Description

Ensembl ID AALP_AA5G049500 Gene ID Accession -
Symbol Alias - Full Name hypothetical protein
Status Confidence Length 825 bases Strand Plus strand
Position 5 : 3257773 - 3258597 RNA binding domain Ribosomal_L12
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
KFK33704 Ribosomal_L12 PF00542 9.8e-25 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- KFK33704 825 191aa KFK33704

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
AALP_AA5G049500arabis_alpinaKFK2573898.952998.4293arabis_alpinaKFK3370498.952998.4293
AALP_AA5G049500arabis_alpinaKFK3653572.772355.9406arabis_alpinaKFK3370476.963359.1623

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
AALP_AA5G049500arabis_alpinaKFK3370474.345660.733ficus_caricaFCD_00001743-RA:cds73.575160.1036
AALP_AA5G049500arabis_alpinaKFK3370475.392764.3979cannabis_sativa_femalecds.evm.model.10.124874.226863.4021
AALP_AA5G049500arabis_alpinaKFK3370479.581267.0157citrullus_lanatusCla97C09G180520.179.581267.0157
AALP_AA5G049500arabis_alpinaKFK3370476.963364.3979beta_vulgarisKMS9883678.191565.4255
AALP_AA5G049500arabis_alpinaKFK3370472.251361.7801cucumis_meloMELO3C021553.2.162.727353.6364
AALP_AA5G049500arabis_alpinaKFK3370472.774959.6859cucumis_sativusKGN5138275.956362.2951
AALP_AA5G049500arabis_alpinaKFK3370474.345663.3508populus_trichocarpaPotri.001G346100.1.v4.175.935864.7059
AALP_AA5G049500arabis_alpinaKFK3370489.528883.7696arabidopsis_thalianaAT3G27850.191.443885.5615
AALP_AA5G049500arabis_alpinaKFK3370493.717388.4817arabidopsis_thalianaAT3G27830.293.717388.4817
AALP_AA5G049500arabis_alpinaKFK3370477.486967.0157malus_domestica_goldenCDS:MD09G0027700.178.723468.0851
AALP_AA5G049500arabis_alpinaKFK3370476.439865.9686malus_domestica_goldenCDS:MD17G0029200.177.659667.0213
AALP_AA5G049500arabis_alpinaKFK3370490.052484.8168brassica_napusCDY4443989.583384.375
AALP_AA5G049500arabis_alpinaKFK3370487.958183.7696brassica_napusCDX8646688.888984.6561
AALP_AA5G049500arabis_alpinaKFK3370488.481783.2461brassica_junceacds.BjuA06g07030S89.41884.127
AALP_AA5G049500arabis_alpinaKFK3370478.010567.0157prunus_dulcisVVA1773179.255368.0851
AALP_AA5G049500arabis_alpinaKFK3370478.010567.0157prunus_persicaONI1959679.255368.0851
AALP_AA5G049500arabis_alpinaKFK3370458.115247.644cajanus_cajanC.cajan_34916.t78.16964.0845
AALP_AA5G049500arabis_alpinaKFK3370476.439862.8272lupinus_angustifoliusOIW1239380.66366.2983
AALP_AA5G049500arabis_alpinaKFK3370476.439865.445lupinus_angustifoliusOIW0184877.659666.4894
AALP_AA5G049500arabis_alpinaKFK3370476.439864.9215lupinus_angustifoliusOIW0539178.074966.3102
AALP_AA5G049500arabis_alpinaKFK3370475.916261.7801glycine_maxKRH2416476.315862.1053
AALP_AA5G049500arabis_alpinaKFK3370475.392762.3037glycine_maxKRH2912761.802651.073
AALP_AA5G049500arabis_alpinaKFK3370473.82262.8272medicago_truncatulaKEH2480777.900666.2983
AALP_AA5G049500arabis_alpinaKFK3370474.869163.3508vigna_angularisKOM5107876.470664.7059
AALP_AA5G049500arabis_alpinaKFK3370474.345661.2565pisum_sativumPsat1g056240.1.cds177.173963.587
AALP_AA5G049500arabis_alpinaKFK3370474.345661.2565phaseolus_vulgarisESW0360261.471950.6493
AALP_AA5G049500arabis_alpinaKFK3370479.057669.1099manihot_esculentaOAY3747880.748770.5882
AALP_AA5G049500arabis_alpinaKFK3370476.963369.1099manihot_esculentaOAY5217272.058864.7059
AALP_AA5G049500arabis_alpinaKFK3370474.345660.2094solanum_lycopersicumSolyc02g086730.2.148.965539.6552
AALP_AA5G049500arabis_alpinaKFK3370475.392761.2565solanum_tuberosumPGSC0003DMT40000128275.789561.5789
AALP_AA5G049500arabis_alpinaKFK3370475.392762.3037solanum_tuberosumPGSC0003DMT40000128375.789562.6316
AALP_AA5G049500arabis_alpinaKFK3370439.790634.555capsicum_annuumPHT9174283.516572.5275
AALP_AA5G049500arabis_alpinaKFK3370472.251357.5916sesamum_indicumSIN_1007900.t.cds153.696542.8016
AALP_AA5G049500arabis_alpinaKFK3370472.774958.1152sesamum_indicumSIN_1004063.t.cds173.157958.4211
AALP_AA5G049500arabis_alpinaKFK3370469.633552.8796helianthus_annuusmRNA:HanXRQr2_Chr07g030733158.333344.2982
AALP_AA5G049500arabis_alpinaKFK3370474.869159.1623helianthus_annuusCDS:HanXRQr2_Chr14g0654251.176.470660.4278
AALP_AA5G049500arabis_alpinaKFK3370473.298458.1152helianthus_annuusCDS:HanXRQr2_Chr14g0654221.174.468159.0426
AALP_AA5G049500arabis_alpinaKFK3370459.685947.1204lactuca_sativacds-PLY81673.157.575845.4545
AALP_AA5G049500arabis_alpinaKFK3370474.345659.1623lactuca_sativacds-PLY63983.174.345659.1623
AALP_AA5G049500arabis_alpinaKFK3370476.439861.2565lactuca_sativacds-PLY77754.177.248761.9048
AALP_AA5G049500arabis_alpinaKFK3370461.780153.9267avena_sativa_sangAVESA.00010b.r2.3DG0542150.1.CDS.156.190549.0476
AALP_AA5G049500arabis_alpinaKFK3370460.73350.2618avena_sativa_sangAVESA.00010b.r2.1AG0003650.1.CDS.166.285754.8571
AALP_AA5G049500arabis_alpinaKFK3370461.256553.4031avena_sativa_sangAVESA.00010b.r2.3CG0494980.1.CDS.167.241458.6207
AALP_AA5G049500arabis_alpinaKFK3370461.780153.9267avena_sativa_sangAVESA.00010b.r2.3AG0441830.1.CDS.152.678645.9821
AALP_AA5G049500arabis_alpinaKFK3370461.256553.4031avena_sativa_ot3098cds.AVESA.00001b.r3.3Cg0002007.155.450248.3412
AALP_AA5G049500arabis_alpinaKFK3370461.780153.9267avena_sativa_ot3098cds.AVESA.00001b.r3.3Dg0001321.15951.5
AALP_AA5G049500arabis_alpinaKFK3370461.780153.9267avena_sativa_ot3098cds.AVESA.00001b.r3.3Ag0001778.156.190549.0476
AALP_AA5G049500arabis_alpinaKFK3370454.450346.0733lolium_perennecds.KYUSt_chr1.4069871.232960.274
AALP_AA5G049500arabis_alpinaKFK3370463.350854.4503lolium_perennecds.KYUSt_chr3.2600056.279148.3721
AALP_AA5G049500arabis_alpinaKFK3370459.685949.7382oryza_brachyanthaOB05G33730.164.406853.6723
AALP_AA5G049500arabis_alpinaKFK3370442.408436.1257oryza_brachyanthaOB01G34680.125.961522.1154
AALP_AA5G049500arabis_alpinaKFK3370460.209449.2147oryza_rufipogonORUFI05G28090.164.245852.514
AALP_AA5G049500arabis_alpinaKFK3370463.874351.8325oryza_rufipogonORUFI01G28340.165.945953.5135
AALP_AA5G049500arabis_alpinaKFK3370458.638749.2147oryza_punctataOPUNC05G23790.165.116354.6512
AALP_AA5G049500arabis_alpinaKFK3370458.115247.644oryza_glaberrimaORGLA05G0226900.162.011250.838
AALP_AA5G049500arabis_alpinaKFK3370447.64438.7435oryza_glaberrimaORGLA01G0208000.150.276240.884
AALP_AA5G049500arabis_alpinaKFK3370461.256551.3089sorghum_bicolorEES0120964.640954.1436
AALP_AA5G049500arabis_alpinaKFK3370462.827253.4031secale_cerealeSECCE3Rv1G0183190.1.CDS.168.181857.9545
AALP_AA5G049500arabis_alpinaKFK3370461.256550.2618secale_cerealeSECCE1Rv1G0058710.1.CDS.165.363153.6313
AALP_AA5G049500arabis_alpinaKFK3370460.209449.2147setaria_viridisTKW2581664.245852.514
AALP_AA5G049500arabis_alpinaKFK3370463.350851.8325setaria_viridisTKW1580466.850854.6961
AALP_AA5G049500arabis_alpinaKFK3370463.350851.8325setaria_italicaKQL0619866.850854.6961
AALP_AA5G049500arabis_alpinaKFK3370460.209449.2147setaria_italicaKQL1426046.37137.9032
AALP_AA5G049500arabis_alpinaKFK3370461.256550.2618zea_maysZm00001eb359610_P00163.934452.459
AALP_AA5G049500arabis_alpinaKFK3370461.780151.8325zea_maysZm00001eb157660_P00164.480954.0984
AALP_AA5G049500arabis_alpinaKFK3370462.303750.2618triticum_aestivumTraesCS1A02G406500.1.cds167.231654.2373
AALP_AA5G049500arabis_alpinaKFK3370461.256549.7382triticum_aestivumTraesCS1B02G436700.1.cds16552.7778
AALP_AA5G049500arabis_alpinaKFK3370463.874353.9267triticum_aestivumTraesCS3D02G240800.1.cds169.318258.5227
AALP_AA5G049500arabis_alpinaKFK3370463.350853.4031triticum_aestivumTraesCS3B02G268900.1.cds168.7557.9545
AALP_AA5G049500arabis_alpinaKFK3370462.303750.2618triticum_aestivumTraesCS1D02G414900.1.cds166.480453.6313
AALP_AA5G049500arabis_alpinaKFK3370455.497446.0733ananas_comosusAco006185.1.mrna172.602760.274
AALP_AA5G049500arabis_alpinaKFK3370458.638748.6911amborella_trichopodaERN1532873.684261.1842
AALP_AA5G049500arabis_alpinaKFK3370449.738239.267amborella_trichopodaERN0449553.370842.1348
AALP_AA5G049500arabis_alpinaKFK3370462.303750.2618triticum_turgidumTRITD1Av1G208120.167.231654.2373
AALP_AA5G049500arabis_alpinaKFK3370461.256549.7382triticum_turgidumTRITD1Bv1G216430.16552.7778
AALP_AA5G049500arabis_alpinaKFK3370463.350852.8796brachypodium_distachyonKQK0904968.7557.3864
AALP_AA5G049500arabis_alpinaKFK3370475.392761.7801gossypium_raimondiiKJB2179878.260964.1304
AALP_AA5G049500arabis_alpinaKFK3370475.916260.2094gossypium_raimondiiKJB7584765.909152.2727
AALP_AA5G049500arabis_alpinaKFK3370481.675467.0157gossypium_raimondiiKJB1149982.539767.7249
AALP_AA5G049500arabis_alpinaKFK3370474.869166.4921corylus_avellanaCav05g23320.t1.cds176.063867.5532
AALP_AA5G049500arabis_alpinaKFK3370462.827252.8796triticum_urartuTuG1812G0300002842.01.T01.cds34614668.181857.3864
AALP_AA5G049500arabis_alpinaKFK3370475.392763.8743vitis_viniferaVitvi14g01754_P00178.260966.3043
AALP_AA5G049500arabis_alpinaKFK3370457.591644.5026eragrostis_curvulaTVU3565364.327549.7076
AALP_AA5G049500arabis_alpinaKFK3370457.591646.0733eragrostis_curvulaTVU2027452.631642.1053
AALP_AA5G049500arabis_alpinaKFK3370476.439860.733ipomoea_trilobaitb05g25490.t176.439860.733
AALP_AA5G049500arabis_alpinaKFK3370463.874351.8325oryza_sativaOs01t0662300-0265.945953.5135
AALP_AA5G049500arabis_alpinaKFK3370460.209449.2147oryza_sativaOs05t0568300-0064.245852.514
AALP_AA5G049500arabis_alpinaKFK3370458.638748.1675oryza_meridionalisOMERI03G30270.161.878550.8287
AALP_AA5G049500arabis_alpinaKFK3370464.921552.356oryza_meridionalisOMERI01G23140.144.128135.5872
AALP_AA5G049500arabis_alpinaKFK3370476.439863.8743fraxinus_excelsiorFRAEX38873_v2_000103340.1.cds162.393252.1368
AALP_AA5G049500arabis_alpinaKFK3370459.685948.6911oryza_indicaBGIOSGA017542-PA63.687151.9553
AALP_AA5G049500arabis_alpinaKFK3370463.874351.8325oryza_glumipatulaOGLUM01G29300.165.945953.5135
AALP_AA5G049500arabis_alpinaKFK3370460.209449.2147oryza_glumipatulaOGLUM05G27810.164.245852.514
AALP_AA5G049500arabis_alpinaKFK3370431.937228.2723oryza_barthiiOBART05G26190.171.764763.5294
AALP_AA5G049500arabis_alpinaKFK3370472.251356.5445cynara_cardunculusKVH9287871.87556.25
AALP_AA5G049500arabis_alpinaKFK3370476.439862.3037cynara_cardunculusKVI0916176.842162.6316
AALP_AA5G049500arabis_alpinaKFK3370464.397953.4031dioscorea_rotundataDRNTG_34281.1.cds167.582456.044
AALP_AA5G049500arabis_alpinaKFK3370491.62383.7696eutrema_salsugineumESQ3268492.105384.2105
AALP_AA5G049500arabis_alpinaKFK3370470.157162.8272quercus_lobataQL02p075946:mrna:CDS:174.033166.2983
AALP_AA5G049500arabis_alpinaKFK3370464.397955.4974quercus_lobataQL02p075960:mrna59.708751.4563
AALP_AA5G049500arabis_alpinaKFK3370463.874353.9267aegilops_tauschiiAET3Gv20586300.265.945955.6757
AALP_AA5G049500arabis_alpinaKFK3370461.256549.2147aegilops_tauschiiAET1Gv20971500.151.541941.4097
AALP_AA5G049500arabis_alpinaKFK3370475.916265.445pistacia_veracds-EVM0017143.176.315865.7895
AALP_AA5G049500arabis_alpinaKFK3370475.392767.5393juglans_regiacds.Jr01_04530_p169.230862.0192
AALP_AA5G049500arabis_alpinaKFK3370474.869166.4921juglans_regiacds.Jr10_03340_p176.063867.5532
AALP_AA5G049500arabis_alpinaKFK3370474.869166.4921juglans_regiacds.Jr10_03330_p176.063867.5532
AALP_AA5G049500arabis_alpinaKFK3370463.350852.356saccharum_spontaneumSspon.03G0009710-2B-mRNA-1:cds62.694351.8135
AALP_AA5G049500arabis_alpinaKFK3370476.439862.8272nicotiana_attenuataOIS9896277.659663.8298
AALP_AA5G049500arabis_alpinaKFK3370472.774961.7801nicotiana_attenuataOIS9876374.731263.4409
AALP_AA5G049500arabis_alpinaKFK3370463.350853.4031triticum_dicoccoidesTRIDC3BG040330.168.7557.9545
AALP_AA5G049500arabis_alpinaKFK3370461.256549.7382triticum_dicoccoidesTRIDC1BG068890.16552.7778
AALP_AA5G049500arabis_alpinaKFK3370462.303750.2618triticum_dicoccoidesTRIDC1AG059920.158.620747.2906
AALP_AA5G049500arabis_alpinaKFK3370463.350853.4031triticum_dicoccoidesTRIDC3AG035980.257.61948.5714
AALP_AA5G049500arabis_alpinaKFK3370476.439863.8743olea_europaeaOE9A066494C176.439863.8743
AALP_AA5G049500arabis_alpinaKFK3370476.963363.3508olea_europaeaOE9A111646C176.165862.6943
AALP_AA5G049500arabis_alpinaKFK3370476.963363.8743olea_europaeaOE9A044618C176.165863.2124
AALP_AA5G049500arabis_alpinaKFK3370451.308938.2199selaginella_moellendorffiiEFJ3486280.327959.8361
AALP_AA5G049500arabis_alpinaKFK3370451.308938.2199selaginella_moellendorffiiEFJ0577480.327959.8361
AALP_AA5G049500arabis_alpinaKFK3370467.015752.8796musa_acuminataMa09_p06740.169.565254.8913
AALP_AA5G049500arabis_alpinaKFK3370468.586454.4503musa_acuminataMa02_p10840.171.195756.5217
AALP_AA5G049500arabis_alpinaKFK3370426.17819.8953musa_acuminataMa01_p07460.183.333363.3333
AALP_AA5G049500arabis_alpinaKFK3370463.874350.7853eragrostis_tefEt_3A_023353.CDS168.156454.1899
AALP_AA5G049500arabis_alpinaKFK3370462.827249.2147eragrostis_tefEt_9B_065992.CDS167.796653.1073
AALP_AA5G049500arabis_alpinaKFK3370463.350850.7853eragrostis_tefEt_3B_027824.CDS167.597854.1899
AALP_AA5G049500arabis_alpinaKFK3370473.298459.6859actinidia_chinensisPSS3522774.866360.9626
AALP_AA5G049500arabis_alpinaKFK3370469.633562.3037quercus_subercds-POE95668.173.480765.7459
AALP_AA5G049500arabis_alpinaKFK3370469.633562.3037quercus_subercds-POE85012.173.480765.7459
AALP_AA5G049500arabis_alpinaKFK3370443.455537.1728quercus_subercds-POE61570.173.451362.8319
AALP_AA5G049500arabis_alpinaKFK3370494.240887.9581camelina_sativaCsa09g015970.1.cds194.240887.9581
AALP_AA5G049500arabis_alpinaKFK3370493.717387.4346camelina_sativaCsa06g008920.1.cds193.717387.4346
AALP_AA5G049500arabis_alpinaKFK3370490.575984.2932camelina_sativaCsa06g008960.1.cds192.513486.0963
AALP_AA5G049500arabis_alpinaKFK3370490.575984.2932camelina_sativaCsa06g008940.1.cds192.513486.0963
AALP_AA5G049500arabis_alpinaKFK3370491.099583.2461camelina_sativaCsa04g015920.1.cds193.048185.0267
AALP_AA5G049500arabis_alpinaKFK3370477.486961.7801daucus_carotaKZM9094178.723462.766
AALP_AA5G049500arabis_alpinaKFK3370472.774957.5916daucus_carotaKZM9758575.135159.4595
AALP_AA5G049500arabis_alpinaKFK3370479.581264.3979theobroma_cacaoEOY0241879.166764.0625
AALP_AA5G049500arabis_alpinaKFK3370473.298460.2094citrus_clementinaESR5976274.468161.1702
AALP_AA5G049500arabis_alpinaKFK3370465.968653.4031nymphaea_colorataNC11G0124120.1:cds66.666753.9683
AALP_AA5G049500arabis_alpinaKFK3370465.44551.8325nymphaea_colorataNC2G0009040.1:cds66.489452.6596
AALP_AA5G049500arabis_alpinaKFK3370462.827250.7853echinochloa_crusgalliscaffold18.818.cds67.039154.1899
AALP_AA5G049500arabis_alpinaKFK3370462.827251.3089echinochloa_crusgalliscaffold214.146.cds67.039154.7486
AALP_AA5G049500arabis_alpinaKFK3370490.575985.3403brassica_oleraceaBo7g090850.190.104284.8958
AALP_AA5G049500arabis_alpinaKFK3370457.591644.5026chenopodium_quinoaAUR62019712-RA:cds36.423828.1457
AALP_AA5G049500arabis_alpinaKFK3370460.209441.3613physcomitrium_patensPAC:32983914.CDS.160.846641.7989
AALP_AA5G049500arabis_alpinaKFK3370464.921546.0733physcomitrium_patensPAC:32917371.CDS.151.666736.6667
AALP_AA5G049500arabis_alpinaKFK3370459.685943.4555physcomitrium_patensPAC:32953553.CDS.16043.6842
AALP_AA5G049500arabis_alpinaKFK3370460.209443.4555physcomitrium_patensPAC:32980380.CDS.160.526343.6842
AALP_AA5G049500arabis_alpinaKFK3370463.350845.5497physcomitrium_patensPAC:32920317.CDS.164.021246.0317
AALP_AA5G049500arabis_alpinaKFK3370461.256550.2618panicum_halliiPUZ6473765.363153.6313
AALP_AA5G049500arabis_alpinaKFK3370462.303750.7853panicum_halliiPUZ5549465.027353.0055
AALP_AA5G049500arabis_alpinaKFK3370455.497448.1675trifolium_pratenseTp57577_TGAC_v2_mRNA2830986.178974.7967
AALP_AA5G049500arabis_alpinaKFK3370480.628368.0628corchorus_capsularisOMO5917480.208367.7083
AALP_AA5G049500arabis_alpinaKFK3370489.528882.199arabidopsis_hallerig31777.t1.cds191.935584.4086
AALP_AA5G049500arabis_alpinaKFK3370494.764489.0052arabidopsis_hallerig18960.t1.cds194.764489.0052
AALP_AA5G049500arabis_alpinaKFK3370459.685948.6911digitaria_exilisDexi3A01G0016130.1:cds62.637451.0989
AALP_AA5G049500arabis_alpinaKFK3370490.052482.7225arabidopsis_lyratafgenesh2_kg.5__567__AT3G27850.192.473184.9462
AALP_AA5G049500arabis_alpinaKFK3370490.575985.3403arabidopsis_lyratafgenesh2_kg.5__564__AT3G27830.194.535589.071
AALP_AA5G049500arabis_alpinaKFK3370477.486967.5393rosa_chinensisPRQ5395778.723468.617
AALP_AA5G049500arabis_alpinaKFK3370470.680662.3037corymbia_citriodoracds-KAF8010972.169.587661.3402
AALP_AA5G049500arabis_alpinaKFK3370473.82262.8272corymbia_citriodoracds-KAF8037563.174.210563.1579
AALP_AA5G049500arabis_alpinaKFK3370473.298457.0681kalanchoe_fedtschenkoiKaladp0040s0407.1.v1.1.CDS.176.502759.5628
AALP_AA5G049500arabis_alpinaKFK3370431.413626.178kalanchoe_fedtschenkoiKaladp0671s0012.1.v1.1.CDS.192.307776.9231
AALP_AA5G049500arabis_alpinaKFK3370470.157157.5916coffea_canephoraCDP0209969.430156.9948
AALP_AA5G049500arabis_alpinaKFK3370473.298461.2565vigna_radiataVradi02g02230.169.306957.9208
AALP_AA5G049500arabis_alpinaKFK3370460.209449.2147oryza_nivaraONIVA05G28110.164.245852.514
AALP_AA5G049500arabis_alpinaKFK3370464.397952.356oryza_nivaraONIVA01G28720.166.486554.0541

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression