asparagus_officinalisONK6669276.428665
AMTR_s00025p00131080amborella_trichopodaERN1241575.337862.1622arabidopsis_hallerig15523.t178.245664.5614
AMTR_s00025p00131080amborella_trichopodaERN1241583.445971.2838arabidopsis_hallerig11547.t184.013671.7687
AMTR_s00025p00131080amborella_trichopodaERN1241530.067626.0135arabidopsis_hallerig29323.t1.cds170.078760.6299
AMTR_s00025p00131080amborella_trichopodaERN1241582.770370.6081arabidopsis_hallerig05898.t183.050870.8475
AMTR_s00025p00131080amborella_trichopodaERN1241534.459528.3784arabidopsis_hallerig11548.t1.cds175.555662.2222
AMTR_s00025p00131080amborella_trichopodaERN1241586.148779.3919corymbia_citriodoracds-KAF8022103.187.328880.4795
AMTR_s00025p00131080amborella_trichopodaERN1241582.770372.2973rosa_chinensisPRQ3421983.050872.5424
AMTR_s00025p00131080amborella_trichopodaERN1241585.810879.0541juglans_regiacds.Jr14_10290_p178.395172.2222
AMTR_s00025p00131080amborella_trichopodaERN1241534.121630.0676juglans_regiacds.Jr05_08020_p183.471173.5537
AMTR_s00025p00131080amborella_trichopodaERN1241584.797376.0135juglans_regiacds.Jr05_08010_p186.551777.5862
AMTR_s00025p00131080amborella_trichopodaERN1241583.783872.973brassica_oleraceaBo3g064160.184.353773.4694
AMTR_s00025p00131080amborella_trichopodaERN1241582.094670.2703brassica_oleraceaBo5g136610.182.935270.9898
AMTR_s00025p00131080amborella_trichopodaERN1241556.756844.2568brassica_oleraceaBo9g176640.172.413856.4655
AMTR_s00025p00131080amborella_trichopodaERN1241581.756870.9459brassica_oleraceaBo1g141080.182.312971.4286
AMTR_s00025p00131080amborella_trichopodaERN1241584.459575.3378olea_europaeaOE9A086139C186.805677.4306
AMTR_s00025p00131080amborella_trichopodaERN1241586.148778.3784olea_europaeaOE9A077388C186.734778.9116
AMTR_s00025p00131080amborella_trichopodaERN1241553.378446.6216prunus_aviumPav_sc0001663.1_g290.1.mk:mrna84.042673.4043
AMTR_s00025p00131080amborella_trichopodaERN1241575.675766.2162quercus_subercds-POF00708.178.048868.2927
AMTR_s00025p00131080amborella_trichopodaERN1241554.054147.6351quercus_subercds-POF00706.175.471766.5094
AMTR_s00025p00131080amborella_trichopodaERN1241540.202735.8108quercus_subercds-POF00707.184.397275.1773
AMTR_s00025p00131080amborella_trichopodaERN1241562.162251.3514nicotiana_attenuataOIS9911557.680347.6489
AMTR_s00025p00131080amborella_trichopodaERN1241586.824378.7162citrus_clementinaESR3815687.713379.5222
AMTR_s00025p00131080amborella_trichopodaERN1241581.081170.2703brassica_rapa_ro18A01p053870.1_BraROA.138.338733.2268
AMTR_s00025p00131080amborella_trichopodaERN1241568.918955.7432brassica_rapa_ro18A10p037440.1_BraROA.176.691762.0301
AMTR_s00025p00131080amborella_trichopodaERN1241583.783872.6351brassica_rapa_ro18A03p039150.1_BraROA.184.353773.1292
AMTR_s00025p00131080amborella_trichopodaERN1241584.121675daucus_carotaKZN0298384.121675
AMTR_s00025p00131080amborella_trichopodaERN1241583.783875.3378nymphaea_colorataNC6G0041360.1:cds83.783875.3378
AMTR_s00025p00131080amborella_trichopodaERN1241559.797347.973ostreococcus_lucimarinusABO9660467.045553.7879
AMTR_s00025p00131080amborella_trichopodaERN1241584.459575.3378coffea_canephoraCDP0911086.206976.8966
AMTR_s00025p00131080amborella_trichopodaERN1241586.824379.7297pistacia_veracds-EVM0012534.187.713380.5461
AMTR_s00025p00131080amborella_trichopodaERN1241575.675765.5405quercus_lobataQL08p061462:mrna74.418664.4518
AMTR_s00025p00131080amborella_trichopodaERN1241576.351366.2162quercus_lobataQL08p061495:mrna78.745668.2927
AMTR_s00025p00131080amborella_trichopodaERN1241558.783848.9865camelina_sativaCsa19g015490.166.412255.3435
AMTR_s00025p00131080amborella_trichopodaERN1241559.797346.9595camelina_sativaCsa07g044180.170.855.6
AMTR_s00025p00131080amborella_trichopodaERN1241571.959559.7973camelina_sativaCsa11g012680.156.200546.7018
AMTR_s00025p00131080amborella_trichopodaERN1241568.918956.0811camelina_sativaCsa10g011830.167.774155.1495
AMTR_s00025p00131080amborella_trichopodaERN1241582.432470.9459camelina_sativaCsa15g015130.183.848872.1649
AMTR_s00025p00131080amborella_trichopodaERN1241545.270337.8378camelina_sativaCsa08g058500.173.22461.2022
AMTR_s00025p00131080amborella_trichopodaERN1241570.608157.4324camelina_sativaCsa12g016470.174.642960.7143
AMTR_s00025p00131080amborella_trichopodaERN1241570.945960.473camelina_sativaCsa19g015480.181.712169.6498
AMTR_s00025p00131080amborella_trichopodaERN1241581.756870.2703camelina_sativaCsa01g012440.183.161571.4777
AMTR_s00025p00131080amborella_trichopodaERN1241567.229748.9865selaginella_moellendorffiiEFJ1114969.33850.5226
AMTR_s00025p00131080amborella_trichopodaERN1241567.229748.9865selaginella_moellendorffiiEFJ0518869.33850.5226
AMTR_s00025p00131080amborella_trichopodaERN1241561.824344.2568selaginella_moellendorffiiEFJ1939463.763145.6446
AMTR_s00025p00131080amborella_trichopodaERN1241585.810878.0405vitis_viniferaVitvi13g02003_P00184.385476.7442
AMTR_s00025p00131080amborella_trichopodaERN1241583.445971.2838vitis_viniferaVitvi08g01256_P00184.300372.0136
AMTR_s00025p00131080amborella_trichopodaERN1241588.851382.0946vitis_viniferaVitvi06g00535_P00188.851382.0946
AMTR_s00025p00131080amborella_trichopodaERN1241542.567636.1486eutrema_salsugineumESQ4051673.684262.5731
AMTR_s00025p00131080amborella_trichopodaERN1241567.905453.0405eutrema_salsugineumESQ5440873.090957.0909
AMTR_s00025p00131080amborella_trichopodaERN1241581.081171.6216eutrema_salsugineumESQ4890481.632772.1088
AMTR_s00025p00131080amborella_trichopodaERN1241584.121676.3513corchorus_capsularisOMO6198885.56777.6632
AMTR_s00025p00131080amborella_trichopodaERN1241584.459573.3108corchorus_capsularisOMO5909684.175173.064
AMTR_s00025p00131080amborella_trichopodaERN1241586.486578.3784fraxinus_excelsiorFRAEX38873_v2_000129770.1.cds87.074878.9116
AMTR_s00025p00131080amborella_trichopodaERN1241585.135175.6757fraxinus_excelsiorFRAEX38873_v2_000148960.2.cds87.577.7778
AMTR_s00025p00131080amborella_trichopodaERN1241585.47376.6892citrullus_lanatusCla97C04G079610.187.847278.8194
AMTR_s00025p00131080amborella_trichopodaERN1241584.459575citrullus_lanatusCla97C05G093890.186.805677.0833

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression