Description

Ensembl ID AMTR_s00002p00146270 Gene ID Accession -
Symbol Alias - Full Name P-loop containing nucleoside triphosphate hydrolases superfamily protein
Status Confidence Length 8375 bases Strand Plus strand
Position AmTr_v1.0_scaffold00002 : 2135975 - 2144349 RNA binding domain NOG1 , MMR_HSR1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ERN01034 NOG1 PF06858 1e-18 1
ERN01034 MMR_HSR1 PF01926 4.2e-17 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ERN01034 1326 441aa ERN01034

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
AMTR_s00002p00146270amborella_trichopodaERN1479020.059410.847amborella_trichopodaERN0103430.612216.5533
AMTR_s00002p00146270amborella_trichopodaERN1619720.20810.847amborella_trichopodaERN0103430.83916.5533
AMTR_s00002p00146270amborella_trichopodaERN0023713.97066.43382amborella_trichopodaERN0103417.23367.93651
AMTR_s00002p00146270amborella_trichopodaERN1530824.81211.5288amborella_trichopodaERN0103422.44910.4308
AMTR_s00002p00146270amborella_trichopodaERM9436023.943712.1127amborella_trichopodaERN0103419.27449.75057
AMTR_s00002p00146270amborella_trichopodaERN1693916.87199.60591amborella_trichopodaERN0103431.065817.6871
AMTR_s00002p00146270amborella_trichopodaERN0127228.039214.7059amborella_trichopodaERN0103432.426317.0068
AMTR_s00002p00146270amborella_trichopodaERN0974323.327313.0199amborella_trichopodaERN0103429.251716.3265

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
AMTR_s00002p00146270amborella_trichopodaERN0103450.793741.0431papaver_somniferumRZC6930774.172259.9338
AMTR_s00002p00146270amborella_trichopodaERN0103460.317546.712marchantia_polymorphaPTQ3661852.777840.873
AMTR_s00002p00146270amborella_trichopodaERN0103475.963761.4512cannabis_sativa_femalecds.evm.model.01.162075.112160.7623
AMTR_s00002p00146270amborella_trichopodaERN0103476.870860.9977ficus_caricaFCD_00018550-RA:cds75.669660.0446
AMTR_s00002p00146270amborella_trichopodaERN0103475.73761.4512beta_vulgarisKMS9986574.887960.7623
AMTR_s00002p00146270amborella_trichopodaERN0103475.510261.2245theobroma_cacaoEOY0222375.854261.5034
AMTR_s00002p00146270amborella_trichopodaERN0103474.376459.6372cucumis_meloMELO3C006259.2.169.344655.6025
AMTR_s00002p00146270amborella_trichopodaERN0103474.829958.7302arabidopsis_thalianaAT1G80770.668.464753.7344
AMTR_s00002p00146270amborella_trichopodaERN0103476.64463.4921populus_trichocarpaPotri.002G134900.1.v4.175.784862.7803
AMTR_s00002p00146270amborella_trichopodaERN0103474.603259.8639cucumis_sativusKGN5667074.099159.4595
AMTR_s00002p00146270amborella_trichopodaERN0103474.376459.1837brassica_junceacds.BjuB06g14260S73.051258.1292
AMTR_s00002p00146270amborella_trichopodaERN0103474.376458.9569brassica_napusCDX6796667.908953.8302
AMTR_s00002p00146270amborella_trichopodaERN0103474.376458.9569brassica_napusCDX7935567.908953.8302
AMTR_s00002p00146270amborella_trichopodaERN0103474.603258.7302brassica_napusCDX8734172.307756.9231
AMTR_s00002p00146270amborella_trichopodaERN0103478.458163.2653prunus_persicaONI2221278.636463.4091
AMTR_s00002p00146270amborella_trichopodaERN0103475.056759.8639cajanus_cajanC.cajan_32813.t76.798161.2529
AMTR_s00002p00146270amborella_trichopodaERN0103475.963759.6372malus_domestica_goldenmRNA:MD02G018920078.823561.8824
AMTR_s00002p00146270amborella_trichopodaERN0103476.190559.1837malus_domestica_goldenmRNA:MD07G007100075.675758.7838
AMTR_s00002p00146270amborella_trichopodaERN0103473.922959.1837glycine_maxKRH4653073.423458.7838
AMTR_s00002p00146270amborella_trichopodaERN0103478.458163.2653prunus_dulcisVVA3597878.636463.4091
AMTR_s00002p00146270amborella_trichopodaERN0103473.469459.4104medicago_truncatulaKEH2246274.311960.0917
AMTR_s00002p00146270amborella_trichopodaERN0103475.963760.0907lupinus_angustifoliusOIW0762576.309860.3645
AMTR_s00002p00146270amborella_trichopodaERN0103460.090747.8458physcomitrium_patensPp3c1_10540V3.252.475241.7822
AMTR_s00002p00146270amborella_trichopodaERN0103423.809518.3673phaseolus_vulgarisESW1275472.413855.8621
AMTR_s00002p00146270amborella_trichopodaERN0103450.340140.8163phaseolus_vulgarisESW1275372.786959.0164
AMTR_s00002p00146270amborella_trichopodaERN0103465.532953.5147pisum_sativumPsat3g155960.1.cds82.571467.4286
AMTR_s00002p00146270amborella_trichopodaERN0103473.469458.5034vigna_angularisKOM4240674.482859.3103
AMTR_s00002p00146270amborella_trichopodaERN0103473.469459.1837vigna_unguiculataVigun05g145500.2.v1.274.482860
AMTR_s00002p00146270amborella_trichopodaERN0103474.603262.8118manihot_esculentaOAY4947772.787661.2832
AMTR_s00002p00146270amborella_trichopodaERN0103477.097561.9048solanum_lycopersicumSolyc09g090460.3.177.272762.0455
AMTR_s00002p00146270amborella_trichopodaERN0103478.004562.3583capsicum_annuumPHT7014977.828162.2172
AMTR_s00002p00146270amborella_trichopodaERN0103469.16156.4626vigna_radiataVradi05g17380.178.205163.8462
AMTR_s00002p00146270amborella_trichopodaERN0103473.242660.3175sesamum_indicumSIN_1003193.t74.42461.2903
AMTR_s00002p00146270amborella_trichopodaERN0103476.190558.5034lactuca_sativacds-PLY99480.174.501157.2062
AMTR_s00002p00146270amborella_trichopodaERN0103477.324360.0907helianthus_annuusmRNA:HanXRQr2_Chr17g081894176.457459.417
AMTR_s00002p00146270amborella_trichopodaERN0103471.428656.2358avena_sativa_ot3098cds.AVESA.00001b.r3.7Dg0001400.167.596653.2189
AMTR_s00002p00146270amborella_trichopodaERN0103471.201856.0091avena_sativa_ot3098cds.AVESA.00001b.r3.7Ag0002406.167.38253.0043
AMTR_s00002p00146270amborella_trichopodaERN0103471.201854.6485avena_sativa_ot3098cds.AVESA.00001b.r3.7Cg0002500.267.38251.7167
AMTR_s00002p00146270amborella_trichopodaERN0103458.049945.5782lolium_perennecds.KYUSt_chr7.2293471.708756.3025
AMTR_s00002p00146270amborella_trichopodaERN0103469.841355.7823oryza_longistaminataKN538681.1_FGP11166.379353.0172
AMTR_s00002p00146270amborella_trichopodaERN0103471.201854.6485avena_sativa_sangAVESA.00010b.r2.7CG0667850.1.CDS67.38251.7167
AMTR_s00002p00146270amborella_trichopodaERN0103437.868530.1587solanum_tuberosumPGSC0003DMT40004431180.676364.2512
AMTR_s00002p00146270amborella_trichopodaERN0103470.294856.0091oryza_rufipogonORUFI08G03930.166.954653.3477
AMTR_s00002p00146270amborella_trichopodaERN0103469.841355.3288oryza_brachyanthaOB08G13800.166.956553.0435
AMTR_s00002p00146270amborella_trichopodaERN0103470.521556.2358oryza_glaberrimaORGLA08G0029700.167.170653.5637
AMTR_s00002p00146270amborella_trichopodaERN0103465.306151.4739oryza_punctataOPUNC08G03360.165.903951.9451
AMTR_s00002p00146270amborella_trichopodaERN0103472.562455.7823setaria_italicaKQL0071969.114553.1317
AMTR_s00002p00146270amborella_trichopodaERN0103472.562455.7823setaria_viridisTKW0883469.114553.1317
AMTR_s00002p00146270amborella_trichopodaERN0103472.562455.7823sorghum_bicolorEES1459170.021953.8293
AMTR_s00002p00146270amborella_trichopodaERN0103470.748355.3288sorghum_bicolorOQU9045162.275448.7026
AMTR_s00002p00146270amborella_trichopodaERN0103470.294856.6893triticum_turgidumTRITD6Bv1G016460.165.817453.0786
AMTR_s00002p00146270amborella_trichopodaERN0103469.614556.2358triticum_turgidumTRITD6Av1G010890.165.180552.6539
AMTR_s00002p00146270amborella_trichopodaERN0103470.294856.0091secale_cerealeSECCE4Rv1G0286660.166.381252.8908
AMTR_s00002p00146270amborella_trichopodaERN0103470.06856.4626triticum_aestivumTraesCS6D02G055600.165.605152.8662
AMTR_s00002p00146270amborella_trichopodaERN0103470.294856.6893triticum_aestivumTraesCS6B02G072400.165.817453.0786
AMTR_s00002p00146270amborella_trichopodaERN0103469.614556.2358triticum_aestivumTraesCS6A02G053900.165.180552.6539
AMTR_s00002p00146270amborella_trichopodaERN0103473.015956.0091zea_maysZm00001eb415700_P00469.69753.4632
AMTR_s00002p00146270amborella_trichopodaERN0103469.387854.8753chenopodium_quinoaAUR62013794-RA:cds7559.3137
AMTR_s00002p00146270amborella_trichopodaERN0103464.625850.5669chenopodium_quinoaAUR62023361-RA:cds74.412558.2245
AMTR_s00002p00146270amborella_trichopodaERN0103459.637243.5374chara_brauniiGBG6921929.717521.6949
AMTR_s00002p00146270amborella_trichopodaERN0103474.603259.1837arabis_alpinaKFK4245873.766858.5202
AMTR_s00002p00146270amborella_trichopodaERN0103473.469460.771corylus_avellanaCav01g30990.t172.80960.2247
AMTR_s00002p00146270amborella_trichopodaERN0103470.294854.6485brachypodium_distachyonKQJ9531466.954652.0518
AMTR_s00002p00146270amborella_trichopodaERN0103469.614554.6485oryza_glumipatulaOGLUM08G03640.153.298641.8403
AMTR_s00002p00146270amborella_trichopodaERN0103469.387855.3288oryza_meridionalisOMERI08G03600.167.699153.9823
AMTR_s00002p00146270amborella_trichopodaERN0103474.376458.9569kalanchoe_fedtschenkoiKaladp0055s0048.1.v1.173.214358.0357
AMTR_s00002p00146270amborella_trichopodaERN0103470.294856.4626triticum_urartuTuG1812G0600000549.01.T0165.957452.9787
AMTR_s00002p00146270amborella_trichopodaERN0103472.108857.5964eucalyptus_grandisKCW7479772.602757.9909
AMTR_s00002p00146270amborella_trichopodaERN0103465.532951.7007cynara_cardunculusKVH9722269.138854.5455
AMTR_s00002p00146270amborella_trichopodaERN0103433.106626.7574trifolium_pratenseTp57577_TGAC_v2_mRNA4047472.277258.4158
AMTR_s00002p00146270amborella_trichopodaERN0103451.700741.9501trifolium_pratenseTp57577_TGAC_v2_mRNA213197560.8553
AMTR_s00002p00146270amborella_trichopodaERN0103474.603261.4512gossypium_raimondiiKJB3702574.943161.7312
AMTR_s00002p00146270amborella_trichopodaERN0103474.829958.5034arabidopsis_lyratafgenesh2_kg.2__2293__AT1G80770.173.660757.5893
AMTR_s00002p00146270amborella_trichopodaERN0103470.06856.2358hordeum_vulgareHORVU.MOREX.r3.6HG0547410.165.605152.6539
AMTR_s00002p00146270amborella_trichopodaERN0103470.06855.5556oryza_barthiiOBART08G03530.166.883153.0303
AMTR_s00002p00146270amborella_trichopodaERN0103473.696162.1315musa_acuminataMa01_p08820.174.370762.7002
AMTR_s00002p00146270amborella_trichopodaERN0103474.376458.7302arabidopsis_hallerig01565.t173.051257.6837
AMTR_s00002p00146270amborella_trichopodaERN0103460.317548.0726eragrostis_tefEt_8A_056942.CDS66.169252.7363
AMTR_s00002p00146270amborella_trichopodaERN0103471.428656.2358eragrostis_tefEt_8B_059307.CDS68.181853.6797
AMTR_s00002p00146270amborella_trichopodaERN0103473.696160.5442corymbia_citriodoracds-KAF8013906.173.198260.1351
AMTR_s00002p00146270amborella_trichopodaERN0103477.777860.771rosa_chinensisPRQ5704177.426660.4966
AMTR_s00002p00146270amborella_trichopodaERN0103473.469460.771juglans_regiacds.Jr05_02050_p174.141961.3272
AMTR_s00002p00146270amborella_trichopodaERN0103476.417262.585juglans_regiacds.Jr05_02040_p176.072262.3025
AMTR_s00002p00146270amborella_trichopodaERN0103476.417262.3583juglans_regiacds.Jr05_02030_p174.557560.8407
AMTR_s00002p00146270amborella_trichopodaERN0103469.614554.195saccharum_spontaneumSspon.06G0010860-1A-mRNA-1:cds74.695958.1509
AMTR_s00002p00146270amborella_trichopodaERN0103471.655354.8753saccharum_spontaneumSspon.06G0010860-4D-mRNA-1:cds70.222253.7778
AMTR_s00002p00146270amborella_trichopodaERN0103470.06854.6485saccharum_spontaneumSspon.06G0010860-3C-mRNA-1:cds75.365958.7805
AMTR_s00002p00146270amborella_trichopodaERN0103470.06856.4626triticum_dicoccoidesTRIDC6AG006640.268.211954.9669
AMTR_s00002p00146270amborella_trichopodaERN0103469.841356.4626triticum_dicoccoidesTRIDC6BG009350.269.841356.4626
AMTR_s00002p00146270amborella_trichopodaERN0103474.376458.9569brassica_oleraceaBo6g080670.173.214358.0357
AMTR_s00002p00146270amborella_trichopodaERN0103474.829958.9569brassica_oleraceaBo6g124240.172.210156.8928
AMTR_s00002p00146270amborella_trichopodaERN0103470.748356.6893oryza_indicaBGIOSGA027618-PA65.822852.7426
AMTR_s00002p00146270amborella_trichopodaERN0103473.469458.9569dioscorea_rotundataDRNTG_11787.173.636459.0909
AMTR_s00002p00146270amborella_trichopodaERN0103470.521556.9161leersia_perrieriLPERR08G03530.163.083250.9128
AMTR_s00002p00146270amborella_trichopodaERN0103475.73762.8118olea_europaeaOE9A085052C175.056262.2472
AMTR_s00002p00146270amborella_trichopodaERN0103477.55162.8118actinidia_chinensisPSS1008777.02762.3874
AMTR_s00002p00146270amborella_trichopodaERN0103478.458163.2653prunus_aviumPav_sc0002266.1_g210.1.mk:mrna76.211561.4537
AMTR_s00002p00146270amborella_trichopodaERN0103476.870862.1315quercus_subercds-POE82692.174.342160.0877
AMTR_s00002p00146270amborella_trichopodaERN0103472.335658.7302citrus_clementinaESR5873273.333359.5402
AMTR_s00002p00146270amborella_trichopodaERN0103474.603258.9569brassica_rapa_ro18A07p033270.1_BraROA.168.257353.9419
AMTR_s00002p00146270amborella_trichopodaERN0103475.056759.1837brassica_rapa_ro18A07p051910.1_BraROA.147.763337.6623
AMTR_s00002p00146270amborella_trichopodaERN0103436.734729.2517daucus_carotaKZM819137257.3333
AMTR_s00002p00146270amborella_trichopodaERN0103470.294857.5964nymphaea_colorataNC12G0250100.1:cds76.167162.4079
AMTR_s00002p00146270amborella_trichopodaERN0103445.80532.4263ostreococcus_lucimarinusABO9411469.655249.3103
AMTR_s00002p00146270amborella_trichopodaERN0103470.06856.4626aegilops_tauschiiAET6Gv20138800.161.849.8
AMTR_s00002p00146270amborella_trichopodaERN0103472.335661.2245pistacia_veracds-EVM0029544.175.058863.5294
AMTR_s00002p00146270amborella_trichopodaERN0103470.294854.6485digitaria_exilisDexi6A01G0004830.1:cds70.135754.5249
AMTR_s00002p00146270amborella_trichopodaERN0103470.521554.6485digitaria_exilisDexi6B01G0004470.1:cds70.36254.5249
AMTR_s00002p00146270amborella_trichopodaERN0103470.294856.0091oryza_sativaOs08t0158900-0166.954653.3477
AMTR_s00002p00146270amborella_trichopodaERN0103472.562456.4626panicum_halliiPUZ5020669.114553.7797
AMTR_s00002p00146270amborella_trichopodaERN0103477.777862.3583quercus_lobataQL04p025874:mrna63.873451.2104
AMTR_s00002p00146270amborella_trichopodaERN0103471.428655.7823eragrostis_curvulaTVU4292168.181853.2468
AMTR_s00002p00146270amborella_trichopodaERN0103475.056759.8639camelina_sativaCsa07g059040.132.419225.857
AMTR_s00002p00146270amborella_trichopodaERN0103475.056759.6372camelina_sativaCsa09g094150.135.822528.4632
AMTR_s00002p00146270amborella_trichopodaERN0103475.056759.8639camelina_sativaCsa16g049600.172.428957.7681
AMTR_s00002p00146270amborella_trichopodaERN0103449.659941.2698selaginella_moellendorffiiEFJ2257569.96858.147
AMTR_s00002p00146270amborella_trichopodaERN0103460.77148.2993selaginella_moellendorffiiEFJ2257862.03749.3056
AMTR_s00002p00146270amborella_trichopodaERN0103460.997748.5261selaginella_moellendorffiiEFJ1164162.268549.537
AMTR_s00002p00146270amborella_trichopodaERN0103476.870863.0385vitis_viniferaVitvi08g00177_P00176.179862.4719
AMTR_s00002p00146270amborella_trichopodaERN0103473.469459.6372eutrema_salsugineumESQ2711873.636459.7727
AMTR_s00002p00146270amborella_trichopodaERN0103468.480752.6077echinochloa_crusgalliscaffold18.245.cds66.666751.2141
AMTR_s00002p00146270amborella_trichopodaERN0103471.655356.4626echinochloa_crusgalliscaffold129.204.cds68.250553.7797
AMTR_s00002p00146270amborella_trichopodaERN0103471.882156.4626echinochloa_crusgalliscaffold177.77.cds68.025753.4335
AMTR_s00002p00146270amborella_trichopodaERN0103469.16157.5964corchorus_capsularisOMO8305566.017354.9784
AMTR_s00002p00146270amborella_trichopodaERN0103475.73763.9456fraxinus_excelsiorFRAEX38873_v2_000347810.1.cds75.056263.3708
AMTR_s00002p00146270amborella_trichopodaERN0103475.283460.3175citrullus_lanatusCla97C05G083400.174.774859.9099
AMTR_s00002p00146270amborella_trichopodaERN0103470.521556.2358oryza_nivaraONIVA08G03510.167.170653.5637

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression