RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	AET3Gv20790600	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	9971 bases	Strand	Plus strand
Position	3D : 464675047 - 464685017	RNA binding domain	PP2
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
AET3Gv20790600	PP2	PF14299	3.6e-08	1
AET3Gv20790600	PP2	PF14299	8.3e-08	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	AET3Gv20790600.1	883	131aa	AET3Gv20790600
-	AET3Gv20790600.2	719	86aa	AET3Gv20790600

Gene Model

Click here to download AET3Gv20790600's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download AET3Gv20790600's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
AET3Gv20790600

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
AET3Gv20790600	aegilops_tauschii	AET3Gv20790600.1	28.2443	23.6641	triticum_dicoccoides	TRIDC7AG006840.1	28.6822	24.031
AET3Gv20790600	aegilops_tauschii	AET3Gv20790600.1	39.6947	32.0611	hordeum_vulgare	HORVU.MOREX.r3.2HG0138000.1	37.9562	30.6569

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression