RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | AMTR_s00002p00026670 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
hypothetical protein
|
Status |
Confidence |
Length |
3132 bases |
Strand |
Plus strand |
Position |
AmTr_v1.0_scaffold00002 : 160519 - 163650 |
RNA binding domain |
MRP_L53 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ERN00935 |
MRP_L53 |
PF10780 |
3.5e-11 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
ERN00935 |
501 |
166aa |
ERN00935 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
AMTR_s00002p00026670 | amborella_trichopoda | ERN11732 | 94.5652 | 91.3043 | amborella_trichopoda | ERN00935 | 52.4096 | 50.6024 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 63.253 | 54.8193 | papaver_somniferum | RZC44789 | 82.0312 | 71.0938 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 63.253 | 54.8193 | papaver_somniferum | RZC66605 | 82.0312 | 71.0938 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 51.8072 | 37.9518 | marchantia_polymorpha | PTQ28947 | 73.5043 | 53.8462 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 63.253 | 54.8193 | cannabis_sativa_female | cds.evm.model.02.263.1.5bd9b134 | 82.0312 | 71.0938 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 62.6506 | 54.2169 | ficus_carica | FCD_00003478-RA:cds | 81.25 | 70.3125 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 59.0361 | 51.2048 | ficus_carica | FCD_00004781-RA:cds | 65.3333 | 56.6667 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 60.8434 | 51.8072 | beta_vulgaris | KMS99632 | 78.9062 | 67.1875 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 60.241 | 51.8072 | theobroma_cacao | EOY14969 | 59.1716 | 50.8876 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 59.6386 | 51.8072 | cucumis_melo | MELO3C003771.2.1 | 48.0583 | 41.7476 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 61.4458 | 52.4096 | arabidopsis_thaliana | AT5G39600.1 | 80.315 | 68.5039 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 58.4337 | 51.8072 | populus_trichocarpa | Potri.012G106900.4.v4.1 | 74.0458 | 65.6489 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 62.6506 | 55.4217 | populus_trichocarpa | Potri.004G228566.1.v4.1 | 81.25 | 71.875 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 62.6506 | 55.4217 | cucumis_sativus | KGN60014 | 81.8898 | 72.4409 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 62.0482 | 53.012 | brassica_juncea | cds.BjuB01g27560S | 80.4688 | 68.75 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 62.0482 | 53.012 | brassica_napus | CDX74443 | 80.4688 | 68.75 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 62.0482 | 53.012 | brassica_napus | CDY30257 | 80.4688 | 68.75 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 62.6506 | 53.012 | prunus_persica | ONI32452 | 81.25 | 68.75 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 58.4337 | 50 | prunus_persica | ONI29118 | 74.6154 | 63.8462 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 40.3614 | 32.5301 | cajanus_cajan | C.cajan_29238.t.cds1 | 67.6768 | 54.5455 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 40.3614 | 32.5301 | cajanus_cajan | C.cajan_00248.t.cds1 | 67.6768 | 54.5455 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 63.253 | 52.4096 | malus_domestica_golden | mRNA:MD02G0201200 | 82.0312 | 67.9688 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 63.253 | 52.4096 | malus_domestica_golden | mRNA:MD07G0060100 | 82.0312 | 67.9688 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 60.241 | 50 | glycine_max | KRH51725 | 78.125 | 64.8438 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 60.8434 | 50.6024 | glycine_max | KRH61062 | 78.9062 | 65.625 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 62.6506 | 53.6145 | prunus_dulcis | VVA22456 | 81.25 | 69.5312 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 58.4337 | 50 | prunus_dulcis | VVA34838 | 74.6154 | 63.8462 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 58.4337 | 48.7952 | medicago_truncatula | AES59058 | 75.7812 | 63.2812 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 59.6386 | 49.3976 | medicago_truncatula | KEH36236 | 77.3438 | 64.0625 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 63.253 | 54.2169 | lupinus_angustifolius | OIV97598 | 82.0312 | 70.3125 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 54.2169 | 42.1687 | physcomitrium_patens | PAC:32914218.CDS.1 | 63.8298 | 49.6454 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 60.241 | 49.3976 | phaseolus_vulgaris | ESW08067 | 78.125 | 64.0625 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 59.6386 | 50 | pisum_sativum | Psat5g014400.1.cds | 77.3438 | 64.8438 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 60.241 | 50 | vigna_unguiculata | Vigun09g252100.1.v1.2 | 78.125 | 64.8438 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 54.2169 | 42.1687 | manihot_esculenta | OAY40849 | 58.4416 | 45.4545 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 61.4458 | 53.6145 | manihot_esculenta | OAY22658 | 79.6875 | 69.5312 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 59.6386 | 48.7952 | capsicum_annuum | PHT84911 | 77.3438 | 63.2812 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 57.2289 | 48.7952 | vigna_radiata | Vradi05g13760.1 | 68.8406 | 58.6957 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 59.6386 | 51.8072 | sesamum_indicum | SIN_1009082.t | 57.2254 | 49.711 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 57.8313 | 48.7952 | sesamum_indicum | SIN_1002373.t.cds1 | 58.8957 | 49.6933 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 62.6506 | 55.4217 | lactuca_sativa | cds-PLY89715.1 | 81.25 | 71.875 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 62.6506 | 55.4217 | helianthus_annuus | mRNA:HanXRQr2_Chr04g0179221 | 81.25 | 71.875 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 63.8554 | 56.6265 | helianthus_annuus | mRNA:HanXRQr2_Chr15g0694571 | 82.8125 | 73.4375 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 63.253 | 52.4096 | solanum_tuberosum | PGSC0003DMT400009546 | 82.0312 | 67.9688 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 60.241 | 45.7831 | ananas_comosus | Aco004433.1.mrna1 | 77.5194 | 58.9147 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 60.241 | 51.2048 | chenopodium_quinoa | AUR62035723-RA:cds | 68.9655 | 58.6207 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 62.0482 | 53.6145 | ipomoea_triloba | itb01g05120.t1 | 81.1024 | 70.0787 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 57.2289 | 47.5904 | ipomoea_triloba | itb01g34980.t1 | 78.5124 | 65.2893 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 62.0482 | 53.6145 | ipomoea_triloba | itb12g12310.t1 | 81.1024 | 70.0787 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 39.759 | 30.7229 | kalanchoe_fedtschenkoi | Kaladp0095s0739.1.v1.1.CDS.1 | 74.1573 | 57.3034 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 53.6145 | 45.1807 | kalanchoe_fedtschenkoi | Kaladp1213s0002.1.v1.1 | 74.1667 | 62.5 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 60.241 | 52.4096 | kalanchoe_fedtschenkoi | Kaladp0053s0166.1.v1.1 | 76.3359 | 66.4122 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 60.241 | 53.012 | eucalyptus_grandis | KCW67932 | 80.6452 | 70.9677 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 62.6506 | 56.6265 | cynara_cardunculus | KVH87654 | 81.25 | 73.4375 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 60.241 | 51.2048 | trifolium_pratense | Tp57577_TGAC_v2_mRNA6006 | 77.5194 | 65.8915 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 58.4337 | 48.7952 | trifolium_pratense | Tp57577_TGAC_v2_mRNA40212 | 75.7812 | 63.2812 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 59.6386 | 52.4096 | gossypium_raimondii | KJB58762 | 65.1316 | 57.2368 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 43.3735 | 35.5422 | gossypium_raimondii | KJB29634 | 64.8649 | 53.1532 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 61.4458 | 51.2048 | arabidopsis_lyrata | scaffold_704084.1 | 80.315 | 66.9291 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 62.0482 | 47.5904 | musa_acuminata | Ma02_p04630.1 | 80.4688 | 61.7188 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 61.4458 | 51.2048 | arabidopsis_halleri | g24694.t2 | 69.863 | 58.2192 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 59.0361 | 51.2048 | corymbia_citriodora | cds-KAF7846516.1 | 64.0523 | 55.5556 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 59.0361 | 52.4096 | corymbia_citriodora | cds-KAF8022719.1 | 79.0323 | 70.1613 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 63.253 | 54.2169 | rosa_chinensis | PRQ27171 | 82.0312 | 70.3125 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 62.0482 | 53.012 | brassica_oleracea | Bo00578s100.1 | 80.4688 | 68.75 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 63.8554 | 53.012 | dioscorea_rotundata | DRNTG_21837.1 | 82.8125 | 68.75 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 63.253 | 53.6145 | olea_europaea | OE9A093051C3 | 82.0312 | 69.5312 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 62.6506 | 53.6145 | olea_europaea | OE9A023261C1 | 81.25 | 69.5312 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 61.4458 | 52.4096 | actinidia_chinensis | PSR99608 | 79.6875 | 67.9688 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 59.6386 | 51.2048 | prunus_avium | Pav_sc0002080.1_g230.1.mk:CDS:1 | 77.9528 | 66.9291 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 59.0361 | 48.7952 | prunus_avium | Pav_sc0001674.1_g040.1.mk:mrna | 64.9007 | 53.6424 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 59.0361 | 50.6024 | quercus_suber | cds-POE84075.1 | 77.7778 | 66.6667 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 48.1928 | 39.1566 | quercus_suber | cds-POF10079.1 | 60.6061 | 49.2424 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 59.0361 | 52.4096 | quercus_suber | cds-POF20645.1 | 72.0588 | 63.9706 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 45.7831 | 36.747 | quercus_suber | cds-POE84076.1 | 70.3704 | 56.4815 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 63.8554 | 52.4096 | nicotiana_attenuata | OIT00052 | 82.8125 | 67.9688 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 59.0361 | 49.3976 | citrus_clementina | ESR48382 | 76.5625 | 64.0625 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 62.0482 | 53.012 | brassica_rapa_ro18 | A04p016800.1_BraROA.1 | 80.4688 | 68.75 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 59.0361 | 52.4096 | daucus_carota | KZM98784 | 61.25 | 54.375 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 32.5301 | 20.4819 | ostreococcus_lucimarinus | ABO94171 | 47.7876 | 30.0885 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 62.6506 | 54.8193 | coffea_canephora | CDP07423 | 81.25 | 71.0938 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 62.6506 | 55.4217 | pistacia_vera | cds-EVM0008506.1 | 81.25 | 71.875 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 62.6506 | 54.8193 | quercus_lobata | QL03p018250:mrna | 81.25 | 71.0938 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 62.6506 | 55.4217 | quercus_lobata | QL02p011006:mrna | 81.25 | 71.875 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 60.8434 | 51.8072 | camelina_sativa | Csa12g081830.1 | 79.5276 | 67.7165 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 65.6627 | 53.6145 | camelina_sativa | Csa10g046950.1 | 67.284 | 54.9383 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 60.8434 | 52.4096 | camelina_sativa | Csa11g055640.1 | 79.5276 | 68.5039 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 63.253 | 56.0241 | vitis_vinifera | Vitvi18g01082_P001 | 82.0312 | 72.6562 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 61.4458 | 52.4096 | eutrema_salsugineum | ESQ47068 | 80.315 | 68.5039 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 50 | 42.7711 | corchorus_capsularis | OMO87457 | 78.3019 | 66.9811 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 59.6386 | 51.8072 | corchorus_capsularis | OMO99820 | 22.449 | 19.5011 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 63.253 | 53.012 | fraxinus_excelsior | FRAEX38873_v2_000082980.1.cds | 82.0312 | 68.75 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 46.3855 | 36.1446 | fraxinus_excelsior | FRAEX38873_v2_000213580.1.cds | 64.7059 | 50.4202 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 63.253 | 53.012 | fraxinus_excelsior | FRAEX38873_v2_000119130.1.cds | 82.0312 | 68.75 |
AMTR_s00002p00026670 | amborella_trichopoda | ERN00935 | 59.6386 | 51.8072 | citrullus_lanatus | Cla97C05G099860.1 | 62.6582 | 54.4304 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |