Description

Ensembl ID AALP_AA5G071300 Gene ID Accession -
Symbol Alias - Full Name Probable CCR4-associated factor 1 homolog 9
Status Confidence Length 1333 bases Strand Minus strand
Position 5 : 5047277 - 5048609 RNA binding domain CAF1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
KFK33873 CAF1 PF04857 1.7e-14 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- KFK33873 1333 279aa KFK33873

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
AALP_AA5G071300arabis_alpinaKFK2633384.892177.3381arabis_alpinaKFK3387384.587877.0609
AALP_AA5G071300arabis_alpinaKFK3969538.905826.1398arabis_alpinaKFK3387345.878130.8244
AALP_AA5G071300arabis_alpinaKFK4296235.824723.1959arabis_alpinaKFK3387349.820832.2581
AALP_AA5G071300arabis_alpinaKFK4383266.544145.5882arabis_alpinaKFK3387364.874544.4444

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
AALP_AA5G071300arabis_alpinaKFK3387360.215144.086chlamydomonas_reinhardtiiPNW8475063.878346.7681
AALP_AA5G071300arabis_alpinaKFK3387376.702561.6487papaver_somniferumRZC7834478.388363.0037
AALP_AA5G071300arabis_alpinaKFK3387378.136263.4409papaver_somniferumRZC8411877.857163.2143
AALP_AA5G071300arabis_alpinaKFK3387380.286769.8925ficus_caricaFCD_00027992-RA:cds80.866470.3971
AALP_AA5G071300arabis_alpinaKFK3387379.211569.1756cannabis_sativa_femalecds.novel_model_4602_5bd9a17a78.368868.4397
AALP_AA5G071300arabis_alpinaKFK3387350.179243.7276citrullus_lanatusCla97C02G048450.185.365974.3902
AALP_AA5G071300arabis_alpinaKFK3387368.458855.1971beta_vulgarisKMT0492181.623965.812
AALP_AA5G071300arabis_alpinaKFK3387372.401458.4229cucumis_meloMELO3C014512.2.178.294663.1783
AALP_AA5G071300arabis_alpinaKFK3387375.627259.1398cucumis_sativusKGN4804279.622662.2642
AALP_AA5G071300arabis_alpinaKFK3387381.720470.6093populus_trichocarpaPotri.009G161500.1.v4.182.310571.1191
AALP_AA5G071300arabis_alpinaKFK3387381.36270.9677populus_trichocarpaPotri.004G200400.2.v4.181.949571.4801
AALP_AA5G071300arabis_alpinaKFK3387388.530582.7957arabidopsis_thalianaAT3G44260.188.214382.5
AALP_AA5G071300arabis_alpinaKFK3387381.36272.043malus_domestica_goldenCDS:MD03G0126000.180.21271.0247
AALP_AA5G071300arabis_alpinaKFK3387381.720472.7599malus_domestica_goldenCDS:MD03G0126100.180.565471.7314
AALP_AA5G071300arabis_alpinaKFK3387387.455281.7204brassica_napusCDY4729989.705983.8235
AALP_AA5G071300arabis_alpinaKFK3387389.964282.7957brassica_napusCDY0868889.964282.7957
AALP_AA5G071300arabis_alpinaKFK3387354.480348.7455brassica_junceacds.BjuB08g13900S88.372179.0698
AALP_AA5G071300arabis_alpinaKFK3387332.258130.8244brassica_junceacds.BjuB08g13890S88.235384.3137
AALP_AA5G071300arabis_alpinaKFK3387386.738381.362brassica_junceacds.BjuA06g23450S88.970683.4559
AALP_AA5G071300arabis_alpinaKFK3387380.645272.043prunus_dulcisVVA3387579.505371.0247
AALP_AA5G071300arabis_alpinaKFK3387380.645272.043prunus_persicaONI0143679.505371.0247
AALP_AA5G071300arabis_alpinaKFK3387361.290353.405cajanus_cajanC.cajan_21682.t81.818271.2919
AALP_AA5G071300arabis_alpinaKFK3387360.573553.0466cajanus_cajanC.cajan_36839.t73.799164.6288
AALP_AA5G071300arabis_alpinaKFK3387337.27632.6165cajanus_cajanC.cajan_21749.t.cds181.889871.6535
AALP_AA5G071300arabis_alpinaKFK3387375.627262.3656lupinus_angustifoliusOIW0847367.197455.414
AALP_AA5G071300arabis_alpinaKFK3387377.419465.9498glycine_maxKRH2529477.697866.187
AALP_AA5G071300arabis_alpinaKFK3387378.136267.0251glycine_maxKRH3037676.760665.8451
AALP_AA5G071300arabis_alpinaKFK3387377.777864.5161glycine_maxKRH2264769.551357.6923
AALP_AA5G071300arabis_alpinaKFK3387378.136267.3835glycine_maxKRH2666970.550260.8414
AALP_AA5G071300arabis_alpinaKFK3387376.344164.8745vigna_angularisKOM5050566.771256.7398
AALP_AA5G071300arabis_alpinaKFK3387379.569964.5161vigna_angularisKOM4404677.083362.5
AALP_AA5G071300arabis_alpinaKFK3387378.494662.0072phaseolus_vulgarisESW2203469.745255.0955
AALP_AA5G071300arabis_alpinaKFK3387375.268863.0824phaseolus_vulgarisESW0447175.539663.3094
AALP_AA5G071300arabis_alpinaKFK3387378.136262.724vigna_unguiculataVigun05g233700.1.v1.2.CDS.169.426855.7325
AALP_AA5G071300arabis_alpinaKFK3387376.702565.233vigna_unguiculataVigun11g123300.5.v1.273.793162.7586
AALP_AA5G071300arabis_alpinaKFK3387381.36271.3262manihot_esculentaOAY3824181.071471.0714
AALP_AA5G071300arabis_alpinaKFK3387380.286766.6667solanum_lycopersicumSolyc11g068770.1.1.178.596565.2632
AALP_AA5G071300arabis_alpinaKFK3387375.985765.233solanum_lycopersicumSolyc06g074030.1.1.180.30368.9394
AALP_AA5G071300arabis_alpinaKFK3387378.494667.7419solanum_tuberosumPGSC0003DMT40001509182.022570.7865
AALP_AA5G071300arabis_alpinaKFK3387378.853167.0251solanum_tuberosumPGSC0003DMT40005048777.19365.614
AALP_AA5G071300arabis_alpinaKFK3387379.569967.3835sesamum_indicumSIN_1010597.t.cds179.003666.9039
AALP_AA5G071300arabis_alpinaKFK3387379.569967.7419sesamum_indicumSIN_1015098.t.cds180.144468.231
AALP_AA5G071300arabis_alpinaKFK3387357.347747.3118helianthus_annuusCDS:HanXRQr2_Chr07g0298441.166.3954.7718
AALP_AA5G071300arabis_alpinaKFK3387377.419466.6667helianthus_annuusCDS:HanXRQr2_Chr17g0786981.179.704868.6347
AALP_AA5G071300arabis_alpinaKFK3387378.136265.5914helianthus_annuusCDS:HanXRQr2_Chr12g0544061.178.985566.3043
AALP_AA5G071300arabis_alpinaKFK3387374.910463.4409helianthus_annuusCDS:HanXRQr2_Chr06g0253001.175.724664.1304
AALP_AA5G071300arabis_alpinaKFK3387377.419463.0824lactuca_sativacds-PLY73747.177.978363.5379
AALP_AA5G071300arabis_alpinaKFK3387379.211565.233lactuca_sativacds-PLY62633.179.783465.704
AALP_AA5G071300arabis_alpinaKFK3387360.931945.8781avena_sativa_sangAVESA.00010b.r2.5DG0935720.1.CDS.141.975331.6049
AALP_AA5G071300arabis_alpinaKFK3387360.931945.5197avena_sativa_sangAVESA.00010b.r2.4CG1251070.1.CDS.141.262130.8252
AALP_AA5G071300arabis_alpinaKFK3387360.931945.5197avena_sativa_sangAVESA.00010b.r2.6AG1073820.1.CDS.141.666731.1275
AALP_AA5G071300arabis_alpinaKFK3387360.931945.5197avena_sativa_ot3098cds.AVESA.00001b.r3.6Ag0003359.141.666731.1275
AALP_AA5G071300arabis_alpinaKFK3387360.931945.8781avena_sativa_ot3098cds.AVESA.00001b.r3.5Dg0003417.441.871931.5271
AALP_AA5G071300arabis_alpinaKFK3387359.498244.4444lolium_perennecds.KYUSt_chr2.5093445.7334.1598
AALP_AA5G071300arabis_alpinaKFK3387346.953434.767oryza_longistaminataKN538681.1_FGP07259.00943.6937
AALP_AA5G071300arabis_alpinaKFK3387363.082446.595oryza_brachyanthaOB04G37140.154.153840
AALP_AA5G071300arabis_alpinaKFK3387362.007247.3118oryza_rufipogonORUFI04G31890.152.583640.1216
AALP_AA5G071300arabis_alpinaKFK3387362.007246.595oryza_punctataOPUNC04G27730.153.067539.8773
AALP_AA5G071300arabis_alpinaKFK3387362.365647.3118oryza_glaberrimaORGLA04G0265400.152.887540.1216
AALP_AA5G071300arabis_alpinaKFK3387357.706144.8029sorghum_bicolorEES1168448.059737.3134
AALP_AA5G071300arabis_alpinaKFK3387359.856644.086secale_cerealeSECCE2Rv1G0139380.1.CDS.152.351138.558
AALP_AA5G071300arabis_alpinaKFK3387362.72447.6702setaria_viridisTKW2379660.975646.3415
AALP_AA5G071300arabis_alpinaKFK3387362.72447.6702setaria_italicaKQL1270360.975646.3415
AALP_AA5G071300arabis_alpinaKFK3387372.759955.914asparagus_officinalisONK7144373.818256.7273
AALP_AA5G071300arabis_alpinaKFK3387359.498243.7276triticum_aestivumTraesCS2A02G583000.1.cds151.234637.6543
AALP_AA5G071300arabis_alpinaKFK3387359.856643.7276triticum_aestivumTraesCS2B02G603600.1.cds151.384637.5385
AALP_AA5G071300arabis_alpinaKFK3387359.856644.4444triticum_aestivumTraesCS2D02G597200.1.cds151.070337.9205
AALP_AA5G071300arabis_alpinaKFK3387363.082447.6702ananas_comosusAco022085.1.mrna1.cds165.427549.4424
AALP_AA5G071300arabis_alpinaKFK3387362.72446.9534ananas_comosusAco017703.1.mrna1.cds147.297335.4054
AALP_AA5G071300arabis_alpinaKFK3387362.365646.595ananas_comosusAco031049.1.mrna1.cds159.793844.6735
AALP_AA5G071300arabis_alpinaKFK3387364.516147.3118ananas_comosusAco016750.1.mrna150.420236.9748
AALP_AA5G071300arabis_alpinaKFK3387356.989243.7276ananas_comosusAco020076.1.mrna158.029244.5255
AALP_AA5G071300arabis_alpinaKFK3387359.856641.9355homo_sapiensENSP0000035527958.596541.0526
AALP_AA5G071300arabis_alpinaKFK3387361.290341.5771homo_sapiensENSP0000028589658.561639.726
AALP_AA5G071300arabis_alpinaKFK3387368.458852.6882amborella_trichopodaERN1618771.003754.6468
AALP_AA5G071300arabis_alpinaKFK3387369.53453.7634amborella_trichopodaERN1618671.586755.3506
AALP_AA5G071300arabis_alpinaKFK3387338.351327.957amborella_trichopodaERN0823966.049448.1481
AALP_AA5G071300arabis_alpinaKFK3387358.781440.5018drosophila_melanogasterFBpp031108945.429431.3019
AALP_AA5G071300arabis_alpinaKFK3387360.215143.7276triticum_turgidumTRITD2Bv1G259630.151.692337.5385
AALP_AA5G071300arabis_alpinaKFK3387359.498243.7276triticum_turgidumTRITD2Av1G289970.151.234637.6543
AALP_AA5G071300arabis_alpinaKFK3387359.856643.0108brachypodium_distachyonKQJ8537347.308833.9943
AALP_AA5G071300arabis_alpinaKFK3387354.838737.6344caenorhabditis_elegansY56A3A.20.149.354833.871
AALP_AA5G071300arabis_alpinaKFK3387381.720468.8172gossypium_raimondiiKJB2173981.428668.5714
AALP_AA5G071300arabis_alpinaKFK3387380.645266.3082gossypium_raimondiiKJB0910981.521767.029
AALP_AA5G071300arabis_alpinaKFK3387381.003669.1756gossypium_raimondiiKJB3541780.42768.6833
AALP_AA5G071300arabis_alpinaKFK3387379.928369.8925corylus_avellanaCav10g04380.t1.cds180.797170.6522
AALP_AA5G071300arabis_alpinaKFK3387381.003671.6846vitis_viniferaVitvi06g01546_P00181.29571.9424
AALP_AA5G071300arabis_alpinaKFK3387361.648745.5197eragrostis_curvulaTVU1666948.450735.7746
AALP_AA5G071300arabis_alpinaKFK3387379.928367.0251ipomoea_trilobaitb04g31780.t179.359466.548
AALP_AA5G071300arabis_alpinaKFK3387355.91445.1613ipomoea_trilobaitb04g31790.t163.934451.6393
AALP_AA5G071300arabis_alpinaKFK3387362.007247.3118oryza_sativaOs04t0684900-0252.583640.1216
AALP_AA5G071300arabis_alpinaKFK3387351.971344.086fraxinus_excelsiorFRAEX38873_v2_000231930.1.cds182.857170.2857
AALP_AA5G071300arabis_alpinaKFK3387379.211565.233fraxinus_excelsiorFRAEX38873_v2_000184220.1.cds178.928665
AALP_AA5G071300arabis_alpinaKFK3387379.211564.8745fraxinus_excelsiorFRAEX38873_v2_000234300.1.cds178.091963.9576
AALP_AA5G071300arabis_alpinaKFK3387381.003668.1004fraxinus_excelsiorFRAEX38873_v2_000231230.1.cds179.298266.6667
AALP_AA5G071300arabis_alpinaKFK3387378.853165.233fraxinus_excelsiorFRAEX38873_v2_000115680.1.cds177.738564.311
AALP_AA5G071300arabis_alpinaKFK3387362.007247.3118oryza_indicaBGIOSGA017385-PA52.583640.1216
AALP_AA5G071300arabis_alpinaKFK3387362.007247.3118oryza_glumipatulaOGLUM04G30110.152.583640.1216
AALP_AA5G071300arabis_alpinaKFK3387348.028737.276oryza_barthiiOBART04G30220.150.950639.5437
AALP_AA5G071300arabis_alpinaKFK3387378.853164.5161cynara_cardunculusKVH9558779.422464.9819
AALP_AA5G071300arabis_alpinaKFK3387377.419463.0824cynara_cardunculusKVI0563877.978363.5379
AALP_AA5G071300arabis_alpinaKFK3387357.706142.6523ciona_savignyiENSCSAVP0000000348757.542.5
AALP_AA5G071300arabis_alpinaKFK3387386.738381.0036eutrema_salsugineumESQ459318882.1818
AALP_AA5G071300arabis_alpinaKFK3387322.222220.0717prunus_aviumPav_sc0002115.1_g100.1.mk:CDS:191.176582.3529
AALP_AA5G071300arabis_alpinaKFK3387380.645271.6846prunus_aviumPav_sc0000271.1_g230.1.mk:mrna40.10735.6506
AALP_AA5G071300arabis_alpinaKFK3387379.211569.534quercus_lobataQL93p2014_0010:mrna:CDS:179.783470.0361
AALP_AA5G071300arabis_alpinaKFK3387379.211569.8925quercus_lobataQL01p011650:mrna:CDS:179.783470.3971
AALP_AA5G071300arabis_alpinaKFK3387362.365646.595galdieria_sulphurariaEME3073657.049242.623
AALP_AA5G071300arabis_alpinaKFK3387356.989232.9749saccharomyces_cerevisiaeYNR052C36.720621.2471
AALP_AA5G071300arabis_alpinaKFK3387359.856644.4444aegilops_tauschiiAET2Gv21250100.157.191842.4658
AALP_AA5G071300arabis_alpinaKFK3387379.928371.3262eucalyptus_grandisKCW8733178.245669.8246
AALP_AA5G071300arabis_alpinaKFK3387380.286770.6093pistacia_veracds-EVM0016752.18070.3571
AALP_AA5G071300arabis_alpinaKFK3387381.720469.8925juglans_regiacds.Jr05_11280_p181.428669.6429
AALP_AA5G071300arabis_alpinaKFK3387381.003670.9677juglans_regiacds.Jr05_12010_p180.714370.7143
AALP_AA5G071300arabis_alpinaKFK3387382.437368.8172juglans_regiacds.Jr14_16230_p182.142968.5714
AALP_AA5G071300arabis_alpinaKFK3387382.078868.8172juglans_regiacds.Jr14_16260_p181.785768.5714
AALP_AA5G071300arabis_alpinaKFK3387358.422946.2366saccharum_spontaneumSspon.05G0000340-1A-mRNA-1:cds52.750841.7476
AALP_AA5G071300arabis_alpinaKFK3387378.494668.4588nicotiana_attenuataOIS9696981.412671.0037
AALP_AA5G071300arabis_alpinaKFK3387359.498243.7276triticum_dicoccoidesTRIDC2AG079240.151.552837.8882
AALP_AA5G071300arabis_alpinaKFK3387360.215143.7276triticum_dicoccoidesTRIDC2BG087490.251.692337.5385
AALP_AA5G071300arabis_alpinaKFK3387379.928363.7993olea_europaeaOE9A098762C178.798662.8975
AALP_AA5G071300arabis_alpinaKFK3387380.645264.8745olea_europaeaOE9A077596C179.505363.9576
AALP_AA5G071300arabis_alpinaKFK3387380.286768.4588olea_europaeaOE9A115775AC479.432667.7305
AALP_AA5G071300arabis_alpinaKFK3387378.136264.8745olea_europaeaOE9A023470C178.985565.5797
AALP_AA5G071300arabis_alpinaKFK3387375.985758.0645musa_acuminataMa09_p30300.176.25958.2734
AALP_AA5G071300arabis_alpinaKFK3387369.53453.405musa_acuminataMa06_p20760.167.832252.0979
AALP_AA5G071300arabis_alpinaKFK3387375.268858.0645musa_acuminataMa06_p20750.17557.8571
AALP_AA5G071300arabis_alpinaKFK3387361.648745.5197eragrostis_tefEt_7B_055770.CDS138.826228.6682
AALP_AA5G071300arabis_alpinaKFK3387362.007245.1613eragrostis_tefEt_7A_052988.CDS152.743938.4146
AALP_AA5G071300arabis_alpinaKFK3387381.720469.8925actinidia_chinensisPSR8983780.851169.1489
AALP_AA5G071300arabis_alpinaKFK3387381.003670.2509actinidia_chinensisPSR9545479.858769.2579
AALP_AA5G071300arabis_alpinaKFK3387380.286768.1004actinidia_chinensisPSR8645978.873266.9014
AALP_AA5G071300arabis_alpinaKFK3387379.569970.6093quercus_subercds-POF07901.180.144471.1191
AALP_AA5G071300arabis_alpinaKFK3387386.738381.362camelina_sativaCsa04g023950.1.cds185.211379.9296
AALP_AA5G071300arabis_alpinaKFK3387386.021581.0036camelina_sativaCsa09g034080.146.87544.1406
AALP_AA5G071300arabis_alpinaKFK3387387.096880.6452camelina_sativaCsa06g016910.114.429913.361
AALP_AA5G071300arabis_alpinaKFK3387358.422944.4444hordeum_vulgareHORVU.MOREX.r3.2HG0213970.1.CDS150.153838.1538
AALP_AA5G071300arabis_alpinaKFK3387381.36267.7419daucus_carotaKZN0156481.36267.7419
AALP_AA5G071300arabis_alpinaKFK3387363.440948.0287leersia_perrieriLPERR04G25650.154.461541.2308
AALP_AA5G071300arabis_alpinaKFK3387361.648741.2186ostreococcus_lucimarinusABO9449762.318841.6667
AALP_AA5G071300arabis_alpinaKFK3387382.437370.6093theobroma_cacaoEOY3334382.142970.3571
AALP_AA5G071300arabis_alpinaKFK3387381.003669.534citrus_clementinaESR3737977.397366.4384
AALP_AA5G071300arabis_alpinaKFK3387370.967758.4229nymphaea_colorataNC1G0110190.1:cds70.967758.4229
AALP_AA5G071300arabis_alpinaKFK3387369.892555.1971nymphaea_colorataNC13G0026170.1:cds55.873944.1261
AALP_AA5G071300arabis_alpinaKFK3387362.72447.3118echinochloa_crusgalliscaffold421.5.cds56.270142.4437
AALP_AA5G071300arabis_alpinaKFK3387353.046639.7849echinochloa_crusgalliscaffold424.51.cds53.818240.3636
AALP_AA5G071300arabis_alpinaKFK3387355.91442.2939echinochloa_crusgalliscaffold19.2.cds55.123741.6961
AALP_AA5G071300arabis_alpinaKFK3387362.72446.9534echinochloa_crusgalliscaffold120.60.cds58.333343.6667
AALP_AA5G071300arabis_alpinaKFK3387389.605782.0788brassica_oleraceaBo3g120940.189.928182.3741
AALP_AA5G071300arabis_alpinaKFK3387375.985760.9319chenopodium_quinoaAUR62001534-RA:cds78.228862.7306
AALP_AA5G071300arabis_alpinaKFK3387375.627260.5735chenopodium_quinoaAUR62020248-RA:cds77.573562.1324
AALP_AA5G071300arabis_alpinaKFK3387361.648746.595panicum_halliiPUZ4959360.992946.0993
AALP_AA5G071300arabis_alpinaKFK3387382.795769.8925corchorus_capsularisOMO9629882.569.6429
AALP_AA5G071300arabis_alpinaKFK3387388.17281.7204arabidopsis_hallerig25480.t157.342753.1469
AALP_AA5G071300arabis_alpinaKFK3387388.17282.0788arabidopsis_lyratafgenesh2_kg.5__834__AT3G44260.187.857181.7857
AALP_AA5G071300arabis_alpinaKFK3387381.003669.534rosa_chinensisPRQ3251763.841854.8023
AALP_AA5G071300arabis_alpinaKFK3387355.91438.3513cyanidioschyzon_merolaeCMO135CT48.447233.2298
AALP_AA5G071300arabis_alpinaKFK3387379.928372.043corymbia_citriodoracds-KAF8039611.177.97270.2797
AALP_AA5G071300arabis_alpinaKFK3387376.702564.8745kalanchoe_fedtschenkoiKaladp0011s0869.1.v1.1.CDS.177.536265.5797
AALP_AA5G071300arabis_alpinaKFK3387378.136266.6667coffea_canephoraCDP0686475.694464.5833
AALP_AA5G071300arabis_alpinaKFK3387379.211563.7993vigna_radiataVradi0234s00040.176.736161.8056
AALP_AA5G071300arabis_alpinaKFK3387374.193664.8745vigna_radiataVradi02g07450.164.48656.3863
AALP_AA5G071300arabis_alpinaKFK3387362.007247.3118oryza_nivaraONIVA04G29390.152.583640.1216

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression