Description

Ensembl ID AMTR_s00012p00263510 Gene ID Accession -
Symbol Alias - Full Name hypothetical protein
Status Confidence Length 681 bases Strand Plus strand
Position AmTr_v1.0_scaffold00012 : 8177600 - 8178280 RNA binding domain Cgr1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ERN08056 Cgr1 PF03879 3.7e-07 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ERN08056 681 226aa ERN08056

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
AMTR_s00012p00263510

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
AMTR_s00012p00263510amborella_trichopodaERN0805660.619550theobroma_cacaoEOY0294370.256457.9487
AMTR_s00012p00263510amborella_trichopodaERN0805648.672641.1504cajanus_cajanC.cajan_36628.t81.481568.8889
AMTR_s00012p00263510amborella_trichopodaERN0805649.557543.3628cajanus_cajanC.cajan_36955.t.cds184.210573.6842
AMTR_s00012p00263510amborella_trichopodaERN0805632.300920.354pisum_sativumPsat4g074560.1.cds142.941227.0588
AMTR_s00012p00263510amborella_trichopodaERN0805634.955826.1062pisum_sativumPsat4g074600.1.cds56.834542.446
AMTR_s00012p00263510amborella_trichopodaERN0805653.539845.5752vigna_angularisKOM4861781.208169.1275
AMTR_s00012p00263510amborella_trichopodaERN0805619.911515.0442solanum_lycopersicumSolyc03g083260.1.1.158.441644.1558
AMTR_s00012p00263510amborella_trichopodaERN0805625.221220.7965vigna_radiataVradi04g04720.159.37548.9583
AMTR_s00012p00263510amborella_trichopodaERN0805660.619549.115corylus_avellanaCav09g04930.t1.cds172.486858.7302
AMTR_s00012p00263510amborella_trichopodaERN0805649.11536.2832rosa_chinensisPRQ2261568.944150.9317
AMTR_s00012p00263510amborella_trichopodaERN0805637.610627.4336rosa_chinensisPRQ2448566.929148.8189
AMTR_s00012p00263510amborella_trichopodaERN0805641.592930.531rosa_chinensisPRQ3060263.513546.6216
AMTR_s00012p00263510amborella_trichopodaERN0805643.805333.1858rosa_chinensisPRQ5463066.44350.3356
AMTR_s00012p00263510amborella_trichopodaERN0805646.460234.5133rosa_chinensisPRQ3343369.078951.3158
AMTR_s00012p00263510amborella_trichopodaERN0805646.902734.0708rosa_chinensisPRQ4886365.838547.8261
AMTR_s00012p00263510amborella_trichopodaERN0805643.362832.7434rosa_chinensisPRQ4907965.771849.6644
AMTR_s00012p00263510amborella_trichopodaERN0805639.380527.8761rosa_chinensisPRQ2648675.423753.3898
AMTR_s00012p00263510amborella_trichopodaERN0805647.787634.5133rosa_chinensisPRQ2156467.080748.4472
AMTR_s00012p00263510amborella_trichopodaERN0805630.973523.8938quercus_subercds-POF12523.173.684256.8421
AMTR_s00012p00263510amborella_trichopodaERN0805660.17746.4602daucus_carotaKZM9816669.035553.2995
AMTR_s00012p00263510amborella_trichopodaERN0805661.504450corchorus_capsularisOMO8554771.282157.9487

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression