Description

Ensembl ID AET5Gv21232500 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 4227 bases Strand Plus strand
Position 5D : 573493326 - 573497552 RNA binding domain Lactamase_B , Beta-Casp , CPSF73-100_C , RMMBL
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
AET5Gv21232500 Lactamase_B PF00753 2.6e-19 1
AET5Gv21232500 Lactamase_B PF00753 2.9e-16 2
AET5Gv21232500 Beta-Casp PF10996 1.5e-27 3
AET5Gv21232500 Beta-Casp PF10996 1.6e-27 4
AET5Gv21232500 CPSF73-100_C PF11718 5.4e-46 5
AET5Gv21232500 CPSF73-100_C PF11718 5.8e-46 6
AET5Gv21232500 RMMBL PF07521 3.3e-13 7
AET5Gv21232500 RMMBL PF07521 3.4e-13 8

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- AET5Gv21232500.1 2581 670aa AET5Gv21232500
- AET5Gv21232500.2 2227 649aa AET5Gv21232500

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
AET5Gv21232500aegilops_tauschiiAET5Gv20498700.250.724632.2464aegilops_tauschiiAET5Gv21232500.141.79126.5672
AET5Gv21232500aegilops_tauschiiAET3Gv20926200.2328.86613.5493aegilops_tauschiiAET5Gv21232500.129.253713.7313
AET5Gv21232500aegilops_tauschiiAET5Gv21052200.233.739818.2927aegilops_tauschiiAET5Gv21232500.137.164220.1493
AET5Gv21232500aegilops_tauschiiAET6Gv20536500.424.065411.6822aegilops_tauschiiAET5Gv21232500.130.746314.9254
AET5Gv21232500aegilops_tauschiiAET5Gv20833700.489.450986.9942aegilops_tauschiiAET5Gv21232500.192.388189.8507
AET5Gv21232500aegilops_tauschiiAET5Gv21185100.184.137977.2414aegilops_tauschiiAET5Gv21232500.118.20916.7164

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.166.865747.9104chondrus_crispusCDF3326965.306146.793
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.163.432846.5672chlamydomonas_reinhardtiiPNW7506658.29942.7984
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.182.388169.8507physcomitrium_patensPp3c6_3520V3.180.938468.6217
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.182.238869.7015physcomitrium_patensPp3c5_23920V3.180.791868.4751
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.183.134370marchantia_polymorphaPTQ3568281.671668.7683
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.116.567215.5224pisum_sativumPsat3g190360.1.cds88.095282.5397
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.197.910496.2687avena_sativa_sangAVESA.00010b.r2.6CG1116800.1.CDS94.660993.0736
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.197.611995.6716avena_sativa_sangAVESA.00010b.r2.7CG0715600.1.CDS94.372392.4964
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.198.358296.4179avena_sativa_sangAVESA.00010b.r2.4AG0620910.1.CDS95.231293.3526
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.198.20996.2687avena_sativa_sangAVESA.00010b.r2.4DG0764220.1.CDS95.086793.2081
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.197.761296.2687avena_sativa_sangAVESA.00010b.r2.2DG0387890.1.CDS94.516693.0736
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.198.059796.4179avena_sativa_sangAVESA.00010b.r2.1AG0029860.1.CDS94.805293.2179
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.198.358296.4179avena_sativa_ot3098cds.AVESA.00001b.r3.4Ag0002190.193.874692.0228
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.197.910496.4179avena_sativa_ot3098cds.AVESA.00001b.r3.2Dg0000784.191.876790.4762
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.198.358296.4179avena_sativa_ot3098cds.AVESA.00001b.r3.4Dg0002549.193.874692.0228
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.194.626992.0896avena_sativa_ot3098cds.AVESA.00001b.r3.7Cg0000062.488.055685.6944
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.198.059796.4179avena_sativa_ot3098cds.AVESA.00001b.r3.6Cg0001600.192.796691.2429
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.197.910496.2687avena_sativa_ot3098cds.AVESA.00001b.r3.1Ag0002359.192.264490.7173
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.197.014991.791oryza_rufipogonORUFI03G43090.192.857187.8571
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.191.19486.8657oryza_longistaminataKN538745.1_FGP02896.677292.0886
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.197.910496.1194lolium_perennecds.KYUSt_chr6.2895567.489766.2551
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.194.626989.7015setaria_italicaKQK8612791.22386.4748
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.189.850783.2836oryza_punctataOPUNC07G25610.180.373874.4993
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.196.865792.0896oryza_punctataOPUNC03G38380.192.979988.3954
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.199.701599.1045secale_cerealeSECCE7Rv1G0453930.196.531895.9538
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.194.626989.7015setaria_viridisTKV9011782.659778.3572
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.196.716491.9403oryza_glaberrimaORGLA03G0381700.193.103488.5057
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.194.776191.194sorghum_bicolorEER9049891.366987.9137
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.1100100triticum_aestivumTraesCS5D02G555600.196.820896.8208
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.199.850799.5522triticum_aestivumTraesCS5B02G537400.196.676396.3873
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.199.40399.2537triticum_aestivumTraesCS4A02G324800.196.242896.0983
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.194.029989.403zea_maysZm00001eb210600_P00190.778186.3112
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.195.820991.791zea_maysZm00001eb064770_P00192.10988.2353
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.187.761281.194asparagus_officinalisONK5573190.184183.4356
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.194.179187.3134ananas_comosusAco027573.1.mrna190.660984.0517
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.165.970148.6567drosophila_melanogasterFBpp008310564.619947.6608
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.181.19480.7463triticum_turgidumTRITD5Bv1G249510.199.633799.0843
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.180.746380.4478triticum_turgidumTRITD4Av1G210630.299.084398.7179
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.166.119447.3134caenorhabditis_elegansY67H2A.1.162.659144.8373
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.171.940353.5821homo_sapiensENSP0000023811270.467852.4854
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.197.761295.2239brachypodium_distachyonKQK1203185.286583.0729
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.196.268793.7313brachypodium_distachyonPNT7377494.436391.9473
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.187.313476.8657amborella_trichopodaERM9464082.861272.9462
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.187.462777.3134amborella_trichopodaERM9480883.120673.4752
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.196.865791.791oryza_meridionalisOMERI03G38050.192.714387.8571
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.196.268789.2537eragrostis_curvulaTVU4420893.073686.2915
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.195.373189.403eragrostis_curvulaTVU1281785.427880.0802
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.195.223989.1045eragrostis_curvulaTVU1283581.899976.6367
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.190.746379.7015eragrostis_curvulaTVU3053486.733276.1769
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.190.746380.2985eragrostis_curvulaTVU3057086.733276.7475
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.197.014991.9403oryza_indicaBGIOSGA009419-PA92.857188
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.196.865791.791oryza_sativaOs03t0852900-0192.714387.8571
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.197.014992.0896oryza_glumipatulaOGLUM03G41110.193.123288.3954
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.196.716491.9403oryza_barthiiOBART03G41290.193.103488.5057
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.189.40383.5821leersia_perrieriLPERR11G17300.178.505973.3945
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.196.417991.6418leersia_perrieriLPERR03G35260.193.083688.4726
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.198.656798.209triticum_dicoccoidesTRIDC5BG081920.299.848999.3958
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.198.059797.9104triticum_dicoccoidesTRIDC4AG049130.199.394999.2436
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.198.955297.9104hordeum_vulgareHORVU.MOREX.r3.5HG0535750.195.809294.7977
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.166.268745.5224cyanidioschyzon_merolaeCMH020CT59.27940.721
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.180.447866.7164chara_brauniiGBG8088578.457165.0655
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.194.626989.5522digitaria_exilisDexi9B01G0000690.1:cds91.09286.2069
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.194.477689.403digitaria_exilisDexi9A01G0000780.1:cds90.948386.0632
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.196.417989.8507eragrostis_tefEt_4A_034405.CDS93.217986.8687
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.186.417974.6269eragrostis_tefEt_1A_006060.CDS86.289174.5156
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.196.268789.7015eragrostis_tefEt_4B_038531.CDS93.073686.7244
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.172.238867.7612saccharum_spontaneumSspon.01G0033240-1A-mRNA-1:cds91.148885.4991
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.157.611954.4776saccharum_spontaneumSspon.01G0033240-2D-mRNA-1.cds193.917388.8078
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.195.671691.6418saccharum_spontaneumSspon.01G0033240-1P-mRNA-1:cds91.965688.0918
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.182.686670selaginella_moellendorffiiEFJ1386681.831669.2762
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.182.686670selaginella_moellendorffiiEFJ0449881.831669.2762
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.182.686670selaginella_moellendorffiiEFJ1271280.994168.5673
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.162.835843.1343saccharomyces_cerevisiaeYLR277C54.043637.0988
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.169.701550galdieria_sulphurariaEME2701565.132546.7225
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.166.417945.8209ostreococcus_lucimarinusABO9806858.018340.0261
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.188.955279.403nymphaea_colorataNC12G0245570.1:cds86.251876.9899
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.195.223990.597echinochloa_crusgalliscaffold397.28.cds91.798687.3381
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.195.074690.2985echinochloa_crusgalliscaffold65.54.cds91.654787.0504
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.165.074661.194echinochloa_crusgalliscaffold144.197.cds93.965588.3621
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.195.074690.2985echinochloa_crusgalliscaffold253.143.cds91.52386.9253
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.192.686684.3284musa_acuminataMa06_p02120.188.841280.8298
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.195.223990.2985panicum_halliiPUZ3602891.798687.0504
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.179.253773.4328panicum_halliiPUZ3960690.306183.6735
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.197.014991.9403oryza_nivaraONIVA03G43390.192.857188
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.197.313492.8358oryza_brachyanthaOB03G48310.193.81389.4964
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.190.895581.791dioscorea_rotundataDRNTG_18224.187.578.7356
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.1100100triticum_aestivum_maceTraesMAC5D03G03232180.196.820896.8208
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.199.701599.403triticum_aestivum_maceTraesMAC5B03G03017680.196.531896.2428
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.199.40399.2537triticum_aestivum_maceTraesMAC4A03G02154250.196.242896.0983
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.1100100triticum_aestivum_arinalrforTraesARI5D03G03187690.196.820896.8208
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.199.850799.5522triticum_aestivum_arinalrforTraesARI7B03G04340250.196.676396.3873
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.199.40399.2537triticum_aestivum_arinalrforTraesARI4A03G02193570.196.242896.0983
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.1100100triticum_aestivum_landmarkTraesLDM5D03G03236780.196.820896.8208
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.199.850799.5522triticum_aestivum_landmarkTraesLDM5B03G03023040.196.676396.3873
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.199.40399.2537triticum_aestivum_landmarkTraesLDM4A03G02154430.196.242896.0983
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.1100100triticum_aestivum_juliusTraesJUL5D03G03258400.196.820896.8208
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.199.850799.5522triticum_aestivum_juliusTraesJUL5B03G03042700.196.676396.3873
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.199.40399.2537triticum_aestivum_juliusTraesJUL4A03G02175410.196.242896.0983
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.1100100triticum_aestivum_norin61TraesNOR5D03G03261950.196.820896.8208
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.199.850799.5522triticum_aestivum_norin61TraesNOR5B03G03047950.196.676396.3873
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.199.40399.2537triticum_aestivum_norin61TraesNOR4A03G02177700.196.242896.0983
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.1100100triticum_aestivum_jaggerTraesJAG5D03G03230020.196.820896.8208
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.199.850799.5522triticum_aestivum_jaggerTraesJAG5B03G03016960.196.676396.3873
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.199.40399.2537triticum_aestivum_jaggerTraesJAG4A03G02156970.196.242896.0983
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.1100100triticum_aestivum_lancerTraesLAC5D03G03188480.196.820896.8208
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.199.701599.403triticum_aestivum_lancerTraesLAC5B03G02974810.196.531896.2428
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.199.40399.2537triticum_aestivum_lancerTraesLAC4A03G02108850.196.242896.0983
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.1100100triticum_aestivum_stanleyTraesSTA5D03G03223790.196.820896.8208
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.199.850799.5522triticum_aestivum_stanleyTraesSTA5B03G03011650.196.676396.3873
AET5Gv21232500aegilops_tauschiiAET5Gv21232500.199.40399.2537triticum_aestivum_stanleyTraesSTA4A03G02148630.196.242896.0983

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression