| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | AET3Gv20294400 | Gene ID |
|
Accession |
- |
| Symbol |
|
Alias |
- |
Full Name |
NA |
| Status |
Confidence |
Length |
15813 bases |
Strand |
Plus strand |
| Position |
3D : 96570588 - 96586400 |
RNA binding domain |
tRNA-synt_1d , Arg_tRNA_synt_N , DALR_1 |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| AET3Gv20294400 |
tRNA-synt_1d |
PF00750 |
8.2e-107 |
1 |
| AET3Gv20294400 |
tRNA-synt_1d |
PF00750 |
8.7e-107 |
2 |
| AET3Gv20294400 |
tRNA-synt_1d |
PF00750 |
1.1e-106 |
3 |
| AET3Gv20294400 |
tRNA-synt_1d |
PF00750 |
1.1e-106 |
4 |
| AET3Gv20294400 |
tRNA-synt_1d |
PF00750 |
1.1e-106 |
5 |
| AET3Gv20294400 |
tRNA-synt_1d |
PF00750 |
1.4e-106 |
6 |
| AET3Gv20294400 |
tRNA-synt_1d |
PF00750 |
5e-101 |
7 |
| AET3Gv20294400 |
tRNA-synt_1d |
PF00750 |
8.7e-96 |
8 |
| AET3Gv20294400 |
tRNA-synt_1d |
PF00750 |
5.6e-94 |
9 |
| AET3Gv20294400 |
tRNA-synt_1d |
PF00750 |
9.9e-53 |
10 |
| AET3Gv20294400 |
tRNA-synt_1d |
PF00750 |
9.6e-46 |
11 |
| AET3Gv20294400 |
tRNA-synt_1d |
PF00750 |
7.2e-45 |
12 |
| AET3Gv20294400 |
tRNA-synt_1d |
PF00750 |
3e-44 |
13 |
| AET3Gv20294400 |
tRNA-synt_1d |
PF00750 |
7e-27 |
14 |
| AET3Gv20294400 |
Arg_tRNA_synt_N |
PF03485 |
3.9e-15 |
15 |
| AET3Gv20294400 |
Arg_tRNA_synt_N |
PF03485 |
4.6e-15 |
16 |
| AET3Gv20294400 |
Arg_tRNA_synt_N |
PF03485 |
2.3e-14 |
17 |
| AET3Gv20294400 |
Arg_tRNA_synt_N |
PF03485 |
1.6e-13 |
18 |
| AET3Gv20294400 |
Arg_tRNA_synt_N |
PF03485 |
1.4e-12 |
19 |
| AET3Gv20294400 |
Arg_tRNA_synt_N |
PF03485 |
1.8e-12 |
20 |
| AET3Gv20294400 |
DALR_1 |
PF05746 |
6.6e-31 |
21 |
| AET3Gv20294400 |
DALR_1 |
PF05746 |
6.6e-31 |
22 |
| AET3Gv20294400 |
DALR_1 |
PF05746 |
6.7e-31 |
23 |
| AET3Gv20294400 |
DALR_1 |
PF05746 |
7.8e-31 |
24 |
| AET3Gv20294400 |
DALR_1 |
PF05746 |
8.1e-31 |
25 |
| AET3Gv20294400 |
DALR_1 |
PF05746 |
9.4e-31 |
26 |
| AET3Gv20294400 |
DALR_1 |
PF05746 |
2.5e-18 |
27 |
| AET3Gv20294400 |
DALR_1 |
PF05746 |
1.9e-05 |
28 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| - |
AET3Gv20294400.20 |
629 |
106aa |
AET3Gv20294400 |
| - |
AET3Gv20294400.29 |
1610 |
515aa |
AET3Gv20294400 |
| - |
AET3Gv20294400.24 |
904 |
284aa |
AET3Gv20294400 |
| - |
AET3Gv20294400.14 |
1452 |
483aa |
AET3Gv20294400 |
| - |
AET3Gv20294400.7 |
7306 |
647aa |
AET3Gv20294400 |
| - |
AET3Gv20294400.3 |
7690 |
633aa |
AET3Gv20294400 |
| - |
AET3Gv20294400.19 |
1366 |
238aa |
AET3Gv20294400 |
| - |
AET3Gv20294400.2 |
7298 |
633aa |
AET3Gv20294400 |
| - |
AET3Gv20294400.4 |
4810 |
633aa |
AET3Gv20294400 |
| - |
AET3Gv20294400.23 |
1981 |
422aa |
AET3Gv20294400 |
| - |
AET3Gv20294400.10 |
4696 |
346aa |
AET3Gv20294400 |
| - |
AET3Gv20294400.16 |
1591 |
480aa |
AET3Gv20294400 |
| - |
AET3Gv20294400.30 |
1611 |
324aa |
AET3Gv20294400 |
| - |
AET3Gv20294400.1 |
3361 |
612aa |
AET3Gv20294400 |
| - |
AET3Gv20294400.6 |
1747 |
501aa |
AET3Gv20294400 |
| - |
AET3Gv20294400.11 |
938 |
275aa |
AET3Gv20294400 |
| - |
AET3Gv20294400.12 |
660 |
109aa |
AET3Gv20294400 |
| - |
AET3Gv20294400.27 |
1145 |
210aa |
AET3Gv20294400 |
| - |
AET3Gv20294400.5 |
2199 |
557aa |
AET3Gv20294400 |
| - |
AET3Gv20294400.17 |
1927 |
315aa |
AET3Gv20294400 |
| - |
AET3Gv20294400.8 |
2097 |
204aa |
AET3Gv20294400 |
| - |
AET3Gv20294400.22 |
2068 |
571aa |
AET3Gv20294400 |
| - |
AET3Gv20294400.13 |
1645 |
480aa |
AET3Gv20294400 |
| - |
AET3Gv20294400.9 |
879 |
292aa |
AET3Gv20294400 |
| - |
AET3Gv20294400.31 |
1041 |
304aa |
AET3Gv20294400 |
| - |
AET3Gv20294400.21 |
5153 |
633aa |
AET3Gv20294400 |
| - |
AET3Gv20294400.15 |
1596 |
531aa |
AET3Gv20294400 |
| - |
AET3Gv20294400.25 |
2032 |
293aa |
AET3Gv20294400 |
| - |
AET3Gv20294400.28 |
2404 |
293aa |
AET3Gv20294400 |
| - |
AET3Gv20294400.26 |
1849 |
252aa |
AET3Gv20294400 |
| - |
AET3Gv20294400.18 |
1008 |
318aa |
AET3Gv20294400 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| AET3Gv20294400 | aegilops_tauschii | AET4Gv20150000.1 | 65.3974 | 53.6424 | aegilops_tauschii | AET3Gv20294400.7 | 61.051 | 50.0773 |
| AET3Gv20294400 | aegilops_tauschii | AET4Gv20168800.5 | 46.7797 | 33.3898 | aegilops_tauschii | AET3Gv20294400.7 | 42.6584 | 30.4482 |
| AET3Gv20294400 | aegilops_tauschii | AET3Gv21103500.1 | 29.5775 | 18.3099 | aegilops_tauschii | AET3Gv20294400.7 | 32.4575 | 20.0927 |
| AET3Gv20294400 | aegilops_tauschii | AET3Gv21103400.2 | 52.5424 | 32.9567 | aegilops_tauschii | AET3Gv20294400.7 | 43.1221 | 27.0479 |
| AET3Gv20294400 | aegilops_tauschii | AET4Gv20152300.1 | 54.9902 | 37.9648 | aegilops_tauschii | AET3Gv20294400.7 | 43.4312 | 29.9845 |
| AET3Gv20294400 | aegilops_tauschii | AET3Gv21102500.1 | 53.3708 | 33.7079 | aegilops_tauschii | AET3Gv20294400.7 | 29.3663 | 18.5471 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| AET3Gv20294400 | aegilops_tauschii | AET3Gv20294400.7 | 81.762 | 78.5162 | secale_cereale | SECCE3Rv1G0165200.1 | 90.7376 | 87.1355 |
| AET3Gv20294400 | aegilops_tauschii | AET3Gv20294400.7 | 51.3138 | 36.3215 | sorghum_bicolor | OQU91350 | 59.9278 | 42.4188 |
| AET3Gv20294400 | aegilops_tauschii | AET3Gv20294400.7 | 99.8454 | 99.8454 | triticum_aestivum | TraesCS3D02G136400.1 | 99.8454 | 99.8454 |
| AET3Gv20294400 | aegilops_tauschii | AET3Gv20294400.7 | 88.5626 | 85.626 | triticum_aestivum | TraesCS3A02G310500.1 | 88.0184 | 85.0998 |
| AET3Gv20294400 | aegilops_tauschii | AET3Gv20294400.7 | 88.5626 | 85.626 | triticum_turgidum | TRITD3Av1G048070.1 | 88.0184 | 85.0998 |
| AET3Gv20294400 | aegilops_tauschii | AET3Gv20294400.7 | 57.9598 | 46.2133 | brachypodium_distachyon | KQK14143 | 68.5558 | 54.6618 |
| AET3Gv20294400 | aegilops_tauschii | AET3Gv20294400.7 | 24.575 | 16.6924 | eragrostis_curvula | TVU46116 | 33.3333 | 22.6415 |
| AET3Gv20294400 | aegilops_tauschii | AET3Gv20294400.7 | 20.4019 | 14.0649 | eragrostis_curvula | TVU46090 | 31.2796 | 21.564 |
| AET3Gv20294400 | aegilops_tauschii | AET3Gv20294400.7 | 52.0866 | 39.1036 | leersia_perrieri | LPERR03G21760.1 | 58.3045 | 43.7716 |
| AET3Gv20294400 | aegilops_tauschii | AET3Gv20294400.7 | 44.8223 | 27.9753 | eragrostis_tef | Et_4B_037356.CDS | 17.4594 | 10.897 |
| AET3Gv20294400 | aegilops_tauschii | AET3Gv20294400.7 | 28.4389 | 18.7017 | eragrostis_tef | Et_4A_033185.CDS | 35.1145 | 23.0916 |
| AET3Gv20294400 | aegilops_tauschii | AET3Gv20294400.7 | 48.9954 | 33.5394 | saccharum_spontaneum | Sspon.01G0023540-2B-mRNA-1 | 54.2808 | 37.1575 |
| AET3Gv20294400 | aegilops_tauschii | AET3Gv20294400.7 | 47.6043 | 32.7666 | saccharum_spontaneum | Sspon.01G0023540-3C-mRNA-1:cds | 59.4595 | 40.9266 |
| AET3Gv20294400 | aegilops_tauschii | AET3Gv20294400.7 | 3.86399 | 2.78207 | echinochloa_crusgalli | scaffold61.292.cds | 5.47046 | 3.93873 |
| AET3Gv20294400 | aegilops_tauschii | AET3Gv20294400.7 | 53.9413 | 36.9397 | echinochloa_crusgalli | scaffold286.49.cds | 34.4521 | 23.5933 |
| AET3Gv20294400 | aegilops_tauschii | AET3Gv20294400.7 | 53.1685 | 37.2488 | echinochloa_crusgalli | scaffold55.309.cds | 62.4319 | 43.7387 |
| AET3Gv20294400 | aegilops_tauschii | AET3Gv20294400.7 | 41.8856 | 30.7573 | oryza_brachyantha | OB03G34330.1 | 58.1545 | 42.7039 |
| AET3Gv20294400 | aegilops_tauschii | AET3Gv20294400.7 | 81.4529 | 79.4436 | triticum_aestivum_mace | TraesMAC3A03G01350730.1 | 92.7817 | 90.493 |
| AET3Gv20294400 | aegilops_tauschii | AET3Gv20294400.7 | 69.0881 | 65.9969 | triticum_aestivum_mace | TraesMAC3B03G01592880.1 | 89.5792 | 85.5711 |
| AET3Gv20294400 | aegilops_tauschii | AET3Gv20294400.7 | 77.5889 | 73.7249 | triticum_aestivum_mace | TraesMAC3D03G01838480.1 | 88.5362 | 84.127 |
| AET3Gv20294400 | aegilops_tauschii | AET3Gv20294400.7 | 77.7434 | 77.7434 | triticum_aestivum_arinalrfor | TraesARI3D03G01872510.1 | 99.8016 | 99.8016 |
| AET3Gv20294400 | aegilops_tauschii | AET3Gv20294400.7 | 81.4529 | 79.4436 | triticum_aestivum_arinalrfor | TraesARI3A03G01372450.1 | 92.7817 | 90.493 |
| AET3Gv20294400 | aegilops_tauschii | AET3Gv20294400.7 | 69.0881 | 65.9969 | triticum_aestivum_arinalrfor | TraesARI3B03G01617520.1 | 89.5792 | 85.5711 |
| AET3Gv20294400 | aegilops_tauschii | AET3Gv20294400.7 | 88.0989 | 88.0989 | triticum_aestivum_landmark | TraesLDM3D03G01838410.1 | 99.8249 | 99.8249 |
| AET3Gv20294400 | aegilops_tauschii | AET3Gv20294400.7 | 81.4529 | 79.4436 | triticum_aestivum_landmark | TraesLDM3A03G01355040.1 | 92.7817 | 90.493 |
| AET3Gv20294400 | aegilops_tauschii | AET3Gv20294400.7 | 79.289 | 75.5796 | triticum_aestivum_landmark | TraesLDM3B03G01593520.1 | 89.3728 | 85.1916 |
| AET3Gv20294400 | aegilops_tauschii | AET3Gv20294400.7 | 81.4529 | 79.4436 | triticum_aestivum_julius | TraesJUL3A03G01364230.1 | 92.7817 | 90.493 |
| AET3Gv20294400 | aegilops_tauschii | AET3Gv20294400.7 | 79.289 | 75.5796 | triticum_aestivum_julius | TraesJUL3B03G01606080.1 | 89.3728 | 85.1916 |
| AET3Gv20294400 | aegilops_tauschii | AET3Gv20294400.7 | 78.6708 | 74.8068 | triticum_aestivum_julius | TraesJUL3D03G01857930.2 | 88.676 | 84.3206 |
| AET3Gv20294400 | aegilops_tauschii | AET3Gv20294400.7 | 81.6074 | 79.4436 | triticum_aestivum_norin61 | TraesNOR3A03G01372560.1 | 92.7944 | 90.3339 |
| AET3Gv20294400 | aegilops_tauschii | AET3Gv20294400.7 | 70.6337 | 67.2334 | triticum_aestivum_norin61 | TraesNOR3B03G01613970.1 | 90.495 | 86.1386 |
| AET3Gv20294400 | aegilops_tauschii | AET3Gv20294400.7 | 75.7342 | 72.1793 | triticum_aestivum_norin61 | TraesNOR3D03G01866960.1 | 89.2532 | 85.0638 |
| AET3Gv20294400 | aegilops_tauschii | AET3Gv20294400.7 | 88.0989 | 88.0989 | triticum_aestivum_jagger | TraesJAG3D03G01848650.1 | 99.8249 | 99.8249 |
| AET3Gv20294400 | aegilops_tauschii | AET3Gv20294400.7 | 81.4529 | 79.4436 | triticum_aestivum_jagger | TraesJAG3A03G01361760.1 | 92.7817 | 90.493 |
| AET3Gv20294400 | aegilops_tauschii | AET3Gv20294400.7 | 69.0881 | 65.9969 | triticum_aestivum_jagger | TraesJAG3B03G01602240.1 | 89.5792 | 85.5711 |
| AET3Gv20294400 | aegilops_tauschii | AET3Gv20294400.7 | 88.0989 | 88.0989 | triticum_aestivum_lancer | TraesLAC3D03G01781470.1 | 99.8249 | 99.8249 |
| AET3Gv20294400 | aegilops_tauschii | AET3Gv20294400.7 | 81.4529 | 79.4436 | triticum_aestivum_lancer | TraesLAC3A03G01296350.1 | 92.7817 | 90.493 |
| AET3Gv20294400 | aegilops_tauschii | AET3Gv20294400.7 | 69.0881 | 65.9969 | triticum_aestivum_lancer | TraesLAC3B03G01534920.1 | 89.5792 | 85.5711 |
| AET3Gv20294400 | aegilops_tauschii | AET3Gv20294400.7 | 81.4529 | 79.4436 | triticum_aestivum_stanley | TraesSTA3A03G01343990.1 | 92.7817 | 90.493 |
| AET3Gv20294400 | aegilops_tauschii | AET3Gv20294400.7 | 70.3246 | 67.0788 | triticum_aestivum_stanley | TraesSTA3B03G01584630.1 | 89.7436 | 85.6016 |
| AET3Gv20294400 | aegilops_tauschii | AET3Gv20294400.7 | 78.6708 | 74.8068 | triticum_aestivum_stanley | TraesSTA3D03G01834840.1 | 88.676 | 84.3206 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
