| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | AET5Gv20488200 | Gene ID |
|
Accession |
- |
| Symbol |
|
Alias |
- |
Full Name |
NA |
| Status |
Confidence |
Length |
11107 bases |
Strand |
Minus strand |
| Position |
5D : 317986272 - 317997378 |
RNA binding domain |
RRM_1 , PWI |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| AET5Gv20488200 |
RRM_1 |
PF00076 |
4.8e-08 |
1 |
| AET5Gv20488200 |
RRM_1 |
PF00076 |
1.1e-07 |
2 |
| AET5Gv20488200 |
RRM_1 |
PF00076 |
1.5e-07 |
3 |
| AET5Gv20488200 |
RRM_1 |
PF00076 |
1.5e-07 |
4 |
| AET5Gv20488200 |
RRM_1 |
PF00076 |
2.6e-07 |
5 |
| AET5Gv20488200 |
RRM_1 |
PF00076 |
2.6e-07 |
6 |
| AET5Gv20488200 |
RRM_1 |
PF00076 |
3.4e-07 |
7 |
| AET5Gv20488200 |
RRM_1 |
PF00076 |
3.4e-07 |
8 |
| AET5Gv20488200 |
RRM_1 |
PF00076 |
3.4e-07 |
9 |
| AET5Gv20488200 |
RRM_1 |
PF00076 |
3.4e-07 |
10 |
| AET5Gv20488200 |
RRM_1 |
PF00076 |
3.4e-07 |
11 |
| AET5Gv20488200 |
RRM_1 |
PF00076 |
3.4e-07 |
12 |
| AET5Gv20488200 |
RRM_1 |
PF00076 |
0.00013 |
13 |
| AET5Gv20488200 |
RRM_1 |
PF00076 |
0.00013 |
14 |
| AET5Gv20488200 |
RRM_1 |
PF00076 |
0.00013 |
15 |
| AET5Gv20488200 |
PWI |
PF01480 |
3.6e-07 |
16 |
| AET5Gv20488200 |
PWI |
PF01480 |
3.6e-07 |
17 |
| AET5Gv20488200 |
PWI |
PF01480 |
3.6e-07 |
18 |
| AET5Gv20488200 |
PWI |
PF01480 |
3.6e-07 |
19 |
| AET5Gv20488200 |
PWI |
PF01480 |
3.7e-07 |
20 |
| AET5Gv20488200 |
PWI |
PF01480 |
3.7e-07 |
21 |
| AET5Gv20488200 |
PWI |
PF01480 |
3.9e-07 |
22 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| - |
AET5Gv20488200.23 |
1003 |
188aa |
AET5Gv20488200 |
| - |
AET5Gv20488200.12 |
2404 |
191aa |
AET5Gv20488200 |
| - |
AET5Gv20488200.19 |
1791 |
271aa |
AET5Gv20488200 |
| - |
AET5Gv20488200.7 |
2540 |
341aa |
AET5Gv20488200 |
| - |
AET5Gv20488200.21 |
739 |
245aa |
AET5Gv20488200 |
| - |
AET5Gv20488200.20 |
1915 |
388aa |
AET5Gv20488200 |
| - |
AET5Gv20488200.9 |
3123 |
250aa |
AET5Gv20488200 |
| - |
AET5Gv20488200.10 |
2616 |
331aa |
AET5Gv20488200 |
| - |
AET5Gv20488200.26 |
1479 |
200aa |
AET5Gv20488200 |
| - |
AET5Gv20488200.17 |
2136 |
384aa |
AET5Gv20488200 |
| - |
AET5Gv20488200.13 |
2747 |
250aa |
AET5Gv20488200 |
| - |
AET5Gv20488200.25 |
1716 |
390aa |
AET5Gv20488200 |
| - |
AET5Gv20488200.24 |
1000 |
188aa |
AET5Gv20488200 |
| - |
AET5Gv20488200.5 |
2265 |
342aa |
AET5Gv20488200 |
| - |
AET5Gv20488200.6 |
3038 |
342aa |
AET5Gv20488200 |
| - |
AET5Gv20488200.11 |
1351 |
339aa |
AET5Gv20488200 |
| - |
AET5Gv20488200.18 |
1602 |
188aa |
AET5Gv20488200 |
| - |
AET5Gv20488200.4 |
2468 |
390aa |
AET5Gv20488200 |
| - |
AET5Gv20488200.16 |
1597 |
258aa |
AET5Gv20488200 |
| - |
AET5Gv20488200.1 |
3367 |
341aa |
AET5Gv20488200 |
| - |
AET5Gv20488200.3 |
2468 |
388aa |
AET5Gv20488200 |
| - |
AET5Gv20488200.27 |
560 |
156aa |
AET5Gv20488200 |
| - |
AET5Gv20488200.15 |
2275 |
385aa |
AET5Gv20488200 |
| - |
AET5Gv20488200.8 |
1801 |
167aa |
AET5Gv20488200 |
| - |
AET5Gv20488200.22 |
1983 |
331aa |
AET5Gv20488200 |
| - |
AET5Gv20488200.2 |
3347 |
342aa |
AET5Gv20488200 |
| - |
AET5Gv20488200.14 |
1981 |
356aa |
AET5Gv20488200 |
| - |
AET5Gv20488200.28 |
679 |
132aa |
AET5Gv20488200 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| AET5Gv20488200 | | | | | | | | |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| AET5Gv20488200 | aegilops_tauschii | AET5Gv20488200.4 | 35.1282 | 26.9231 | papaver_somniferum | RZC48364 | 33.0918 | 25.3623 |
| AET5Gv20488200 | aegilops_tauschii | AET5Gv20488200.4 | 35.3846 | 23.8462 | brassica_napus | CDY24522 | 19.8847 | 13.4006 |
| AET5Gv20488200 | aegilops_tauschii | AET5Gv20488200.4 | 25.641 | 16.1538 | lupinus_angustifolius | OIW10560 | 16.835 | 10.6061 |
| AET5Gv20488200 | aegilops_tauschii | AET5Gv20488200.4 | 22.8205 | 13.3333 | lactuca_sativa | cds-PLY63812.1 | 34.7656 | 20.3125 |
| AET5Gv20488200 | aegilops_tauschii | AET5Gv20488200.4 | 10.2564 | 3.07692 | lactuca_sativa | cds-PLY71589.1 | 32.2581 | 9.67742 |
| AET5Gv20488200 | aegilops_tauschii | AET5Gv20488200.4 | 20.5128 | 12.0513 | lactuca_sativa | cds-PLY69515.1 | 53.6913 | 31.5436 |
| AET5Gv20488200 | aegilops_tauschii | AET5Gv20488200.4 | 53.5897 | 42.0513 | triticum_aestivum | TraesCS5D02G205200.1 | 45.733 | 35.8862 |
| AET5Gv20488200 | aegilops_tauschii | AET5Gv20488200.4 | 37.4359 | 29.4872 | brachypodium_distachyon | PNT64502 | 41.1268 | 32.3944 |
| AET5Gv20488200 | aegilops_tauschii | AET5Gv20488200.4 | 18.2051 | 11.7949 | fraxinus_excelsior | FRAEX38873_v2_000259970.1.cds | 51.8248 | 33.5766 |
| AET5Gv20488200 | aegilops_tauschii | AET5Gv20488200.4 | 63.0769 | 56.9231 | triticum_dicoccoides | TRIDC5BG033950.12 | 49.697 | 44.8485 |
| AET5Gv20488200 | aegilops_tauschii | AET5Gv20488200.4 | 34.6154 | 25.3846 | olea_europaea | OE9A079556C1 | 34.264 | 25.1269 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
