Description

Ensembl ID AMTR_s00014p00246150 Gene ID Accession -
Symbol Alias - Full Name glyoxalase II 3
Status Confidence Length 23194 bases Strand Plus strand
Position AmTr_v1.0_scaffold00014 : 5992038 - 6015231 RNA binding domain Lactamase_B
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ERN09194 Lactamase_B PF00753 5.2e-10 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ERN09194 891 296aa ERN09194

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
AMTR_s00014p00246150amborella_trichopodaERN0424542.248124.8062amborella_trichopodaERN0919436.824321.6216
AMTR_s00014p00246150amborella_trichopodaERN0949422.822811.1111amborella_trichopodaERN0919425.675712.5
AMTR_s00014p00246150amborella_trichopodaERN2032034.294920.5128amborella_trichopodaERN0919436.148621.6216

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
AMTR_s00014p00246150amborella_trichopodaERN091947564.8649papaver_somniferumRZC650907464
AMTR_s00014p00246150amborella_trichopodaERN0919474.662264.8649papaver_somniferumRZC4542972.45962.9508
AMTR_s00014p00246150amborella_trichopodaERN0919470.945960.473marchantia_polymorphaPTQ4984281.395369.3798
AMTR_s00014p00246150amborella_trichopodaERN0919473.986565.8784cannabis_sativa_femalecds.evm.model.02.249586.220576.7717
AMTR_s00014p00246150amborella_trichopodaERN0919479.054168.5811cannabis_sativa_femalecds.evm.model.10.197477.227766.9967
AMTR_s00014p00246150amborella_trichopodaERN0919478.378469.5946ficus_caricaFCD_00024733-RA:cds80.555671.5278
AMTR_s00014p00246150amborella_trichopodaERN0919480.067670.9459ficus_caricaFCD_00027958-RA:cds80.067670.9459
AMTR_s00014p00246150amborella_trichopodaERN0919473.986565.2027beta_vulgarisKMS9825385.882475.6863
AMTR_s00014p00246150amborella_trichopodaERN0919478.716268.5811theobroma_cacaoEOX9313274.440964.8562
AMTR_s00014p00246150amborella_trichopodaERN0919478.040570.9459theobroma_cacaoEOY1363379.109671.9178
AMTR_s00014p00246150amborella_trichopodaERN0919466.216258.4459cucumis_meloMELO3C025595.2.171.532863.1387
AMTR_s00014p00246150amborella_trichopodaERN0919473.986565.2027arabidopsis_thalianaAT1G53580.174.489865.6463
AMTR_s00014p00246150amborella_trichopodaERN0919476.351366.5541populus_trichocarpaPotri.001G380100.1.v4.179.858769.6113
AMTR_s00014p00246150amborella_trichopodaERN0919480.067666.8919populus_trichocarpaPotri.005G204800.2.v4.179.79866.6667
AMTR_s00014p00246150amborella_trichopodaERN0919464.189255.4054cucumis_sativusKGN5500776.305265.8635
AMTR_s00014p00246150amborella_trichopodaERN0919471.621662.5brassica_junceacds.BjuA08g01350S74.125964.6853
AMTR_s00014p00246150amborella_trichopodaERN0919469.594659.4595brassica_junceacds.BjuA06g40980S73.835163.0824
AMTR_s00014p00246150amborella_trichopodaERN0919455.743247.6351brassica_junceacds.BjuB04g07660S81.280869.4581
AMTR_s00014p00246150amborella_trichopodaERN0919472.97362.5brassica_junceacds.BjuB07g02200S73.220362.7119
AMTR_s00014p00246150amborella_trichopodaERN0919473.986563.5135brassica_napusCDY4512172.516662.2517
AMTR_s00014p00246150amborella_trichopodaERN0919470.945962.5brassica_napusCDY0250080.459870.8812
AMTR_s00014p00246150amborella_trichopodaERN0919473.310861.1486brassica_napusCDY2408755.927846.6495
AMTR_s00014p00246150amborella_trichopodaERN0919471.959562.5brassica_napusCDY2569973.702464.0138
AMTR_s00014p00246150amborella_trichopodaERN0919481.418970.9459prunus_persicaONI1775680.333370
AMTR_s00014p00246150amborella_trichopodaERN0919472.97365.5405cajanus_cajanC.cajan_29711.t86.74777.9116
AMTR_s00014p00246150amborella_trichopodaERN0919476.689267.5676malus_domestica_goldenmRNA:MD17G011850058.808351.8135
AMTR_s00014p00246150amborella_trichopodaERN0919475.337867.5676malus_domestica_goldenmRNA:MD09G012910075.593267.7966
AMTR_s00014p00246150amborella_trichopodaERN091945042.5676glycine_maxKRH1352078.306966.6667
AMTR_s00014p00246150amborella_trichopodaERN0919477.02766.2162glycine_maxKRH2182860.477551.9894
AMTR_s00014p00246150amborella_trichopodaERN0919481.081170.2703prunus_dulcisVVA291738069.3333
AMTR_s00014p00246150amborella_trichopodaERN0919477.02767.2297medicago_truncatulaKEH384638069.8246
AMTR_s00014p00246150amborella_trichopodaERN0919473.986565.2027lupinus_angustifoliusOIW1162976.573467.4825
AMTR_s00014p00246150amborella_trichopodaERN0919471.959562.5physcomitrium_patensPp3c9_13000V3.569.381160.2606
AMTR_s00014p00246150amborella_trichopodaERN0919474.662263.5135physcomitrium_patensPp3c15_10210V3.374.915363.7288
AMTR_s00014p00246150amborella_trichopodaERN091947564.1892phaseolus_vulgarisESW2134075.767964.8464
AMTR_s00014p00246150amborella_trichopodaERN0919476.013566.8919pisum_sativumPsat1g009000.1.cds80.645270.9677
AMTR_s00014p00246150amborella_trichopodaERN0919476.351365.5405vigna_angularisKOM4265678.745667.5958
AMTR_s00014p00246150amborella_trichopodaERN0919476.013564.8649vigna_unguiculataVigun05g172400.1.v1.277.054865.7534
AMTR_s00014p00246150amborella_trichopodaERN0919478.716269.2568manihot_esculentaOAY5733880.068770.4467
AMTR_s00014p00246150amborella_trichopodaERN0919466.216256.4189solanum_lycopersicumSolyc07g061960.3.148.395141.2346
AMTR_s00014p00246150amborella_trichopodaERN0919465.878458.1081solanum_lycopersicumSolyc12g011440.2.155.084748.5876
AMTR_s00014p00246150amborella_trichopodaERN0919473.986566.5541capsicum_annuumPHT7697987.678.8
AMTR_s00014p00246150amborella_trichopodaERN0919470.945960.8108capsicum_annuumPHT8661681.081169.4981
AMTR_s00014p00246150amborella_trichopodaERN0919465.202756.4189vigna_radiataVradi05g19100.180.416769.5833
AMTR_s00014p00246150amborella_trichopodaERN091947567.9054sesamum_indicumSIN_1022442.t86.046577.907
AMTR_s00014p00246150amborella_trichopodaERN0919441.216228.0405lactuca_sativacds-PLY88002.156.221238.2488
AMTR_s00014p00246150amborella_trichopodaERN0919476.351367.5676lactuca_sativacds-PLY91305.186.923176.9231
AMTR_s00014p00246150amborella_trichopodaERN0919478.378468.9189helianthus_annuusmRNA:HanXRQr2_Chr10g045071179.452169.863
AMTR_s00014p00246150amborella_trichopodaERN0919473.310863.5135avena_sativa_ot3098cds.AVESA.00001b.r3.3Cg0002036.173.06463.2997
AMTR_s00014p00246150amborella_trichopodaERN0919472.297363.1757avena_sativa_ot3098cds.AVESA.00001b.r3.3Ag0001803.272.542463.3898
AMTR_s00014p00246150amborella_trichopodaERN0919472.297363.1757avena_sativa_ot3098cds.AVESA.00001b.r3.3Dg0001358.172.789163.6054
AMTR_s00014p00246150amborella_trichopodaERN0919474.324364.527lolium_perennecds.KYUSt_chr3.2638339.215734.0463
AMTR_s00014p00246150amborella_trichopodaERN0919467.905458.7838oryza_longistaminataKN540422.1_FGP00458.430250.5814
AMTR_s00014p00246150amborella_trichopodaERN0919472.297363.1757avena_sativa_sangAVESA.00010b.r2.3DG0542730.1.CDS72.789163.6054
AMTR_s00014p00246150amborella_trichopodaERN0919472.297363.1757avena_sativa_sangAVESA.00010b.r2.3AG0442340.1.CDS72.542463.3898
AMTR_s00014p00246150amborella_trichopodaERN0919473.310863.5135avena_sativa_sangAVESA.00010b.r2.3CG0495470.1.CDS73.06463.2997
AMTR_s00014p00246150amborella_trichopodaERN0919473.648763.5135solanum_tuberosumPGSC0003DMT40002207088.617976.4228
AMTR_s00014p00246150amborella_trichopodaERN0919470.945962.5solanum_tuberosumPGSC0003DMT40001817077.777868.5185
AMTR_s00014p00246150amborella_trichopodaERN0919473.310862.8378oryza_rufipogonORUFI01G28710.172.09361.794
AMTR_s00014p00246150amborella_trichopodaERN0919475.337863.8514oryza_brachyanthaOB01G34980.174.086462.7907
AMTR_s00014p00246150amborella_trichopodaERN0919474.324363.8514oryza_glaberrimaORGLA01G0211200.172.131161.9672
AMTR_s00014p00246150amborella_trichopodaERN0919474.324362.1622oryza_punctataOPUNC01G25710.172.131160.3279
AMTR_s00014p00246150amborella_trichopodaERN091947565.2027setaria_italicaKQL0631776.288766.323
AMTR_s00014p00246150amborella_trichopodaERN091947565.2027setaria_viridisTKW1593876.288766.323
AMTR_s00014p00246150amborella_trichopodaERN0919473.310865.2027sorghum_bicolorEES0340173.310865.2027
AMTR_s00014p00246150amborella_trichopodaERN0919467.905460.473triticum_turgidumTRITD3Av1G166060.357.593151.2894
AMTR_s00014p00246150amborella_trichopodaERN0919470.270361.1486triticum_turgidumTRITD3Bv1G141690.154.166747.1354
AMTR_s00014p00246150amborella_trichopodaERN0919474.324365.5405secale_cerealeSECCE3Rv1G0183630.175.342566.4384
AMTR_s00014p00246150amborella_trichopodaERN0919473.648764.8649triticum_aestivumTraesCS3B02G272000.175.172466.2069
AMTR_s00014p00246150amborella_trichopodaERN0919474.662264.8649triticum_aestivumTraesCS3D02G244100.173.91364.2141
AMTR_s00014p00246150amborella_trichopodaERN0919474.324365.5405triticum_aestivumTraesCS3A02G247300.174.074165.3199
AMTR_s00014p00246150amborella_trichopodaERN0919473.310864.527zea_maysZm00001eb157380_P00163.265355.6851
AMTR_s00014p00246150amborella_trichopodaERN0919473.648764.527ananas_comosusAco006229.1.mrna176.223866.7832
AMTR_s00014p00246150amborella_trichopodaERN0919453.378441.8919caenorhabditis_elegansC33A12.7.166.666752.3207
AMTR_s00014p00246150amborella_trichopodaERN0919459.459547.2973drosophila_melanogasterFBpp028842863.082450.1792
AMTR_s00014p00246150amborella_trichopodaERN0919457.432448.3108homo_sapiensENSP0000029214766.929156.2992
AMTR_s00014p00246150amborella_trichopodaERN0919473.986563.5135chenopodium_quinoaAUR62019708-RA:cds85.882473.7255
AMTR_s00014p00246150amborella_trichopodaERN0919469.594657.0946chara_brauniiGBG6576345.076636.9803
AMTR_s00014p00246150amborella_trichopodaERN0919450.337838.8514chara_brauniiGBG7083158.893345.4545
AMTR_s00014p00246150amborella_trichopodaERN0919471.283863.1757arabis_alpinaKFK3571683.399273.913
AMTR_s00014p00246150amborella_trichopodaERN0919439.52731.7568corylus_avellanaCav05g10430.t168.023354.6512
AMTR_s00014p00246150amborella_trichopodaERN0919461.148649.6622corylus_avellanaCav05g10410.t138.510631.2766
AMTR_s00014p00246150amborella_trichopodaERN091947564.1892brachypodium_distachyonKQK0909573.509962.9139
AMTR_s00014p00246150amborella_trichopodaERN0919473.310862.8378oryza_glumipatulaOGLUM01G29640.172.09361.794
AMTR_s00014p00246150amborella_trichopodaERN0919476.689267.9054ipomoea_trilobaitb01g20220.t179.370670.2797
AMTR_s00014p00246150amborella_trichopodaERN0919475.675765.8784kalanchoe_fedtschenkoiKaladp0033s0168.1.v1.18069.6429
AMTR_s00014p00246150amborella_trichopodaERN091947566.5541kalanchoe_fedtschenkoiKaladp0095s0070.1.v1.168.944161.1801
AMTR_s00014p00246150amborella_trichopodaERN0919461.148648.9865galdieria_sulphurariaEME3210271.825457.5397
AMTR_s00014p00246150amborella_trichopodaERN0919469.594658.1081triticum_urartuTuG1812G0300002925.01.T0368.438557.1429
AMTR_s00014p00246150amborella_trichopodaERN0919479.054167.2297eucalyptus_grandisKCW8975977.227765.6766
AMTR_s00014p00246150amborella_trichopodaERN0919477.02767.9054eucalyptus_grandisKCW4463276.510167.4497
AMTR_s00014p00246150amborella_trichopodaERN0919474.662266.2162eucalyptus_grandisKCW6765386.328176.5625
AMTR_s00014p00246150amborella_trichopodaERN0919461.824354.0541cynara_cardunculusKVH9310876.890867.2269
AMTR_s00014p00246150amborella_trichopodaERN0919439.864936.1486trifolium_pratenseTp57577_TGAC_v2_mRNA1993088.059779.8507
AMTR_s00014p00246150amborella_trichopodaERN0919463.513555.0676trifolium_pratenseTp57577_TGAC_v2_mRNA3069278.333367.9167
AMTR_s00014p00246150amborella_trichopodaERN0919439.52735.473gossypium_raimondiiKJB3421086.666777.7778
AMTR_s00014p00246150amborella_trichopodaERN0919437.533.4459gossypium_raimondiiKJB2886387.401677.9528
AMTR_s00014p00246150amborella_trichopodaERN0919478.040569.2568gossypium_raimondiiKJB1289475.490266.9935
AMTR_s00014p00246150amborella_trichopodaERN0919472.635164.1892arabidopsis_lyrataAl_scaffold_0001_480083.011673.3591
AMTR_s00014p00246150amborella_trichopodaERN0919473.310863.5135hordeum_vulgareHORVU.MOREX.r3.3HG0278540.172.818863.0872
AMTR_s00014p00246150amborella_trichopodaERN0919430.405426.6892hordeum_vulgareHORVU.MOREX.r3.3HG0278490.183.333373.1481
AMTR_s00014p00246150amborella_trichopodaERN0919473.310862.8378oryza_barthiiOBART01G25800.172.09361.794
AMTR_s00014p00246150amborella_trichopodaERN0919477.02769.5946asparagus_officinalisONK6996674.02666.8831
AMTR_s00014p00246150amborella_trichopodaERN0919473.648766.2162musa_acuminataMa07_p26860.185.156276.5625
AMTR_s00014p00246150amborella_trichopodaERN0919473.310864.1892musa_acuminataMa01_p21430.188.211477.2358
AMTR_s00014p00246150amborella_trichopodaERN0919472.97363.8514arabidopsis_hallerig30783.t184.37573.8281
AMTR_s00014p00246150amborella_trichopodaERN0919457.432449.3243eragrostis_tefEt_3A_024614.CDS61.151152.518
AMTR_s00014p00246150amborella_trichopodaERN0919468.243260.1351eragrostis_tefEt_3B_029001.CDS71.886163.3452
AMTR_s00014p00246150amborella_trichopodaERN0919478.378467.5676corymbia_citriodoracds-KAF8043507.176.315865.7895
AMTR_s00014p00246150amborella_trichopodaERN0919477.02767.5676corymbia_citriodoracds-KAF7849845.176.510167.1141
AMTR_s00014p00246150amborella_trichopodaERN0919477.02768.9189rosa_chinensisPRQ5212378.892770.5882
AMTR_s00014p00246150amborella_trichopodaERN0919479.054167.5676juglans_regiacds.Jr01_23390_p179.054167.5676
AMTR_s00014p00246150amborella_trichopodaERN0919479.054167.5676juglans_regiacds.Jr01_23400_p179.054167.5676
AMTR_s00014p00246150amborella_trichopodaERN0919479.054167.5676juglans_regiacds.Jr01_23410_p179.054167.5676
AMTR_s00014p00246150amborella_trichopodaERN0919451.351444.5946triticum_dicoccoidesTRIDC3AG037120.371.361561.9718
AMTR_s00014p00246150amborella_trichopodaERN0919473.648764.8649triticum_dicoccoidesTRIDC3BG040820.275.172466.2069
AMTR_s00014p00246150amborella_trichopodaERN0919472.635162.5brassica_oleraceaBo6g031550.145.940239.5299
AMTR_s00014p00246150amborella_trichopodaERN0919473.310863.8514brassica_oleraceaBo3g184140.174.061464.5051
AMTR_s00014p00246150amborella_trichopodaERN0919474.324363.8514oryza_indicaBGIOSGA001060-PA65.476256.25
AMTR_s00014p00246150amborella_trichopodaERN0919458.783847.973ciona_savignyiENSCSAVP0000001633872.199258.9212
AMTR_s00014p00246150amborella_trichopodaERN0919459.797344.9324ciona_savignyiENSCSAVP0000001455162.989347.331
AMTR_s00014p00246150amborella_trichopodaERN0919477.02766.2162dioscorea_rotundataDRNTG_31853.176.767765.9933
AMTR_s00014p00246150amborella_trichopodaERN0919477.364966.2162dioscorea_rotundataDRNTG_25853.177.104465.9933
AMTR_s00014p00246150amborella_trichopodaERN0919473.648762.8378leersia_perrieriLPERR01G22060.172.666762
AMTR_s00014p00246150amborella_trichopodaERN0919468.918961.8243olea_europaeaOE9A050488C173.646266.065
AMTR_s00014p00246150amborella_trichopodaERN0919477.702768.5811olea_europaeaOE9A053115C378.767169.5205
AMTR_s00014p00246150amborella_trichopodaERN0919472.97363.8514actinidia_chinensisPSR9525977.419467.7419
AMTR_s00014p00246150amborella_trichopodaERN0919480.405469.9324prunus_aviumPav_sc0001215.1_g390.1.mk:mrna79.069868.7708
AMTR_s00014p00246150amborella_trichopodaERN0919476.013567.2297quercus_subercds-POE95285.184.586574.812
AMTR_s00014p00246150amborella_trichopodaERN0919478.716269.9324citrus_clementinaESR5552877.152368.543
AMTR_s00014p00246150amborella_trichopodaERN0919467.905458.7838brassica_rapa_ro18A06p001480.1_BraROA.171.530361.9217
AMTR_s00014p00246150amborella_trichopodaERN0919471.621662.8378brassica_rapa_ro18A08p001800.1_BraROA.173.356464.3599
AMTR_s00014p00246150amborella_trichopodaERN0919473.310865.8784daucus_carotaKZM9638677.224269.395
AMTR_s00014p00246150amborella_trichopodaERN0919477.02763.8514nymphaea_colorataNC11G0015000.1:cds63.157952.3546
AMTR_s00014p00246150amborella_trichopodaERN0919469.932455.7432nymphaea_colorataNC11G0015010.1:cds71.87557.2917
AMTR_s00014p00246150amborella_trichopodaERN0919469.256859.4595nymphaea_colorataNC2G0009400.1:cds64.263355.1724
AMTR_s00014p00246150amborella_trichopodaERN0919460.810848.6486ostreococcus_lucimarinusABO9840669.767455.814
AMTR_s00014p00246150amborella_trichopodaERN0919472.635164.527coffea_canephoraCDP0607883.984474.6094
AMTR_s00014p00246150amborella_trichopodaERN0919474.662264.8649aegilops_tauschiiAET3Gv20593900.373.666764
AMTR_s00014p00246150amborella_trichopodaERN0919477.02769.2568pistacia_veracds-EVM0011496.176.767769.0236
AMTR_s00014p00246150amborella_trichopodaERN0919460.135154.0541digitaria_exilisDexi5B01G0022870.1:cds82.407474.0741
AMTR_s00014p00246150amborella_trichopodaERN0919463.513555.7432digitaria_exilisDexi5A01G0022650.1:cds76.422867.0732
AMTR_s00014p00246150amborella_trichopodaERN0919474.324363.8514oryza_sativaOs01t0667200-0172.131161.9672
AMTR_s00014p00246150amborella_trichopodaERN0919474.662265.2027panicum_halliiPUZ5545475.94566.323
AMTR_s00014p00246150amborella_trichopodaERN0919479.391970.2703quercus_lobataQL08p044937:mrna79.93270.7483
AMTR_s00014p00246150amborella_trichopodaERN0919465.540554.7297eragrostis_curvulaTVU3561367.595856.446
AMTR_s00014p00246150amborella_trichopodaERN0919465.540554.7297eragrostis_curvulaTVU0247067.595856.446
AMTR_s00014p00246150amborella_trichopodaERN0919474.662264.8649camelina_sativaCsa14g064170.173.91364.2141
AMTR_s00014p00246150amborella_trichopodaERN0919473.986564.527camelina_sativaCsa03g060850.175.257765.6357
AMTR_s00014p00246150amborella_trichopodaERN0919473.648764.8649camelina_sativaCsa17g094020.173.154464.4295
AMTR_s00014p00246150amborella_trichopodaERN0919470.270360.8108selaginella_moellendorffiiEFJ2770981.889870.8661
AMTR_s00014p00246150amborella_trichopodaERN0919472.297362.5selaginella_moellendorffiiEFJ3723584.25272.8346
AMTR_s00014p00246150amborella_trichopodaERN0919477.364968.2432vitis_viniferaVitvi19g01394_P00180.069970.6294
AMTR_s00014p00246150amborella_trichopodaERN0919479.729769.2568vitis_viniferaVitvi12g00067_P00381.944471.1806
AMTR_s00014p00246150amborella_trichopodaERN0919473.310864.1892eutrema_salsugineumESQ3006575.874166.4336
AMTR_s00014p00246150amborella_trichopodaERN0919474.662265.2027echinochloa_crusgalliscaffold214.105.cds51.877945.3052
AMTR_s00014p00246150amborella_trichopodaERN0919476.013563.8514echinochloa_crusgalliscaffold15.96.cds56.109747.1322
AMTR_s00014p00246150amborella_trichopodaERN091947564.8649echinochloa_crusgalliscaffold18.852.cds55.086847.6427
AMTR_s00014p00246150amborella_trichopodaERN0919475.675769.2568corchorus_capsularisOMO7462987.580.0781
AMTR_s00014p00246150amborella_trichopodaERN0919478.040568.2432corchorus_capsularisOMO9567471.739162.7329
AMTR_s00014p00246150amborella_trichopodaERN0919477.364967.9054fraxinus_excelsiorFRAEX38873_v2_000214120.1.cds79.790970.0348
AMTR_s00014p00246150amborella_trichopodaERN0919479.391971.2838fraxinus_excelsiorFRAEX38873_v2_000087580.1.cds80.479572.2603
AMTR_s00014p00246150amborella_trichopodaERN0919471.621664.527citrullus_lanatusCla97C11G223010.172.108864.966
AMTR_s00014p00246150amborella_trichopodaERN0919473.310862.8378oryza_nivaraONIVA01G29040.172.09361.794

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression