Description

Ensembl ID AET5Gv20833700 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 3263 bases Strand Minus strand
Position 5D : 452110860 - 452114122 RNA binding domain Lactamase_B , Beta-Casp , CPSF73-100_C , RMMBL
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
AET5Gv20833700 Lactamase_B PF00753 3.3e-19 1
AET5Gv20833700 Lactamase_B PF00753 1.2e-15 2
AET5Gv20833700 Lactamase_B PF00753 4.7e-12 3
AET5Gv20833700 Beta-Casp PF10996 1.9e-25 4
AET5Gv20833700 Beta-Casp PF10996 2.9e-25 5
AET5Gv20833700 Beta-Casp PF10996 3e-25 6
AET5Gv20833700 Beta-Casp PF10996 3.2e-25 7
AET5Gv20833700 Beta-Casp PF10996 1.1e-22 8
AET5Gv20833700 CPSF73-100_C PF11718 6.4e-48 9
AET5Gv20833700 CPSF73-100_C PF11718 9.9e-48 10
AET5Gv20833700 CPSF73-100_C PF11718 1e-47 11
AET5Gv20833700 RMMBL PF07521 4.6e-11 12
AET5Gv20833700 RMMBL PF07521 6.1e-11 13
AET5Gv20833700 RMMBL PF07521 6.4e-11 14
AET5Gv20833700 RMMBL PF07521 0.00064 15

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- AET5Gv20833700.3 2196 673aa AET5Gv20833700
- AET5Gv20833700.1 1897 543aa AET5Gv20833700
- AET5Gv20833700.4 2174 692aa AET5Gv20833700
- AET5Gv20833700.2 1907 263aa AET5Gv20833700
- AET5Gv20833700.5 1300 433aa AET5Gv20833700

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
AET5Gv20833700aegilops_tauschiiAET5Gv20498700.246.920329.1667aegilops_tauschiiAET5Gv20833700.437.427723.2659
AET5Gv20833700aegilops_tauschiiAET3Gv20926200.2327.540512.813aegilops_tauschiiAET5Gv20833700.427.023112.5723
AET5Gv20833700aegilops_tauschiiAET5Gv21052200.231.978316.8022aegilops_tauschiiAET5Gv20833700.434.10417.9191
AET5Gv20833700aegilops_tauschiiAET6Gv20536500.422.313111.215aegilops_tauschiiAET5Gv20833700.427.601213.8728
AET5Gv20833700aegilops_tauschiiAET5Gv21232500.192.388189.8507aegilops_tauschiiAET5Gv20833700.489.450986.9942
AET5Gv20833700aegilops_tauschiiAET5Gv21185100.18072.4138aegilops_tauschiiAET5Gv20833700.416.76315.1734

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.461.416243.2081chondrus_crispusCDF3326961.953443.586
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.458.52642.7746chlamydomonas_reinhardtiiPNW7506655.555640.6036
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.475.433564.0173physcomitrium_patensPp3c6_3520V3.176.539664.956
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.475.433563.8728physcomitrium_patensPp3c5_23920V3.176.539664.8094
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.476.156163.8728marchantia_polymorphaPTQ3568277.272764.8094
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.416.040515.0289pisum_sativumPsat3g190360.1.cds88.095282.5397
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.489.450984.9711oryza_rufipogonORUFI03G43090.188.428684
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.487.138783.0925oryza_longistaminataKN538745.1_FGP02895.411490.981
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.487.283281.7919setaria_italicaKQK8612786.906581.4389
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.484.682178.3237oryza_punctataOPUNC07G25610.178.237672.3632
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.489.161885.1156oryza_punctataOPUNC03G38380.188.395484.384
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.491.618590.4624secale_cerealeSECCE5Rv1G0350120.191.486390.3319
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.487.283281.7919setaria_viridisTKV9011778.748473.794
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.488.872884.8266oryza_glaberrimaORGLA03G0381700.188.362184.3391
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.486.849782.948sorghum_bicolorEER9049886.474882.5899
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.493.063692.6301triticum_aestivumTraesCS5D02G367600.192.929392.4964
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.492.196591.0405triticum_aestivumTraesCS5B02G360900.192.063590.9091
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.484.682182.2254triticum_aestivumTraesCS5A02G358600.187.593485.0523
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.491.329590.0289triticum_urartuTuG1812G0500003890.01.T0191.197789.899
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.432.65932.5145triticum_urartuTuG1812G0100002631.01.T0194.560794.1423
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.486.416281.5029zea_maysZm00001eb210600_P00186.167181.268
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.488.005883.6705zea_maysZm00001eb064770_P00187.374583.0703
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.482.65976.1561asparagus_officinalisONK5573187.730180.8282
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.486.560779.4798ananas_comosusAco027573.1.mrna186.063279.023
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.461.271744.3642drosophila_melanogasterFBpp008310561.988344.883
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.492.196591.0405triticum_turgidumTRITD5Bv1G186620.192.063590.9091
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.424.132922.6879triticum_turgidumTRITD4Av1G214920.167.886263.8211
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.461.416243.0636caenorhabditis_elegansY67H2A.1.160.113242.1499
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.465.751448.4104homo_sapiensENSP0000023811266.520548.9766
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.489.884487.2832brachypodium_distachyonKQK1203180.989678.6458
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.488.150384.9711brachypodium_distachyonPNT7377489.311986.0908
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.479.768870.2312amborella_trichopodaERM9464078.18768.8385
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.479.913370.5202amborella_trichopodaERM9480878.439769.2199
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.489.306484.9711oryza_meridionalisOMERI03G38050.188.285784
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.488.439381.7919eragrostis_curvulaTVU4420888.311781.6739
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.487.716881.3584eragrostis_curvulaTVU1281781.149775.2674
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.489.017382.3699eragrostis_curvulaTVU1283579.075773.1707
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.483.959573.8439eragrostis_curvulaTVU3053482.881672.8959
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.484.10474.422eragrostis_curvulaTVU3057083.024373.4665
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.489.450985.1156oryza_indicaBGIOSGA009419-PA88.428684.1429
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.489.306484.9711oryza_sativaOs03t0852900-0188.285784
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.489.306485.1156oryza_glumipatulaOGLUM03G41110.188.538784.384
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.488.872884.8266oryza_barthiiOBART03G41290.188.362184.3391
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.484.971179.7688leersia_perrieriLPERR11G17300.177.064272.346
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.489.161884.2486leersia_perrieriLPERR03G35260.188.904984.0058
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.492.196590.896triticum_dicoccoidesTRIDC5BG056670.392.3391.0275
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.482.65981.6474triticum_dicoccoidesTRIDC5AG052450.1097.610996.4164
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.491.040589.5954hordeum_vulgareHORVU.MOREX.r3.5HG0504930.190.909189.4661
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.460.982740.3179cyanidioschyzon_merolaeCMH020CT56.341837.2497
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.474.42261.2717chara_brauniiGBG8088574.963661.7176
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.486.994281.7919digitaria_exilisDexi9B01G0000690.1:cds86.494381.3218
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.486.849781.5029digitaria_exilisDexi9A01G0000780.1:cds86.350681.0345
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.488.294881.9364eragrostis_tefEt_4A_034405.CDS88.167481.8182
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.479.479869.6532eragrostis_tefEt_1A_006060.CDS81.967271.8331
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.488.150381.6474eragrostis_tefEt_4B_038531.CDS88.023181.5296
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.468.786164.7399saccharum_spontaneumSspon.01G0033240-1A-mRNA-1:cds89.642284.3691
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.454.624351.5896saccharum_spontaneumSspon.01G0033240-2D-mRNA-1.cds191.970886.8613
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.487.716883.3815saccharum_spontaneumSspon.01G0033240-1P-mRNA-1:cds87.087582.7834
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.475.722563.7283selaginella_moellendorffiiEFJ1386677.400365.1403
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.475.722563.7283selaginella_moellendorffiiEFJ0449877.400365.1403
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.476.011663.8728selaginella_moellendorffiiEFJ1271276.900664.6199
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.457.94840.0289saccharomyces_cerevisiaeYLR277C51.476335.5584
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.463.583845.3757galdieria_sulphurariaEME2701561.366843.7936
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.461.560742.6301ostreococcus_lucimarinusABO9806855.541138.4615
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.482.080973.5549nymphaea_colorataNC12G0245570.1:cds82.199773.6614
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.487.861382.3699echinochloa_crusgalliscaffold397.28.cds87.48282.0144
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.487.716882.0809echinochloa_crusgalliscaffold65.54.cds87.338181.7266
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.462.138757.5145echinochloa_crusgalliscaffold144.197.cds92.672485.7759
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.487.572382.0809echinochloa_crusgalliscaffold253.143.cds87.06981.6092
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.485.260176.5896musa_acuminataMa06_p02120.184.406375.8226
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.488.005882.8035panicum_halliiPUZ3602887.625982.446
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.475.433569.7977panicum_halliiPUZ3960688.775582.1429
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.489.450985.1156oryza_nivaraONIVA03G43390.188.428684.1429
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.489.161885.2601oryza_brachyanthaOB03G48310.188.77784.8921
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.483.670574.422dioscorea_rotundataDRNTG_18224.183.189773.9943
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.493.208192.7746triticum_aestivum_maceTraesMAC5D03G03171470.193.073692.6407
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.492.34191.185triticum_aestivum_maceTraesMAC5B03G02948460.192.207891.0534
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.468.930667.052triticum_aestivum_maceTraesMAC5A03G02717360.186.101183.7545
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.493.208192.7746triticum_aestivum_arinalrforTraesARI5D03G03126370.193.073692.6407
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.492.34191.185triticum_aestivum_arinalrforTraesARI7B03G04270900.192.207891.0534
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.477.023175.8671triticum_aestivum_arinalrforTraesARI5A03G02760930.1.CDS197.440695.9781
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.493.208192.7746triticum_aestivum_landmarkTraesLDM5D03G03177470.193.073692.6407
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.492.34191.185triticum_aestivum_landmarkTraesLDM5B03G02953420.291.942490.7914
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.484.826682.3699triticum_aestivum_landmarkTraesLDM5A03G02721340.187.742985.2018
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.493.208192.7746triticum_aestivum_juliusTraesJUL5D03G03197690.193.073692.6407
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.492.34191.185triticum_aestivum_juliusTraesJUL5B03G02971920.192.207891.0534
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.461.560758.9595triticum_aestivum_juliusTraesJUL5A03G02738120.181.923178.4615
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.493.208192.7746triticum_aestivum_norin61TraesNOR5D03G03202270.193.073692.6407
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.492.34191.185triticum_aestivum_norin61TraesNOR5B03G02978490.192.207891.0534
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.484.826682.3699triticum_aestivum_norin61TraesNOR5A03G02742300.187.742985.2018
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.493.208192.7746triticum_aestivum_jaggerTraesJAG5D03G03169880.193.073692.6407
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.492.34191.185triticum_aestivum_jaggerTraesJAG5B03G02947380.192.207891.0534
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.491.18589.7399triticum_aestivum_jaggerTraesJAG5A03G02720370.191.18589.7399
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.412.861310.9827triticum_aestivum_lancerTraesLAC2B03G00954390.161.805652.7778
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.493.208192.7746triticum_aestivum_lancerTraesLAC5D03G03128360.193.073692.6407
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.468.930667.052triticum_aestivum_lancerTraesLAC5A03G02673070.186.101183.7545
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.493.208192.7746triticum_aestivum_stanleyTraesSTA5D03G03163650.193.073692.6407
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.492.34191.185triticum_aestivum_stanleyTraesSTA5B03G02941790.192.207891.0534
AET5Gv20833700aegilops_tauschiiAET5Gv20833700.484.826682.3699triticum_aestivum_stanleyTraesSTA5A03G02709890.187.742985.2018

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression