| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | AMTR_s00003p00231040 | Gene ID |
|
Accession |
- |
| Symbol |
|
Alias |
- |
Full Name |
hypothetical protein
|
| Status |
Confidence |
Length |
1212 bases |
Strand |
Minus strand |
| Position |
AmTr_v1.0_scaffold00003 : 4975341 - 4976552 |
RNA binding domain |
DNA_pol_A_exo1 |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ERN03306 |
DNA_pol_A_exo1 |
PF01612 |
1.1e-20 |
1 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| - |
ERN03306 |
1212 |
403aa |
ERN03306 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN16792 | 19.965 | 11.5587 | amborella_trichopoda | ERN03306 | 28.2878 | 16.3772 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN15911 | 42.7184 | 25.2427 | amborella_trichopoda | ERN03306 | 21.8362 | 12.9032 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 26.0546 | 16.8734 | papaver_somniferum | RZC64653 | 55.2632 | 35.7895 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 20.0993 | 11.6625 | papaver_somniferum | RZC64652 | 42.8571 | 24.8677 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 34.4913 | 21.34 | papaver_somniferum | RZC43882 | 17.9587 | 11.1111 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 33.4988 | 21.34 | marchantia_polymorpha | PTQ50435 | 20.4545 | 13.0303 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 25.3102 | 15.6328 | chlamydomonas_reinhardtii | PNW77777 | 11.3586 | 7.01559 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 32.7543 | 19.1067 | chlamydomonas_reinhardtii | PNW83497 | 13.4694 | 7.85714 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 28.7841 | 17.1216 | cajanus_cajan | C.cajan_31639.t.cds1 | 56.8627 | 33.8235 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 32.0099 | 19.603 | glycine_max | KRH26003 | 62.0192 | 37.9808 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 31.2655 | 19.603 | physcomitrium_patens | Pp3c16_24370V3.1 | 28 | 17.5556 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 24.5658 | 12.6551 | phaseolus_vulgaris | ESW29412 | 58.2353 | 30 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 29.2804 | 16.129 | vigna_angularis | KOM45880 | 57.561 | 31.7073 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 29.5285 | 16.3772 | vigna_unguiculata | Vigun02g052600.1.v1.2.CDS.1 | 57.2115 | 31.7308 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 25.062 | 16.129 | solanum_lycopersicum | Solyc01g100670.1.1.1 | 61.5854 | 39.6341 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 27.7916 | 18.1141 | lolium_perenne | cds.KYUSt_chr7.11015 | 56 | 36.5 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 27.7916 | 18.1141 | lolium_perenne | cds.KYUSt_chr7.11012 | 56 | 36.5 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 18.6104 | 11.6625 | oryza_longistaminata | KN538863.1_FGP034 | 53.1915 | 33.3333 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 28.536 | 18.3623 | avena_sativa_sang | AVESA.00010b.r2.4CG1282400.1.CDS.1 | 57.5 | 37 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 27.5434 | 17.1216 | oryza_rufipogon | ORUFI01G13540.1 | 38.5417 | 23.9583 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 28.7841 | 18.6104 | oryza_rufipogon | ORUFI01G13550.1 | 57.7114 | 37.3134 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 26.5509 | 18.1141 | oryza_brachyantha | OB01G22310.1 | 56.0209 | 38.2199 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 26.0546 | 17.1216 | oryza_glaberrima | ORGLA01G0105700.1 | 48.3871 | 31.7972 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 28.7841 | 18.3623 | oryza_glaberrima | ORGLA01G0105800.1 | 57.7114 | 36.8159 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 28.7841 | 18.6104 | oryza_punctata | OPUNC01G12320.1 | 57.7114 | 37.3134 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 25.5583 | 16.6253 | setaria_italica | KQL03495 | 48.1308 | 31.3084 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 29.0323 | 18.8586 | setaria_italica | KQL03494 | 56.25 | 36.5385 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 28.536 | 18.6104 | setaria_viridis | TKW12277 | 53.7383 | 35.0467 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 29.0323 | 19.1067 | sorghum_bicolor | KXG32361 | 53.4247 | 35.1598 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 27.7916 | 18.6104 | triticum_turgidum | TRITD3Bv1G046010.1 | 56 | 37.5 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 27.5434 | 18.6104 | triticum_turgidum | TRITD3Av1G037000.1 | 55.2239 | 37.3134 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 27.7916 | 18.1141 | secale_cereale | SECCE3Rv1G0162620.1.CDS.1 | 56 | 36.5 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 27.7916 | 18.6104 | triticum_aestivum | TraesCS3D02G118000.1.cds1 | 56 | 37.5 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 27.5434 | 18.3623 | triticum_aestivum | TraesCS3B02G135200.1.cds1 | 55.5 | 37 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 26.5509 | 17.6179 | zea_mays | Zm00001eb340390_P001 | 54.8718 | 36.4103 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 21.5881 | 13.3995 | drosophila_melanogaster | FBpp0081878 | 14.9228 | 9.26244 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 24.8139 | 14.8883 | homo_sapiens | ENSP00000510642 | 16.1031 | 9.66184 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 37.469 | 21.8362 | chara_braunii | GBG78331 | 29.783 | 17.357 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 27.7916 | 17.6179 | brachypodium_distachyon | KQK23303 | 56.2814 | 35.6784 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 27.0471 | 18.1141 | oryza_glumipatula | OGLUM01G14060.1 | 56.4767 | 37.8238 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 26.0546 | 16.3772 | cyanidioschyzon_merolae | CMD071CT | 8.57843 | 5.39216 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 25.062 | 16.129 | oryza_barthii | OBART01G12620.1 | 51.269 | 32.9949 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 28.7841 | 18.3623 | oryza_barthii | OBART01G12630.1 | 57.7114 | 36.8159 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 25.062 | 16.129 | musa_acuminata | Ma01_p06560.1 | 53.1579 | 34.2105 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 26.3027 | 17.6179 | eragrostis_tef | Et_3B_031742.CDS1 | 54.359 | 36.4103 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 26.5509 | 16.129 | eragrostis_tef | Et_10B_004406.CDS1 | 45.5319 | 27.6596 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 30.0248 | 19.3548 | eragrostis_tef | Et_3A_026596.CDS1 | 58.4541 | 37.6812 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 25.8065 | 16.3772 | saccharum_spontaneum | Sspon.03G0015580-3C-mRNA-1.cds1 | 49.7608 | 31.5789 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 27.7916 | 18.6104 | triticum_dicoccoides | TRIDC3BG018880.1 | 55.4455 | 37.1287 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 27.5434 | 18.6104 | triticum_dicoccoides | TRIDC3AG014380.1 | 54.6798 | 36.9458 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 28.7841 | 18.6104 | oryza_indica | BGIOSGA001821-PA | 57.7114 | 37.3134 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 27.5434 | 17.3697 | oryza_indica | BGIOSGA001822-PA | 38.5417 | 24.3056 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 28.7841 | 18.8586 | dioscorea_rotundata | DRNTG_18114.1.cds1 | 56.0386 | 36.715 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 28.7841 | 18.8586 | leersia_perrieri | LPERR01G11560.1 | 58.2915 | 38.191 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 21.34 | 14.3921 | olea_europaea | OE9A110941C1 | 53.0864 | 35.8025 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 33.2506 | 21.5881 | nymphaea_colorata | NC10G0044860.1:cds | 59.8214 | 38.8393 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 31.0174 | 19.1067 | nymphaea_colorata | NC5G0160650.1:cds | 57.3395 | 35.3211 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 23.3251 | 13.6476 | ostreococcus_lucimarinus | ABO99938 | 24.1645 | 14.1388 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 23.8213 | 14.1439 | ostreococcus_lucimarinus | ABO98757 | 24.6787 | 14.653 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 25.5583 | 16.129 | ostreococcus_lucimarinus | ABO94918 | 16.7752 | 10.5863 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 27.7916 | 18.6104 | aegilops_tauschii | AET3Gv20255100.1 | 55.4455 | 37.1287 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 28.7841 | 18.6104 | oryza_sativa | Os01t0300000-01 | 57.7114 | 37.3134 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 26.3027 | 16.8734 | oryza_sativa | Os01t0299700-01 | 44.7257 | 28.692 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 25.8065 | 16.8734 | panicum_hallii | PUZ57075 | 48.1481 | 31.4815 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 26.799 | 16.6253 | panicum_hallii | PUZ57074 | 51.9231 | 32.2115 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 29.0323 | 19.1067 | eragrostis_curvula | TVU21250 | 54.4186 | 35.814 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 29.0323 | 19.1067 | eragrostis_curvula | TVT96802 | 56.25 | 37.0192 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 26.799 | 16.129 | eragrostis_curvula | TVU49982 | 45.9574 | 27.6596 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 29.7767 | 16.6253 | selaginella_moellendorffii | EFJ11270 | 65.2174 | 36.413 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 29.5285 | 16.6253 | selaginella_moellendorffii | EFJ15539 | 64.6739 | 36.413 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 24.0695 | 14.6402 | vitis_vinifera | Vitvi14g02466_P001 | 62.1795 | 37.8205 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 28.536 | 18.6104 | echinochloa_crusgalli | scaffold177.165.cds | 14.974 | 9.76562 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 25.8065 | 16.6253 | echinochloa_crusgalli | scaffold150.148.cds | 48.5981 | 31.3084 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 27.7916 | 18.1141 | oryza_nivara | ONIVA01G15020.1 | 57.732 | 37.6289 |
| AMTR_s00003p00231040 | amborella_trichopoda | ERN03306 | 27.0471 | 17.1216 | oryza_nivara | ONIVA01G14990.1 | 37.8472 | 23.9583 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
