Description

Ensembl ID AALP_AA8G385300 Gene ID Accession -
Symbol Alias - Full Name DNA-directed RNA polymerase II subunit 7
Status Confidence Length 1928 bases Strand Minus strand
Position 8 : 32698071 - 32699998 RNA binding domain SHS2_Rpb7-N , S1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
KFK27457 SHS2_Rpb7-N PF03876 5.1e-12 1
KFK27457 S1 PF00575 2.9e-17 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- KFK27457 793 166aa KFK27457

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
AALP_AA8G385300

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
AALP_AA8G385300arabis_alpinaKFK2745775.903651.2048chlamydomonas_reinhardtiiPNW7191971.590948.2955
AALP_AA8G385300arabis_alpinaKFK2745795.180788.5542papaver_somniferumRZC4717689.265583.0508
AALP_AA8G385300arabis_alpinaKFK2745775.301267.4699papaver_somniferumRZC6542849.212644.0945
AALP_AA8G385300arabis_alpinaKFK2745784.337377.7108papaver_somniferumRZC4648181.871375.4386
AALP_AA8G385300arabis_alpinaKFK2745795.783189.1566papaver_somniferumRZC4823481.122575.5102
AALP_AA8G385300arabis_alpinaKFK2745792.168778.3133marchantia_polymorphaPTQ3067586.440773.4463
AALP_AA8G385300arabis_alpinaKFK2745792.168785.5422ficus_caricaFCD_00002198-RA:cds9083.5294
AALP_AA8G385300arabis_alpinaKFK2745749.397646.988cannabis_sativa_femalecds.novel_model_130_5bd9a17a95.348890.6977
AALP_AA8G385300arabis_alpinaKFK2745789.75983.1325cannabis_sativa_femalecds.novel_model_124_5bd9a17a85.142978.8571
AALP_AA8G385300arabis_alpinaKFK2745797.590493.3735citrullus_lanatusCla97C01G008470.192.045588.0682
AALP_AA8G385300arabis_alpinaKFK2745792.168785.5422beta_vulgarisKMT0516891.616885.0299
AALP_AA8G385300arabis_alpinaKFK2745781.325377.7108cucumis_meloMELO3C027194.2.193.7589.5833
AALP_AA8G385300arabis_alpinaKFK2745797.590493.3735cucumis_sativusKGN5088492.045588.0682
AALP_AA8G385300arabis_alpinaKFK2745796.98893.3735populus_trichocarpaPotri.001G377200.1.v4.191.477388.0682
AALP_AA8G385300arabis_alpinaKFK2745798.795296.3855arabidopsis_thalianaAT5G59180.193.181890.9091
AALP_AA8G385300arabis_alpinaKFK2745796.385590.9639malus_domestica_goldenmRNA:MD06G020100090.909185.7955
AALP_AA8G385300arabis_alpinaKFK2745796.385590.9639malus_domestica_goldenmRNA:MD14G021450090.909185.7955
AALP_AA8G385300arabis_alpinaKFK2745798.795297.5904brassica_napusCDY3266392.655491.5254
AALP_AA8G385300arabis_alpinaKFK2745790.361484.9398brassica_napusCDX8030284.269779.2135
AALP_AA8G385300arabis_alpinaKFK2745787.951875.9036brassica_napusCDX8868282.485971.1864
AALP_AA8G385300arabis_alpinaKFK2745789.156678.3133brassica_napusCDX7113783.146173.0337
AALP_AA8G385300arabis_alpinaKFK2745786.144673.494brassica_napusCDY3921882.183970.1149
AALP_AA8G385300arabis_alpinaKFK2745797.590494.5783brassica_napusCDY3301278.260975.8454
AALP_AA8G385300arabis_alpinaKFK2745798.795297.5904brassica_napusCDY0286598.203697.006
AALP_AA8G385300arabis_alpinaKFK2745746.98845.1807prunus_dulcisVVA3463195.121991.4634
AALP_AA8G385300arabis_alpinaKFK2745795.783192.1687prunus_persicaONI0953490.340986.9318
AALP_AA8G385300arabis_alpinaKFK2745796.385592.1687prunus_persicaONI1378590.909186.9318
AALP_AA8G385300arabis_alpinaKFK2745796.385590.9639cajanus_cajanC.cajan_38229.t89.385584.3575
AALP_AA8G385300arabis_alpinaKFK2745796.98889.759lupinus_angustifoliusOIW0142568.510663.4043
AALP_AA8G385300arabis_alpinaKFK2745796.98890.9639lupinus_angustifoliusOIW1422991.477385.7955
AALP_AA8G385300arabis_alpinaKFK2745796.98891.5663glycine_maxKRH4235691.477386.3636
AALP_AA8G385300arabis_alpinaKFK2745796.385590.9639medicago_truncatulaAES9069990.909185.7955
AALP_AA8G385300arabis_alpinaKFK2745796.385589.759vigna_angularisKOM4632490.909184.6591
AALP_AA8G385300arabis_alpinaKFK2745796.98891.5663pisum_sativumPsat7g090040.1.cds91.477386.3636
AALP_AA8G385300arabis_alpinaKFK2745796.98891.5663phaseolus_vulgarisESW3092291.477386.3636
AALP_AA8G385300arabis_alpinaKFK2745796.98891.5663vigna_unguiculataVigun03g149100.1.v1.291.477386.3636
AALP_AA8G385300arabis_alpinaKFK2745795.783188.5542vigna_unguiculataVigun08g216400.1.v1.290.340983.5227
AALP_AA8G385300arabis_alpinaKFK2745798.192893.9759manihot_esculentaOAY5782392.613688.6364
AALP_AA8G385300arabis_alpinaKFK2745795.180789.759solanum_lycopersicumSolyc06g005790.3.189.265584.1808
AALP_AA8G385300arabis_alpinaKFK2745795.180789.759solanum_tuberosumPGSC0003DMT40005368294.610889.2216
AALP_AA8G385300arabis_alpinaKFK2745795.180789.759capsicum_annuumPHT7812089.265584.1808
AALP_AA8G385300arabis_alpinaKFK2745787.349480.1205sesamum_indicumSIN_1024205.t85.294178.2353
AALP_AA8G385300arabis_alpinaKFK2745784.337379.5181sesamum_indicumSIN_1015068.t95.238189.7959
AALP_AA8G385300arabis_alpinaKFK2745795.180789.1566helianthus_annuusmRNA:HanXRQr2_Chr09g038815189.265583.6158
AALP_AA8G385300arabis_alpinaKFK2745795.180789.1566helianthus_annuusmRNA:HanXRQr2_Chr09g037824189.265583.6158
AALP_AA8G385300arabis_alpinaKFK2745795.180789.759lactuca_sativacds-PLY69413.194.610889.2216
AALP_AA8G385300arabis_alpinaKFK2745794.578387.3494avena_sativa_sangAVESA.00010b.r2.1AG0053440.1.CDS88.700681.9209
AALP_AA8G385300arabis_alpinaKFK2745794.578387.3494avena_sativa_sangAVESA.00010b.r2.1DG0172120.1.CDS88.700681.9209
AALP_AA8G385300arabis_alpinaKFK2745794.578387.3494avena_sativa_sangAVESA.00010b.r2.1AG0021320.1.CDS88.700681.9209
AALP_AA8G385300arabis_alpinaKFK2745794.578387.3494avena_sativa_ot3098cds.AVESA.00001b.r3.1Ag0002694.188.700681.9209
AALP_AA8G385300arabis_alpinaKFK2745794.578387.3494avena_sativa_ot3098cds.AVESA.00001b.r3.1Ag0001183.188.700681.9209
AALP_AA8G385300arabis_alpinaKFK2745784.337378.9157lolium_perennecds.KYUSt_chr1.288088074.8571
AALP_AA8G385300arabis_alpinaKFK2745757.228951.8072oryza_longistaminataKN542493.1_FGP00185.585677.4775
AALP_AA8G385300arabis_alpinaKFK2745747.590442.1687oryza_longistaminataAMDW01031909.1_FGP00184.042674.4681
AALP_AA8G385300arabis_alpinaKFK2745795.180787.3494oryza_brachyanthaOB05G23650.168.995663.3188
AALP_AA8G385300arabis_alpinaKFK2745795.180786.747oryza_rufipogonORUFI05G16880.189.265581.3559
AALP_AA8G385300arabis_alpinaKFK2745795.180786.747oryza_punctataOPUNC05G13840.189.265581.3559
AALP_AA8G385300arabis_alpinaKFK2745795.180786.747oryza_glaberrimaORGLA05G0136300.189.265581.3559
AALP_AA8G385300arabis_alpinaKFK2745795.180787.9518sorghum_bicolorEES0236589.265582.4859
AALP_AA8G385300arabis_alpinaKFK2745795.180787.9518sorghum_bicolorEES1949389.265582.4859
AALP_AA8G385300arabis_alpinaKFK2745793.975988.5542secale_cerealeSECCE1Rv1G0036640.188.135683.0508
AALP_AA8G385300arabis_alpinaKFK2745795.180787.9518setaria_viridisTKW2743089.265582.4859
AALP_AA8G385300arabis_alpinaKFK2745795.180787.9518setaria_italicaKQL1558255.830451.5901
AALP_AA8G385300arabis_alpinaKFK2745793.975987.9518asparagus_officinalisONK6537788.135682.4859
AALP_AA8G385300arabis_alpinaKFK2745787.349480.7229asparagus_officinalisONK7638053.903349.8141
AALP_AA8G385300arabis_alpinaKFK2745795.180787.9518zea_maysZm00001eb287570_P00289.265582.4859
AALP_AA8G385300arabis_alpinaKFK2745793.975988.5542triticum_aestivumTraesCS1A02G250900.188.135683.0508
AALP_AA8G385300arabis_alpinaKFK2745793.975988.5542triticum_aestivumTraesCS1D02G250500.188.135683.0508
AALP_AA8G385300arabis_alpinaKFK2745793.975988.5542triticum_aestivumTraesCS1B02G261500.188.135683.0508
AALP_AA8G385300arabis_alpinaKFK2745795.180789.759ananas_comosusAco008169.1.mrna189.265584.1808
AALP_AA8G385300arabis_alpinaKFK2745774.096451.2048homo_sapiensENSP0000030178871.511649.4186
AALP_AA8G385300arabis_alpinaKFK2745771.084363.8554amborella_trichopodaERM9364180.272172.1088
AALP_AA8G385300arabis_alpinaKFK2745773.49453.012drosophila_melanogasterFBpp008259170.520250.8671
AALP_AA8G385300arabis_alpinaKFK2745793.975988.5542triticum_turgidumTRITD1Bv1G146300.188.135683.0508
AALP_AA8G385300arabis_alpinaKFK2745793.975988.5542triticum_turgidumTRITD1Av1G160720.188.135683.0508
AALP_AA8G385300arabis_alpinaKFK2745794.578389.1566brachypodium_distachyonKQK0635588.700683.6158
AALP_AA8G385300arabis_alpinaKFK2745773.49450.6024caenorhabditis_elegansY54E10BR.6.161.928942.6396
AALP_AA8G385300arabis_alpinaKFK2745795.783191.5663gossypium_raimondiiKJB2164490.340986.3636
AALP_AA8G385300arabis_alpinaKFK2745782.530179.5181gossypium_raimondiiKJB5578293.197389.7959
AALP_AA8G385300arabis_alpinaKFK2745796.385593.3735corylus_avellanaCav01g03570.t190.909188.0682
AALP_AA8G385300arabis_alpinaKFK2745793.975988.5542triticum_urartuTuG1812G0100002903.01.T0188.135683.0508
AALP_AA8G385300arabis_alpinaKFK2745796.385590.3614vitis_viniferaVitvi06g00539_P00190.909185.2273
AALP_AA8G385300arabis_alpinaKFK2745794.578387.3494eragrostis_curvulaTVU1930865.145260.166
AALP_AA8G385300arabis_alpinaKFK2745795.783189.759ipomoea_trilobaitb09g24390.t389.830584.1808
AALP_AA8G385300arabis_alpinaKFK2745795.180786.747oryza_sativaOs05t0400700-0189.265581.3559
AALP_AA8G385300arabis_alpinaKFK2745795.180786.747oryza_meridionalisOMERI05G13660.189.265581.3559
AALP_AA8G385300arabis_alpinaKFK2745792.168782.5301fraxinus_excelsiorFRAEX38873_v2_000134200.1.cds86.440777.4011
AALP_AA8G385300arabis_alpinaKFK2745795.180790.9639fraxinus_excelsiorFRAEX38873_v2_000194640.1.cds89.265585.3107
AALP_AA8G385300arabis_alpinaKFK2745792.168782.5301fraxinus_excelsiorFRAEX38873_v2_000385180.1.cds86.440777.4011
AALP_AA8G385300arabis_alpinaKFK2745795.180786.747oryza_indicaBGIOSGA018095-PA89.265581.3559
AALP_AA8G385300arabis_alpinaKFK2745795.180786.747oryza_indicaBGIOSGA018093-PA89.265581.3559
AALP_AA8G385300arabis_alpinaKFK2745795.180786.747oryza_glumipatulaOGLUM05G16620.189.265581.3559
AALP_AA8G385300arabis_alpinaKFK2745795.180786.747oryza_barthiiOBART05G15700.189.265581.3559
AALP_AA8G385300arabis_alpinaKFK2745795.180789.759cynara_cardunculusKVI0349484.042679.2553
AALP_AA8G385300arabis_alpinaKFK2745793.373586.747dioscorea_rotundataDRNTG_06786.187.570681.3559
AALP_AA8G385300arabis_alpinaKFK2745772.891650ciona_savignyiENSCSAVP0000000449770.348848.2558
AALP_AA8G385300arabis_alpinaKFK2745798.795296.3855eutrema_salsugineumESQ4245192.655490.3955
AALP_AA8G385300arabis_alpinaKFK2745796.385592.7711prunus_aviumPav_sc0000052.1_g540.1.mk:mrna90.909187.5
AALP_AA8G385300arabis_alpinaKFK2745796.98892.1687quercus_lobataQL12p009539:mrna91.477386.9318
AALP_AA8G385300arabis_alpinaKFK2745766.867543.9759galdieria_sulphurariaEME2679064.161842.1965
AALP_AA8G385300arabis_alpinaKFK2745798.795297.5904brassica_rapa_ro18A02p012850.1_BraROA.192.655491.5254
AALP_AA8G385300arabis_alpinaKFK2745789.75977.1084brassica_rapa_ro18A03p012360.1_BraROA.184.180872.3164
AALP_AA8G385300arabis_alpinaKFK2745794.578390.9639brassica_rapa_ro18A10p022550.1_BraROA.191.279187.7907
AALP_AA8G385300arabis_alpinaKFK2745762.048236.747saccharomyces_cerevisiaeYDR404C60.233935.6725
AALP_AA8G385300arabis_alpinaKFK2745793.975988.5542aegilops_tauschiiAET1Gv20611200.173.584969.3396
AALP_AA8G385300arabis_alpinaKFK2745780.722976.506eucalyptus_grandisKCW5262897.810292.7007
AALP_AA8G385300arabis_alpinaKFK2745793.975987.9518pistacia_veracds-EVM0019858.188.636482.9545
AALP_AA8G385300arabis_alpinaKFK2745797.590493.3735juglans_regiacds.Jr05_07980_p192.045588.0682
AALP_AA8G385300arabis_alpinaKFK2745795.180787.9518saccharum_spontaneumSspon.07G0035450-1D-mRNA-161.478656.8093
AALP_AA8G385300arabis_alpinaKFK2745783.734977.7108saccharum_spontaneumSspon.03G0022110-4D-mRNA-1:cds89.102682.6923
AALP_AA8G385300arabis_alpinaKFK2745784.337379.5181nicotiana_attenuataOIT0227695.238189.7959
AALP_AA8G385300arabis_alpinaKFK2745795.783189.759nicotiana_attenuataOIT0677695.209689.2216
AALP_AA8G385300arabis_alpinaKFK2745793.975988.5542triticum_dicoccoidesTRIDC1AG037600.180.412475.7732
AALP_AA8G385300arabis_alpinaKFK2745793.975988.5542triticum_dicoccoidesTRIDC1BG042790.188.135683.0508
AALP_AA8G385300arabis_alpinaKFK2745795.180790.3614olea_europaeaOE9A057200C389.265584.7458
AALP_AA8G385300arabis_alpinaKFK2745757.228948.7952olea_europaeaOE9A011856C181.896669.8276
AALP_AA8G385300arabis_alpinaKFK2745789.75980.1205selaginella_moellendorffiiEFJ3173984.180875.1412
AALP_AA8G385300arabis_alpinaKFK2745789.75980.1205selaginella_moellendorffiiEFJ3841184.180875.1412
AALP_AA8G385300arabis_alpinaKFK2745793.975988.5542musa_acuminataMa04_p24260.188.135683.0508
AALP_AA8G385300arabis_alpinaKFK2745772.891667.4699eragrostis_tefEt_9A_063224.CDS77.070171.3376
AALP_AA8G385300arabis_alpinaKFK2745794.578387.3494eragrostis_tefEt_9B_065832.CDS80.512874.359
AALP_AA8G385300arabis_alpinaKFK2745793.975987.9518actinidia_chinensisPSR9508388.135682.4859
AALP_AA8G385300arabis_alpinaKFK2745796.98892.1687quercus_subercds-POE95265.191.477386.9318
AALP_AA8G385300arabis_alpinaKFK2745798.795298.1928camelina_sativaCsa18g032410.193.181892.6136
AALP_AA8G385300arabis_alpinaKFK2745798.795297.5904camelina_sativaCsa02g064820.193.181892.0455
AALP_AA8G385300arabis_alpinaKFK2745798.795298.1928camelina_sativaCsa11g092930.193.181892.6136
AALP_AA8G385300arabis_alpinaKFK2745793.975988.5542hordeum_vulgareHORVU.MOREX.r3.1HG0063540.188.135683.0508
AALP_AA8G385300arabis_alpinaKFK2745785.542280.1205daucus_carotaKZN0658575.935871.123
AALP_AA8G385300arabis_alpinaKFK2745781.927775.3012leersia_perrieriLPERR05G12460.187.741980.6452
AALP_AA8G385300arabis_alpinaKFK2745770.481950ostreococcus_lucimarinusABO9843365.363146.3687
AALP_AA8G385300arabis_alpinaKFK2745796.98892.1687theobroma_cacaoEOY3391691.477386.9318
AALP_AA8G385300arabis_alpinaKFK2745795.180788.5542citrus_clementinaESR3816089.772783.5227
AALP_AA8G385300arabis_alpinaKFK2745783.132577.1084nymphaea_colorataNC11G0121610.1:cds55.251.2
AALP_AA8G385300arabis_alpinaKFK2745794.578387.3494echinochloa_crusgalliscaffold148.16.cds62.858
AALP_AA8G385300arabis_alpinaKFK2745795.180787.9518echinochloa_crusgalliscaffold8.718.cds57.875553.4799
AALP_AA8G385300arabis_alpinaKFK2745795.180787.9518echinochloa_crusgalliscaffold123.197.cds89.265582.4859
AALP_AA8G385300arabis_alpinaKFK2745788.554280.1205echinochloa_crusgalliscaffold8.728.cds81.215573.4807
AALP_AA8G385300arabis_alpinaKFK2745790.361485.5422brassica_oleraceaBo9g137010.181.967277.5956
AALP_AA8G385300arabis_alpinaKFK2745798.795297.5904brassica_oleraceaBo2g026980.192.655491.5254
AALP_AA8G385300arabis_alpinaKFK2745788.554277.1084brassica_oleraceaBo3g018380.175.384665.641
AALP_AA8G385300arabis_alpinaKFK2745792.168786.1446chenopodium_quinoaAUR62020050-RA:cds91.616885.6287
AALP_AA8G385300arabis_alpinaKFK2745790.963980.1205physcomitrium_patensPp3c6_9100V3.185.310775.1412
AALP_AA8G385300arabis_alpinaKFK2745795.180787.9518panicum_halliiPUZ6608789.265582.4859
AALP_AA8G385300arabis_alpinaKFK2745796.98891.5663trifolium_pratenseTp57577_TGAC_v2_mRNA510291.477386.3636
AALP_AA8G385300arabis_alpinaKFK2745795.783192.1687corchorus_capsularisOMO6199295.783192.1687
AALP_AA8G385300arabis_alpinaKFK2745799.397698.7952arabidopsis_hallerig11050.t193.7593.1818
AALP_AA8G385300arabis_alpinaKFK2745750.602445.7831digitaria_exilisDexi3B01G0025210.1:cds83.168375.2475
AALP_AA8G385300arabis_alpinaKFK2745750.602445.7831digitaria_exilisDexi3A01G0024530.1:cds83.168375.2475
AALP_AA8G385300arabis_alpinaKFK2745799.397698.7952arabidopsis_lyratascaffold_802535.193.7593.1818
AALP_AA8G385300arabis_alpinaKFK2745787.951878.9157rosa_chinensisPRQ2623682.485974.0113
AALP_AA8G385300arabis_alpinaKFK2745796.385591.5663rosa_chinensisPRQ5004190.909186.3636
AALP_AA8G385300arabis_alpinaKFK2745759.638636.747cyanidioschyzon_merolaeCMD026CT56.896635.0575
AALP_AA8G385300arabis_alpinaKFK2745796.98892.7711corymbia_citriodoracds-KAF8010769.191.477387.5
AALP_AA8G385300arabis_alpinaKFK2745795.180791.5663kalanchoe_fedtschenkoiKaladp0158s0007.1.v1.189.772786.3636
AALP_AA8G385300arabis_alpinaKFK2745792.771189.1566kalanchoe_fedtschenkoiKaladp0099s0099.1.v1.187.584.0909
AALP_AA8G385300arabis_alpinaKFK2745795.180788.5542coffea_canephoraCDP0911389.265583.0508
AALP_AA8G385300arabis_alpinaKFK2745795.180786.747oryza_nivaraONIVA05G16300.180.612273.4694

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression