Description

Ensembl ID AMTR_s00006p00246400 Gene ID Accession -
Symbol Alias - Full Name D-aminoacyl-tRNA deacylases
Status Confidence Length 20495 bases Strand Plus strand
Position AmTr_v1.0_scaffold00006 : 6013822 - 6034316 RNA binding domain tRNA_deacylase
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ERN05734 tRNA_deacylase PF04414 7.5e-68 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ERN05734 951 316aa ERN05734

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
AMTR_s00006p00246400

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
AMTR_s00006p00246400amborella_trichopodaERN0573483.860873.1013papaver_somniferumRZC7219973.002863.6364
AMTR_s00006p00246400amborella_trichopodaERN0573476.582364.8734marchantia_polymorphaPTQ4777572.023861.0119
AMTR_s00006p00246400amborella_trichopodaERN0573480.379769.3038cannabis_sativa_femalecds.evm.model.10.89080.634969.5238
AMTR_s00006p00246400amborella_trichopodaERN0573479.746868.038ficus_caricaFCD_00008092-RA:cds79.746868.038
AMTR_s00006p00246400amborella_trichopodaERN0573480.063366.1392beta_vulgarisKMT0871880.317566.3492
AMTR_s00006p00246400amborella_trichopodaERN0573459.177248.7342theobroma_cacaoEOY2215157.894747.678
AMTR_s00006p00246400amborella_trichopodaERN0573479.746867.7215theobroma_cacaoEOY0158575.675764.2643
AMTR_s00006p00246400amborella_trichopodaERN0573479.746868.3544cucumis_meloMELO3C011402.2.180.511269.0096
AMTR_s00006p00246400amborella_trichopodaERN0573477.531667.0886arabidopsis_thalianaAT2G03800.267.86758.7258
AMTR_s00006p00246400amborella_trichopodaERN0573482.278573.1013populus_trichocarpaPotri.015G048700.2.v4.182.278573.1013
AMTR_s00006p00246400amborella_trichopodaERN0573480.696269.6203cucumis_sativusKGN4767280.441669.4006
AMTR_s00006p00246400amborella_trichopodaERN0573478.797568.9873brassica_junceacds.BjuB02g55400S70.538261.7564
AMTR_s00006p00246400amborella_trichopodaERN0573478.797568.6709brassica_junceacds.BjuA06g05310S71.142962
AMTR_s00006p00246400amborella_trichopodaERN0573478.164668.6709brassica_junceacds.BjuB04g46770S79.166769.5513
AMTR_s00006p00246400amborella_trichopodaERN0573477.848168.038brassica_napusCDY4571969.295860.5634
AMTR_s00006p00246400amborella_trichopodaERN0573478.164668.038brassica_napusCDY4969279.166768.9103
AMTR_s00006p00246400amborella_trichopodaERN0573478.48168.6709brassica_napusCDX8352279.487269.5513
AMTR_s00006p00246400amborella_trichopodaERN0573478.48168.038brassica_napusCDY4806379.487268.9103
AMTR_s00006p00246400amborella_trichopodaERN0573445.886139.8734brassica_napusCDY6530058.232950.6024
AMTR_s00006p00246400amborella_trichopodaERN0573479.746867.7215prunus_persicaONI3111567.741957.5269
AMTR_s00006p00246400amborella_trichopodaERN0573478.797566.4557cajanus_cajanC.cajan_10412.t78.797566.4557
AMTR_s00006p00246400amborella_trichopodaERN0573479.430469.3038malus_domestica_goldenmRNA:MD16G004970068.392459.673
AMTR_s00006p00246400amborella_trichopodaERN0573479.113969.9367malus_domestica_goldenmRNA:MD13G004990077.639868.6335
AMTR_s00006p00246400amborella_trichopodaERN0573462.025353.481malus_domestica_goldenmRNA:MD16G004930066.440757.2881
AMTR_s00006p00246400amborella_trichopodaERN0573478.48165.5063glycine_maxKRH5944465.957455.0532
AMTR_s00006p00246400amborella_trichopodaERN0573479.113967.4051prunus_dulcisVVA2418567.204357.2581
AMTR_s00006p00246400amborella_trichopodaERN0573478.48166.1392medicago_truncatulaAET0320479.233266.7732
AMTR_s00006p00246400amborella_trichopodaERN0573478.164665.8228lupinus_angustifoliusOIV9828377.429565.2038
AMTR_s00006p00246400amborella_trichopodaERN0573477.531662.6582lupinus_angustifoliusOIW1415476.802562.069
AMTR_s00006p00246400amborella_trichopodaERN0573479.430466.1392phaseolus_vulgarisESW2836566.402155.291
AMTR_s00006p00246400amborella_trichopodaERN0573479.113966.4557pisum_sativumPsat4g122760.1.cds70.02858.8235
AMTR_s00006p00246400amborella_trichopodaERN0573479.113966.4557pisum_sativumPsat4g118760.1.cds68.870557.8512
AMTR_s00006p00246400amborella_trichopodaERN0573479.430466.1392vigna_angularisKOM3201466.933355.7333
AMTR_s00006p00246400amborella_trichopodaERN0573479.430466.1392vigna_unguiculataVigun03g220200.1.v1.266.933355.7333
AMTR_s00006p00246400amborella_trichopodaERN0573479.746869.3038manihot_esculentaOAY5018779.746869.3038
AMTR_s00006p00246400amborella_trichopodaERN0573479.746869.3038manihot_esculentaOAY4746079.245368.8679
AMTR_s00006p00246400amborella_trichopodaERN0573481.96273.1013capsicum_annuumPHT7957973.789265.812
AMTR_s00006p00246400amborella_trichopodaERN0573468.670958.2278vigna_radiataVradi07g02900.165.957455.9271
AMTR_s00006p00246400amborella_trichopodaERN0573478.164670.5696sesamum_indicumSIN_1026385.t69.577562.8169
AMTR_s00006p00246400amborella_trichopodaERN0573473.101361.7089sesamum_indicumSIN_1000383.t64.345454.3175
AMTR_s00006p00246400amborella_trichopodaERN0573473.734262.6582lactuca_sativacds-PLY83939.176.393464.918
AMTR_s00006p00246400amborella_trichopodaERN0573483.860873.4177lactuca_sativacds-PLY92960.178.171168.4366
AMTR_s00006p00246400amborella_trichopodaERN0573484.493774.6835helianthus_annuusmRNA:HanXRQr2_Chr05g023239181.15571.7325
AMTR_s00006p00246400amborella_trichopodaERN0573476.582363.924helianthus_annuusmRNA:HanXRQr2_Chr12g053589176.582363.924
AMTR_s00006p00246400amborella_trichopodaERN0573477.215267.0886solanum_tuberosumPGSC0003DMT40000487376.971666.877
AMTR_s00006p00246400amborella_trichopodaERN0573482.278573.4177solanum_tuberosumPGSC0003DMT40001044882.539773.6508
AMTR_s00006p00246400amborella_trichopodaERN0573451.898747.1519solanum_tuberosumPGSC0003DMT40001044385.863978.0105
AMTR_s00006p00246400amborella_trichopodaERN0573474.683560.7595chenopodium_quinoaAUR62007873-RA:cds80.272165.3061
AMTR_s00006p00246400amborella_trichopodaERN0573474.683560.1266chenopodium_quinoaAUR62003058-RA:cds80.272164.6258
AMTR_s00006p00246400amborella_trichopodaERN0573470.253255.0633chara_brauniiGBG8206661.15747.9339
AMTR_s00006p00246400amborella_trichopodaERN0573477.531666.4557arabis_alpinaKFK3352978.525667.3077
AMTR_s00006p00246400amborella_trichopodaERN0573480.063371.2025corylus_avellanaCav04g19490.t170.083162.3269
AMTR_s00006p00246400amborella_trichopodaERN0573478.797565.1899ipomoea_trilobaitb14g02830.t178.797565.1899
AMTR_s00006p00246400amborella_trichopodaERN0573485.126675ipomoea_trilobaitb11g13570.t271.925163.369
AMTR_s00006p00246400amborella_trichopodaERN0573476.898763.6076kalanchoe_fedtschenkoiKaladp0071s0040.1.v1.176.656263.4069
AMTR_s00006p00246400amborella_trichopodaERN0573470.886158.5443eucalyptus_grandisKCW4893980.866466.787
AMTR_s00006p00246400amborella_trichopodaERN0573477.848166.7721eucalyptus_grandisKCW5161177.602566.5615
AMTR_s00006p00246400amborella_trichopodaERN0573481.329171.8354cynara_cardunculusKVH9930279.076969.8462
AMTR_s00006p00246400amborella_trichopodaERN0573467.088657.5949cynara_cardunculusKVI0529874.125963.6364
AMTR_s00006p00246400amborella_trichopodaERN0573479.746868.9873gossypium_raimondiiKJB3997379.245368.5535
AMTR_s00006p00246400amborella_trichopodaERN0573480.696268.9873gossypium_raimondiiKJB3051379.687568.125
AMTR_s00006p00246400amborella_trichopodaERN0573478.164668.038arabidopsis_lyrataAl_scaffold_0003_295377.91867.8233
AMTR_s00006p00246400amborella_trichopodaERN0573477.848167.7215arabidopsis_lyratafgenesh1_pm.C_scaffold_500021968.14459.2798
AMTR_s00006p00246400amborella_trichopodaERN0573478.164667.4051arabidopsis_hallerig23562.t177.91867.1924
AMTR_s00006p00246400amborella_trichopodaERN0573478.164668.3544corymbia_citriodoracds-KAF8027519.178.164668.3544
AMTR_s00006p00246400amborella_trichopodaERN0573481.645669.6203corymbia_citriodoracds-KAF8005763.181.904869.8413
AMTR_s00006p00246400amborella_trichopodaERN0573478.48168.038corymbia_citriodoracds-KAF8039198.178.48168.038
AMTR_s00006p00246400amborella_trichopodaERN0573476.265865.5063rosa_chinensisPRQ4056168.857159.1429
AMTR_s00006p00246400amborella_trichopodaERN0573479.430469.9367juglans_regiacds.Jr13_14000_p179.179869.7161
AMTR_s00006p00246400amborella_trichopodaERN0573478.48168.6709brassica_oleraceaBo7g081600.179.487269.5513
AMTR_s00006p00246400amborella_trichopodaERN0573477.848167.7215brassica_oleraceaBo2g137190.169.295860.2817
AMTR_s00006p00246400amborella_trichopodaERN0573481.96273.1013dioscorea_rotundataDRNTG_13074.181.703572.8707
AMTR_s00006p00246400amborella_trichopodaERN0573477.215265.8228olea_europaeaOE9A021931C176.971665.6151
AMTR_s00006p00246400amborella_trichopodaERN0573484.177274.0506olea_europaeaOE9A102702C284.177274.0506
AMTR_s00006p00246400amborella_trichopodaERN0573452.215246.2025olea_europaeaOE9A118531C186.842176.8421
AMTR_s00006p00246400amborella_trichopodaERN0573485.44375actinidia_chinensisPSS0801585.714375.2381
AMTR_s00006p00246400amborella_trichopodaERN0573478.797571.519actinidia_chinensisPSR8819378.797571.519
AMTR_s00006p00246400amborella_trichopodaERN0573478.797566.4557prunus_aviumPav_sc0001191.1_g290.1.mk:mrna66.047755.7029
AMTR_s00006p00246400amborella_trichopodaERN0573481.645670.5696quercus_subercds-POF04671.180.877769.906
AMTR_s00006p00246400amborella_trichopodaERN0573478.48166.7721nicotiana_attenuataOIT1982878.233466.5615
AMTR_s00006p00246400amborella_trichopodaERN0573480.696269.6203citrus_clementinaESR5109580.441669.4006
AMTR_s00006p00246400amborella_trichopodaERN0573475.316563.924brassica_rapa_ro18A06p051550.1_BraROA.167.231657.0621
AMTR_s00006p00246400amborella_trichopodaERN0573472.151962.6582brassica_rapa_ro18A02p048280.1_BraROA.164.589256.0907
AMTR_s00006p00246400amborella_trichopodaERN0573478.164665.5063daucus_carotaKZN0637278.412765.7143
AMTR_s00006p00246400amborella_trichopodaERN0573484.177272.1519daucus_carotaKZN0281963.942354.8077
AMTR_s00006p00246400amborella_trichopodaERN0573480.379768.9873nymphaea_colorataNC3G0242990.1:cds64.63155.4707
AMTR_s00006p00246400amborella_trichopodaERN0573479.430467.0886coffea_canephoraCDP0047878.930866.6667
AMTR_s00006p00246400amborella_trichopodaERN0573479.430468.9873pistacia_veracds-EVM0024605.178.930868.5535
AMTR_s00006p00246400amborella_trichopodaERN0573479.430468.9873pistacia_veracds-EVM0025185.179.430468.9873
AMTR_s00006p00246400amborella_trichopodaERN0573452.215246.8354camelina_sativaCsa06g004690.164.453157.8125
AMTR_s00006p00246400amborella_trichopodaERN0573478.164668.038camelina_sativaCsa09g007150.169.971760.9065
AMTR_s00006p00246400amborella_trichopodaERN0573478.164668.038camelina_sativaCsa04g009380.168.421159.5568
AMTR_s00006p00246400amborella_trichopodaERN0573485.126673.4177vitis_viniferaVitvi17g00451_P00175.350164.986
AMTR_s00006p00246400amborella_trichopodaERN0573478.797568.6709eutrema_salsugineumESQ3295879.807769.5513
AMTR_s00006p00246400amborella_trichopodaERN0573477.848166.1392corchorus_capsularisOMO9361043.00736.5385
AMTR_s00006p00246400amborella_trichopodaERN0573481.96270.5696corchorus_capsularisOMO5875382.222270.7936
AMTR_s00006p00246400amborella_trichopodaERN0573478.164666.7721fraxinus_excelsiorFRAEX38873_v2_000233380.1.cds77.91866.5615
AMTR_s00006p00246400amborella_trichopodaERN0573481.329168.9873citrullus_lanatusCla97C08G153480.181.072668.7697

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression