Description

Ensembl ID AMTR_s00009p00241540 Gene ID Accession -
Symbol Alias - Full Name RNA-metabolising metallo-beta-lactamase family protein
Status Confidence Length 17679 bases Strand Minus strand
Position AmTr_v1.0_scaffold00009 : 5631173 - 5648851 RNA binding domain Lactamase_B , RMMBL
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ERM95031 Lactamase_B PF00753 2.2e-08 1
ERM95031 RMMBL PF07521 1.4e-06 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ERM95031 2601 866aa ERM95031

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
AMTR_s00009p00241540amborella_trichopodaERM9588626.67613.6872amborella_trichopodaERM9503122.055411.3164
AMTR_s00009p00241540amborella_trichopodaERN0173122.3669.98152amborella_trichopodaERM9503113.97236.23557
AMTR_s00009p00241540amborella_trichopodaERM9464030.736515.0142amborella_trichopodaERM9503125.057712.2402
AMTR_s00009p00241540amborella_trichopodaERM9480830.212815.1773amborella_trichopodaERM9503124.595812.3557
AMTR_s00009p00241540amborella_trichopodaERM9505726.7311.2619amborella_trichopodaERM9503122.74839.5843

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
AMTR_s00009p00241540amborella_trichopodaERM9503161.778353.0023papaver_somniferumRZC5929479.494868.2021
AMTR_s00009p00241540amborella_trichopodaERM9503161.778353.0023papaver_somniferumRZC6064479.376968.1009
AMTR_s00009p00241540amborella_trichopodaERM9503168.937653.2333marchantia_polymorphaPTQ4094466.703951.5084
AMTR_s00009p00241540amborella_trichopodaERM9503181.986170.6697cannabis_sativa_femalecds.evm.model.03.29080.407769.3092
AMTR_s00009p00241540amborella_trichopodaERM9503181.524269.1686ficus_caricaFCD_00014450-RA:cds78.706866.7782
AMTR_s00009p00241540amborella_trichopodaERM9503180.600568.5912beta_vulgarisKMT1121478.78167.0429
AMTR_s00009p00241540amborella_trichopodaERM9503182.563571.4781theobroma_cacaoEOY2245171.215161.6534
AMTR_s00009p00241540amborella_trichopodaERM9503155.542737.6443chlamydomonas_reinhardtiiPNW7208452.282635.4348
AMTR_s00009p00241540amborella_trichopodaERM9503178.983867.4365cucumis_meloMELO3C026230.2.173.786462.9989
AMTR_s00009p00241540amborella_trichopodaERM9503179.330367.4365arabidopsis_thalianaAT5G63420.175.411664.1054
AMTR_s00009p00241540amborella_trichopodaERM9503180.369568.9376populus_trichocarpaPotri.015G093600.1.v4.178.202267.0787
AMTR_s00009p00241540amborella_trichopodaERM9503181.177869.746populus_trichocarpaPotri.012G095800.1.v4.176.746765.9389
AMTR_s00009p00241540amborella_trichopodaERM9503180.946969.3995cucumis_sativusKGN6349277.03366.044
AMTR_s00009p00241540amborella_trichopodaERM9503179.099366.9746brassica_napusCDY4151659.617150.4787
AMTR_s00009p00241540amborella_trichopodaERM9503179.330367.2055brassica_napusCDX8440776.931765.1736
AMTR_s00009p00241540amborella_trichopodaERM9503180.369569.9769prunus_persicaONI0800277.161967.184
AMTR_s00009p00241540amborella_trichopodaERM9503180.369569.515cajanus_cajanC.cajan_11208.t79.816569.0367
AMTR_s00009p00241540amborella_trichopodaERM9503179.676768.0139cajanus_cajanC.cajan_08519.t79.401667.7791
AMTR_s00009p00241540amborella_trichopodaERM9503180.369568.8222malus_domestica_goldenmRNA:MD14G013810075.899764.9945
AMTR_s00009p00241540amborella_trichopodaERM9503180.138669.1686malus_domestica_goldenmRNA:MD06G011660075.681665.3217
AMTR_s00009p00241540amborella_trichopodaERM9503180.48569.6305glycine_maxKRH0392980.114969.3103
AMTR_s00009p00241540amborella_trichopodaERM9503180.946968.5912glycine_maxKRH5420079.298667.1946
AMTR_s00009p00241540amborella_trichopodaERM9503180.946968.9376glycine_maxKRH6374978.941467.2297
AMTR_s00009p00241540amborella_trichopodaERM9503180.369570.0924prunus_dulcisVVA2175479.452169.2922
AMTR_s00009p00241540amborella_trichopodaERM9503168.244860.0462medicago_truncatulaAES9105681.969572.1221
AMTR_s00009p00241540amborella_trichopodaERM9503178.29166.7437medicago_truncatulaAES7234178.200766.6667
AMTR_s00009p00241540amborella_trichopodaERM9503164.203255.6582lupinus_angustifoliusOIV9816977.115166.8516
AMTR_s00009p00241540amborella_trichopodaERM9503111.431910.1617lupinus_angustifoliusOIV9816896.116585.4369
AMTR_s00009p00241540amborella_trichopodaERM9503178.521967.2055lupinus_angustifoliusOIW2147374.235863.5371
AMTR_s00009p00241540amborella_trichopodaERM9503170.207954.9654physcomitrium_patensPp3c20_9790V3.261.538548.1781
AMTR_s00009p00241540amborella_trichopodaERM9503180.023169.2841phaseolus_vulgarisESW2752479.655268.9655
AMTR_s00009p00241540amborella_trichopodaERM9503178.406567.4365phaseolus_vulgarisESW0992477.956467.0494
AMTR_s00009p00241540amborella_trichopodaERM9503176.905365.358pisum_sativumPsat4g062560.1.cds81.418169.1932
AMTR_s00009p00241540amborella_trichopodaERM9503178.752967.552pisum_sativumPsat5g139840.1.cds78.662167.474
AMTR_s00009p00241540amborella_trichopodaERM9503170.207963.164vigna_angularisKOM3270679.373471.4099
AMTR_s00009p00241540amborella_trichopodaERM9503176.09765.0116vigna_angularisKOM3032777.620766.3133
AMTR_s00009p00241540amborella_trichopodaERM9503178.868467.4365vigna_unguiculataVigun09g101800.1.v1.278.505767.1264
AMTR_s00009p00241540amborella_trichopodaERM9503180.48570.4388vigna_unguiculataVigun03g314600.1.v1.278.846269.0045
AMTR_s00009p00241540amborella_trichopodaERM9503180.946969.9769manihot_esculentaOAY3070676.948466.5203
AMTR_s00009p00241540amborella_trichopodaERM9503179.445768.9376solanum_lycopersicumSolyc03g111260.3.180.751270.0704
AMTR_s00009p00241540amborella_trichopodaERM9503179.330368.2448capsicum_annuumPHT8795280.350969.1228
AMTR_s00009p00241540amborella_trichopodaERM9503174.826863.6259vigna_radiataVradi0043s00060.174.226863.1157
AMTR_s00009p00241540amborella_trichopodaERM9503165.473460.1617vigna_radiataVradi07g13590.19082.6984
AMTR_s00009p00241540amborella_trichopodaERM9503176.212567.4365sesamum_indicumSIN_1017304.t79.903170.7022
AMTR_s00009p00241540amborella_trichopodaERM9503175.288764.6651lactuca_sativacds-PLY75638.181.60270.0876
AMTR_s00009p00241540amborella_trichopodaERM9503177.944667.7829helianthus_annuusmRNA:HanXRQr2_Chr03g009511173.6964.083
AMTR_s00009p00241540amborella_trichopodaERM9503177.367265.4734avena_sativa_ot3098cds.AVESA.00001b.r3.6Cg0000690.572.276261.165
AMTR_s00009p00241540amborella_trichopodaERM9503177.136365.358avena_sativa_ot3098cds.AVESA.00001b.r3.6Ag0001703.473.730762.4724
AMTR_s00009p00241540amborella_trichopodaERM9503177.020865.2425avena_sativa_ot3098cds.AVESA.00001b.r3.6Dg0001380.573.946862.6386
AMTR_s00009p00241540amborella_trichopodaERM9503175.635164.4342lolium_perennecds.KYUSt_chr2.3526553.165645.2922
AMTR_s00009p00241540amborella_trichopodaERM9503178.29165.9353oryza_longistaminataKN540104.1_FGP00477.841665.5568
AMTR_s00009p00241540amborella_trichopodaERM9503177.482765.7044avena_sativa_sangAVESA.00010b.r2.6CG1135650.1.CDS75.90564.3665
AMTR_s00009p00241540amborella_trichopodaERM9503177.020865.2425avena_sativa_sangAVESA.00010b.r2.6DG1159700.1.CDS75.968164.3508
AMTR_s00009p00241540amborella_trichopodaERM9503177.136365.358avena_sativa_sangAVESA.00010b.r2.6AG1040580.2.CDS75.73764.1723
AMTR_s00009p00241540amborella_trichopodaERM9503151.270246.3049solanum_tuberosumPGSC0003DMT40003941989.156680.5221
AMTR_s00009p00241540amborella_trichopodaERM9503178.175565.9353oryza_rufipogonORUFI02G20630.277.726865.5568
AMTR_s00009p00241540amborella_trichopodaERM9503177.944665.7044oryza_brachyanthaOB02G27300.177.319665.1776
AMTR_s00009p00241540amborella_trichopodaERM9503178.175566.0508oryza_glaberrimaORGLA02G0167800.177.726865.6716
AMTR_s00009p00241540amborella_trichopodaERM9503178.521966.2818oryza_punctataOPUNC02G17490.178.071265.9013
AMTR_s00009p00241540amborella_trichopodaERM9503169.630560.3926setaria_italicaKQL2993878.007867.6585
AMTR_s00009p00241540amborella_trichopodaERM9503178.29166.6282setaria_viridisTKW3959377.22165.7175
AMTR_s00009p00241540amborella_trichopodaERM9503177.713666.9746sorghum_bicolorEES0466076.477365.9091
AMTR_s00009p00241540amborella_trichopodaERM9503175.288763.7413triticum_turgidumTRITD6Bv1G106910.1075.028863.5213
AMTR_s00009p00241540amborella_trichopodaERM9503176.09764.2032triticum_turgidumTRITD6Av1G102110.172.497361.1661
AMTR_s00009p00241540amborella_trichopodaERM9503176.212564.6651secale_cerealeSECCE6Rv1G0394470.176.477464.8899
AMTR_s00009p00241540amborella_trichopodaERM9503175.866164.2032triticum_aestivumTraesCS6B02G231600.377.294165.4118
AMTR_s00009p00241540amborella_trichopodaERM9503170.669757.5058triticum_aestivumTraesCS6A02G195100.374.362160.5103
AMTR_s00009p00241540amborella_trichopodaERM9503170.669757.7367triticum_aestivumTraesCS6D02G183700.274.362160.7533
AMTR_s00009p00241540amborella_trichopodaERM9503177.944667.0901zea_maysZm00001eb206430_P00377.231166.476
AMTR_s00009p00241540amborella_trichopodaERM9503111.08559.46882zea_maysZm00001eb427760_P00193.203979.6116
AMTR_s00009p00241540amborella_trichopodaERM9503177.598266.7437zea_maysZm00001eb234620_P00176.887966.1327
AMTR_s00009p00241540amborella_trichopodaERM9503115.011512.933zea_maysZm00001eb187210_P00183.333371.7949
AMTR_s00009p00241540amborella_trichopodaERM9503181.755271.3626ananas_comosusAco011421.1.mrna180.637870.3872
AMTR_s00009p00241540amborella_trichopodaERM9503152.309540.4157chara_brauniiGBG7348969.054953.3537
AMTR_s00009p00241540amborella_trichopodaERM9503178.406566.8591arabis_alpinaKFK2805475.781264.6205
AMTR_s00009p00241540amborella_trichopodaERM9503116.281814.3187corylus_avellanaCav03g01750.t172.307763.5897
AMTR_s00009p00241540amborella_trichopodaERM9503169.976959.5843corylus_avellanaCav03g01740.t171.631260.9929
AMTR_s00009p00241540amborella_trichopodaERM9503176.789865.127brachypodium_distachyonKQJ997867664.4571
AMTR_s00009p00241540amborella_trichopodaERM9503178.175565.9353oryza_glumipatulaOGLUM02G19870.177.726865.5568
AMTR_s00009p00241540amborella_trichopodaERM9503178.406565.9353oryza_meridionalisOMERI02G19460.176.984164.7392
AMTR_s00009p00241540amborella_trichopodaERM9503181.524268.5912ipomoea_trilobaitb02g00030.t180.593667.8082
AMTR_s00009p00241540amborella_trichopodaERM9503179.214868.7067kalanchoe_fedtschenkoiKaladp0081s0357.1.v1.180.046769.4282
AMTR_s00009p00241540amborella_trichopodaERM9503176.09764.2032triticum_urartuTuG1812G0600002076.01.T0377.438365.3349
AMTR_s00009p00241540amborella_trichopodaERM9503178.868468.3603eucalyptus_grandisKCW8317679.326468.7573
AMTR_s00009p00241540amborella_trichopodaERM9503162.355753.4642trifolium_pratenseTp57577_TGAC_v2_mRNA2704977.586266.523
AMTR_s00009p00241540amborella_trichopodaERM9503115.011512.933trifolium_pratenseTp57577_TGAC_v2_mRNA2847177.38166.6667
AMTR_s00009p00241540amborella_trichopodaERM9503180.369569.8614gossypium_raimondiiKJB1980680.930270.3488
AMTR_s00009p00241540amborella_trichopodaERM9503181.177870.9007gossypium_raimondiiKJB0802279.524969.457
AMTR_s00009p00241540amborella_trichopodaERM9503179.214867.321arabidopsis_lyratafgenesh1_pg.C_scaffold_800233274.002262.891
AMTR_s00009p00241540amborella_trichopodaERM9503176.789865.2425hordeum_vulgareHORVU.MOREX.r3.6HG0585390.177.146265.5452
AMTR_s00009p00241540amborella_trichopodaERM9503178.0665.9353oryza_barthiiOBART02G19580.177.611965.5568
AMTR_s00009p00241540amborella_trichopodaERM9503179.561270.2079asparagus_officinalisONK7244078.563369.3273
AMTR_s00009p00241540amborella_trichopodaERM9503181.062469.9769musa_acuminataMa09_p30010.179.054168.2432
AMTR_s00009p00241540amborella_trichopodaERM9503179.445767.7829arabidopsis_hallerig12349.t175.521464.4347
AMTR_s00009p00241540amborella_trichopodaERM9503175.288764.6651eragrostis_tefEt_1A_008754.CDS75.990765.2681
AMTR_s00009p00241540amborella_trichopodaERM9503173.787563.3949eragrostis_tefEt_1B_010477.CDS75.710965.0474
AMTR_s00009p00241540amborella_trichopodaERM9503179.907668.8222corymbia_citriodoracds-KAF8036953.176.127665.5666
AMTR_s00009p00241540amborella_trichopodaERM9503179.676768.5912rosa_chinensisPRQ1700877.181266.443
AMTR_s00009p00241540amborella_trichopodaERM9503167.205558.0831juglans_regiacds.Jr09_04850_p178.331167.6985
AMTR_s00009p00241540amborella_trichopodaERM9503181.177870.6697juglans_regiacds.Jr09_04840_p177.252767.2527
AMTR_s00009p00241540amborella_trichopodaERM9503177.944667.2055saccharum_spontaneumSspon.04G0016530-4D-mRNA-1:cds77.054866.4384
AMTR_s00009p00241540amborella_trichopodaERM9503164.318754.9654saccharum_spontaneumSspon.04G0016530-2B-mRNA-1:cds72.905862.3037
AMTR_s00009p00241540amborella_trichopodaERM9503174.711363.3949triticum_dicoccoidesTRIDC6BG035690.377.023865.3571
AMTR_s00009p00241540amborella_trichopodaERM9503175.866164.0878triticum_dicoccoidesTRIDC6AG029350.673.162661.804
AMTR_s00009p00241540amborella_trichopodaERM9503179.445767.2055brassica_oleraceaBo3g103450.159.930350.6969
AMTR_s00009p00241540amborella_trichopodaERM9503178.175565.9353oryza_indicaBGIOSGA008381-PA77.726865.5568
AMTR_s00009p00241540amborella_trichopodaERM9503181.408871.4781dioscorea_rotundataDRNTG_01420.181.034571.1494
AMTR_s00009p00241540amborella_trichopodaERM9503151.616642.2633leersia_perrieriLPERR02G15710.137.721530.8861
AMTR_s00009p00241540amborella_trichopodaERM9503181.408870.7852olea_europaeaOE9A041584C280.204869.7383
AMTR_s00009p00241540amborella_trichopodaERM9503150.923845.1501actinidia_chinensisPSR9593284.482874.9042
AMTR_s00009p00241540amborella_trichopodaERM9503182.217171.709actinidia_chinensisPSS0768380.817370.4881
AMTR_s00009p00241540amborella_trichopodaERM9503150.923846.3049actinidia_chinensisPSR9676187.579.5635
AMTR_s00009p00241540amborella_trichopodaERM9503182.101671.4781actinidia_chinensisPSR8954680.612270.1814
AMTR_s00009p00241540amborella_trichopodaERM9503180.25469.9769prunus_aviumPav_sc0000063.1_g120.1.mk:mrna70.701961.648
AMTR_s00009p00241540amborella_trichopodaERM9503182.101670.6697quercus_subercds-POE96057.178.650467.6991
AMTR_s00009p00241540amborella_trichopodaERM9503179.792168.2448nicotiana_attenuataOIT0477581.389969.6113
AMTR_s00009p00241540amborella_trichopodaERM9503182.44871.4781citrus_clementinaESR5333078.289567.8728
AMTR_s00009p00241540amborella_trichopodaERM9503178.983866.9746brassica_rapa_ro18A06p037310.1_BraROA.174.428763.1121
AMTR_s00009p00241540amborella_trichopodaERM9503179.907668.5912daucus_carotaKZM9315977.927966.8919
AMTR_s00009p00241540amborella_trichopodaERM9503179.907668.4758daucus_carotaKZM8914577.060166.0356
AMTR_s00009p00241540amborella_trichopodaERM9503180.946968.4758nymphaea_colorataNC3G0205760.1:cds81.134368.6343
AMTR_s00009p00241540amborella_trichopodaERM9503138.221729.5612ostreococcus_lucimarinusABO9791380.145361.9855
AMTR_s00009p00241540amborella_trichopodaERM9503181.524270.3233coffea_canephoraCDP1003379.504568.5811
AMTR_s00009p00241540amborella_trichopodaERM9503175.981564.3187aegilops_tauschiiAET6Gv20536500.476.869265.0701
AMTR_s00009p00241540amborella_trichopodaERM9503180.48568.9376pistacia_veracds-EVM0015550.180.392268.8581
AMTR_s00009p00241540amborella_trichopodaERM9503182.794570.6697pistacia_veracds-EVM0020849.179.314267.6991
AMTR_s00009p00241540amborella_trichopodaERM9503159.699851.1547digitaria_exilisDexi1B01G0015260.1:cds79.78468.3642
AMTR_s00009p00241540amborella_trichopodaERM9503159.468850.9238digitaria_exilisDexi1A01G0016340.1:cds72.331561.9382
AMTR_s00009p00241540amborella_trichopodaERM9503178.175565.9353oryza_sativaOs02t0539600-0176.757464.7392
AMTR_s00009p00241540amborella_trichopodaERM9503177.944666.8591panicum_halliiPUZ7599677.319666.323
AMTR_s00009p00241540amborella_trichopodaERM9503182.332671.0162quercus_lobataQL10p004119:mrna78.871768.031
AMTR_s00009p00241540amborella_trichopodaERM9503144.572835.4503quercus_lobataQL10p004182:mrna71.086656.5378
AMTR_s00009p00241540amborella_trichopodaERM9503175.173264.6651eragrostis_curvulaTVU2981470.454560.6061
AMTR_s00009p00241540amborella_trichopodaERM9503179.214867.321camelina_sativaCsa18g036940.176.30764.8498
AMTR_s00009p00241540amborella_trichopodaERM9503179.214867.321camelina_sativaCsa11g100280.176.30764.8498
AMTR_s00009p00241540amborella_trichopodaERM9503171.478161.6628camelina_sativaCsa02g071840.176.608966.0891
AMTR_s00009p00241540amborella_trichopodaERM9503167.55252.8868selaginella_moellendorffiiEFJ2144470.059954.8503
AMTR_s00009p00241540amborella_trichopodaERM9503167.205552.6559selaginella_moellendorffiiEFJ2380470.205155.006
AMTR_s00009p00241540amborella_trichopodaERM9503182.101671.94vitis_viniferaVitvi17g00132_P00180.248370.316
AMTR_s00009p00241540amborella_trichopodaERM9503179.330368.0139eutrema_salsugineumESQ315657564.3013
AMTR_s00009p00241540amborella_trichopodaERM9503177.367266.5127echinochloa_crusgalliscaffold5.312.cds77.011566.2069
AMTR_s00009p00241540amborella_trichopodaERM9503177.829166.8591echinochloa_crusgalliscaffold17.764.cds77.829166.8591
AMTR_s00009p00241540amborella_trichopodaERM9503177.944667.0901echinochloa_crusgalliscaffold127.80.cds77.586266.7816
AMTR_s00009p00241540amborella_trichopodaERM9503181.639770.6697corchorus_capsularisOMO8406779.88769.1525
AMTR_s00009p00241540amborella_trichopodaERM9503180.600569.746fraxinus_excelsiorFRAEX38873_v2_000230330.1.cds79.318268.6364
AMTR_s00009p00241540amborella_trichopodaERM9503181.177870.7852fraxinus_excelsiorFRAEX38873_v2_000043830.2.cds79.795769.58
AMTR_s00009p00241540amborella_trichopodaERM9503180.715970.0924citrullus_lanatusCla97C06G127520.177.494567.2949
AMTR_s00009p00241540amborella_trichopodaERM9503178.175565.9353oryza_nivaraONIVA03G19920.277.726865.5568

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression