Description

Ensembl ID AET3Gv20294100 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 31284 bases Strand Minus strand
Position 3D : 96459817 - 96491100 RNA binding domain PP2
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
AET3Gv20294100 PP2 PF14299 3.2e-38 1
AET3Gv20294100 PP2 PF14299 1.5e-37 2
AET3Gv20294100 PP2 PF14299 2.2e-37 3
AET3Gv20294100 PP2 PF14299 2.5e-37 4
AET3Gv20294100 PP2 PF14299 5.6e-26 5
AET3Gv20294100 PP2 PF14299 5.6e-26 6
AET3Gv20294100 PP2 PF14299 3.1e-11 7
AET3Gv20294100 PP2 PF14299 2.7e-06 8
AET3Gv20294100 PP2 PF14299 8.9e-06 9

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- AET3Gv20294100.10 871 196aa AET3Gv20294100
- AET3Gv20294100.1 2051 373aa AET3Gv20294100
- AET3Gv20294100.3 823 117aa AET3Gv20294100
- AET3Gv20294100.7 1411 160aa AET3Gv20294100
- AET3Gv20294100.9 1022 175aa AET3Gv20294100
- AET3Gv20294100.4 1048 313aa AET3Gv20294100
- AET3Gv20294100.5 1192 132aa AET3Gv20294100
- AET3Gv20294100.6 440 146aa AET3Gv20294100
- AET3Gv20294100.8 1116 320aa AET3Gv20294100
- AET3Gv20294100.2 757 117aa AET3Gv20294100

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
AET3Gv20294100aegilops_tauschiiAET3Gv21198300.251.498643.3242aegilops_tauschiiAET3Gv20294100.150.670242.6273
AET3Gv20294100aegilops_tauschiiAET7Gv21071100.155.459847.1264aegilops_tauschiiAET3Gv20294100.151.742643.9678

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
AET3Gv20294100aegilops_tauschiiAET3Gv20294100.1100100triticum_aestivumTraesCS3D02G135800.1100100
AET3Gv20294100aegilops_tauschiiAET3Gv20294100.147.989333.244triticum_aestivumTraesCS3B02G607900.157.188539.6166
AET3Gv20294100aegilops_tauschiiAET3Gv20294100.147.989333.244triticum_turgidumTRITD3Bv1G281960.257.188539.6166
AET3Gv20294100aegilops_tauschiiAET3Gv20294100.148.257434.5844brachypodium_distachyonKQJ8761850.139335.9331
AET3Gv20294100aegilops_tauschiiAET3Gv20294100.134.048324.3968hordeum_vulgareHORVU.MOREX.r3.2HG0104380.152.263437.4486
AET3Gv20294100aegilops_tauschiiAET3Gv20294100.133.512123.5925hordeum_vulgareHORVU.MOREX.r3.2HG0104370.151.440336.214
AET3Gv20294100aegilops_tauschiiAET3Gv20294100.133.512123.8606hordeum_vulgareHORVU.MOREX.r3.2HG0104400.147.892734.0996
AET3Gv20294100aegilops_tauschiiAET3Gv20294100.191.420991.4209triticum_aestivum_lancerTraesLAC3D03G01781300.1100100

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression