Description

Ensembl ID AALP_AA4G002500 Gene ID Accession -
Symbol Alias - Full Name hypothetical protein
Status Confidence Length 1860 bases Strand Minus strand
Position 4 : 308789 - 310648 RNA binding domain Methyltransf_31 , Met_10 , MTS
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
KFK35529 Methyltransf_31 PF13847 1e-09 1
KFK35529 Met_10 PF02475 7.7e-06 2
KFK35529 MTS PF05175 3.7e-06 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- KFK35529 1456 444aa KFK35529

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
AALP_AA4G002500arabis_alpinaKFK3229517.28558.4507arabis_alpinaKFK3552930.405414.8649
AALP_AA4G002500arabis_alpinaKFK3363822.330111.068arabis_alpinaKFK3552925.900912.8378
AALP_AA4G002500arabis_alpinaKFK3944020.550511.9266arabis_alpinaKFK3552925.225214.6396

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
AALP_AA4G002500arabis_alpinaKFK3552958.558640.7658chondrus_crispusCDF4066748.780533.9587
AALP_AA4G002500arabis_alpinaKFK3552965.090149.0991chlamydomonas_reinhardtiiPNW7132242.189831.8248
AALP_AA4G002500arabis_alpinaKFK3552983.558668.018papaver_somniferumRZC4823077.941263.4454
AALP_AA4G002500arabis_alpinaKFK3552976.126162.6126papaver_somniferumRZC4718179.342765.2582
AALP_AA4G002500arabis_alpinaKFK3552969.819854.2793marchantia_polymorphaPTQ4585964.718250.3132
AALP_AA4G002500arabis_alpinaKFK3552982.207271.1712ficus_caricaFCD_00018674-RA:cds82.392871.3318
AALP_AA4G002500arabis_alpinaKFK3552983.333372.5225cannabis_sativa_femalecds.evm.model.09.157482.405371.7149
AALP_AA4G002500arabis_alpinaKFK3552983.333373.1982citrullus_lanatusCla97C02G044650.184.282574.0319
AALP_AA4G002500arabis_alpinaKFK3552982.432469.5946beta_vulgarisKMS9911682.993270.068
AALP_AA4G002500arabis_alpinaKFK3552967.342358.1081cucumis_meloMELO3C019630.2.183.286971.8663
AALP_AA4G002500arabis_alpinaKFK3552976.351365.991cucumis_sativusKGN4679387.596975.7106
AALP_AA4G002500arabis_alpinaKFK3552984.909972.0721populus_trichocarpaPotri.010G173800.1.v4.185.101672.2348
AALP_AA4G002500arabis_alpinaKFK3552994.594691.6667arabidopsis_thalianaAT1G54310.292.51189.6476
AALP_AA4G002500arabis_alpinaKFK3552985.360472.5225malus_domestica_goldenmRNA:MD10G018220085.94173.0159
AALP_AA4G002500arabis_alpinaKFK3552991.216287.6126brassica_napusCDY3738890.401886.8304
AALP_AA4G002500arabis_alpinaKFK3552990.765887.6126brassica_napusCDY1062090.561887.4157
AALP_AA4G002500arabis_alpinaKFK3552991.891988.0631brassica_junceacds.BjuB06g34660S90.265586.5044
AALP_AA4G002500arabis_alpinaKFK3552990.765887.6126brassica_junceacds.BjuA05g23020S90.561887.4157
AALP_AA4G002500arabis_alpinaKFK3552984.909972.2973prunus_dulcisVVA2695585.87773.1207
AALP_AA4G002500arabis_alpinaKFK3552984.909972.2973prunus_persicaONI1182885.87773.1207
AALP_AA4G002500arabis_alpinaKFK3552983.108169.3694cajanus_cajanC.cajan_02193.t83.863670
AALP_AA4G002500arabis_alpinaKFK3552983.333371.3964lupinus_angustifoliusOIW0809882.959671.0762
AALP_AA4G002500arabis_alpinaKFK3552982.657768.2432glycine_maxKRH4484182.657768.2432
AALP_AA4G002500arabis_alpinaKFK3552969.369457.6577vigna_angularisKOM2702081.914968.0851
AALP_AA4G002500arabis_alpinaKFK3552984.00970.9459pisum_sativumPsat4g170560.1.cds81.08768.4783
AALP_AA4G002500arabis_alpinaKFK3552983.333370.7207phaseolus_vulgarisESW0543684.090971.3636
AALP_AA4G002500arabis_alpinaKFK3552982.432469.5946vigna_unguiculataVigun11g035900.1.v1.283.371370.3872
AALP_AA4G002500arabis_alpinaKFK3552984.00971.3964manihot_esculentaOAY2644383.820271.236
AALP_AA4G002500arabis_alpinaKFK3552971.621660.3604capsicum_annuumPHT7751480.30367.6768
AALP_AA4G002500arabis_alpinaKFK3552980.180267.7928helianthus_annuusmRNA:HanXRQr2_Chr03g012019181.464568.8787
AALP_AA4G002500arabis_alpinaKFK3552980.180268.018lactuca_sativacds-PLY84452.181.278568.9498
AALP_AA4G002500arabis_alpinaKFK3552979.729763.964avena_sativa_sangAVESA.00010b.r2.6CG1111050.1.CDS80.637864.6925
AALP_AA4G002500arabis_alpinaKFK3552982.432464.8649avena_sativa_sangAVESA.00010b.r2.2DG0382880.1.CDS79.392662.4729
AALP_AA4G002500arabis_alpinaKFK3552981.756864.4144avena_sativa_sangAVESA.00010b.r2.6AG1006710.1.CDS78.741962.039
AALP_AA4G002500arabis_alpinaKFK3552981.98264.6396avena_sativa_ot3098cds.AVESA.00001b.r3.6Ag0000111.177.282460.9342
AALP_AA4G002500arabis_alpinaKFK3552982.432464.8649avena_sativa_ot3098cds.AVESA.00001b.r3.2Dg0001021.277.872361.2766
AALP_AA4G002500arabis_alpinaKFK3552964.864951.1261lolium_perennecds.KYUSt_chr6.2533772.544157.1788
AALP_AA4G002500arabis_alpinaKFK3552982.207265.0901oryza_brachyanthaOB02G14800.179.520762.963
AALP_AA4G002500arabis_alpinaKFK3552981.306364.8649oryza_rufipogonORUFI02G05710.170.923456.5815
AALP_AA4G002500arabis_alpinaKFK3552980.630665.0901oryza_punctataOPUNC02G04740.178.681363.5165
AALP_AA4G002500arabis_alpinaKFK3552981.756865.5405sorghum_bicolorEES0460878.91363.2609
AALP_AA4G002500arabis_alpinaKFK3552980.855964.6396secale_cerealeSECCE6Rv1G0387050.179.777863.7778
AALP_AA4G002500arabis_alpinaKFK3552981.756865.991setaria_viridisTKW3775579.257663.9738
AALP_AA4G002500arabis_alpinaKFK3552965.99152.9279setaria_italicaKQL2852575.906760.8808
AALP_AA4G002500arabis_alpinaKFK3552981.98265.3153zea_maysZm00001eb233280_P00379.130463.0435
AALP_AA4G002500arabis_alpinaKFK3552981.306364.1892triticum_aestivumTraesCS6B02G183900.180.044363.1929
AALP_AA4G002500arabis_alpinaKFK3552979.279363.5135triticum_aestivumTraesCS6A02G155700.281.670565.4292
AALP_AA4G002500arabis_alpinaKFK3552973.648757.6577triticum_aestivumTraesCS6D02G145700.276.941260.2353
AALP_AA4G002500arabis_alpinaKFK3552979.054164.4144ananas_comosusAco008336.1.mrna179.411864.7059
AALP_AA4G002500arabis_alpinaKFK3552978.603665.5405amborella_trichopodaERN1494978.076165.1007
AALP_AA4G002500arabis_alpinaKFK3552981.306364.4144triticum_turgidumTRITD6Bv1G068610.180.400963.6971
AALP_AA4G002500arabis_alpinaKFK3552973.198257.8829triticum_turgidumTRITD6Av1G059840.177.38161.1905
AALP_AA4G002500arabis_alpinaKFK3552979.279363.2883brachypodium_distachyonPNT6599181.293364.8961
AALP_AA4G002500arabis_alpinaKFK3552984.909972.5225gossypium_raimondiiKJB0789683.777871.5556
AALP_AA4G002500arabis_alpinaKFK3552958.558649.0991corylus_avellanaCav03g07280.t183.87170.3226
AALP_AA4G002500arabis_alpinaKFK3552981.306364.6396triticum_urartuTuG1812G0600001631.01.T0280.222263.7778
AALP_AA4G002500arabis_alpinaKFK3552983.558671.6216vitis_viniferaVitvi19g01737_P00185.091772.9358
AALP_AA4G002500arabis_alpinaKFK3552980.630665.7658eragrostis_curvulaTVU3278277.995663.6166
AALP_AA4G002500arabis_alpinaKFK3552982.207268.018ipomoea_trilobaitb05g28140.t181.655567.5615
AALP_AA4G002500arabis_alpinaKFK3552969.144156.0811oryza_sativaOs02t0173700-0183.651267.8474
AALP_AA4G002500arabis_alpinaKFK3552981.306365.3153oryza_meridionalisOMERI02G06370.178.138562.7706
AALP_AA4G002500arabis_alpinaKFK3552977.02763.964fraxinus_excelsiorFRAEX38873_v2_000113530.2.cds82.409668.4337
AALP_AA4G002500arabis_alpinaKFK3552981.081164.8649oryza_indicaBGIOSGA007640-PA77.586262.069
AALP_AA4G002500arabis_alpinaKFK3552981.306365.0901oryza_glumipatulaOGLUM02G05480.177.801762.2845
AALP_AA4G002500arabis_alpinaKFK3552981.306365.3153oryza_barthiiOBART02G05570.177.969862.635
AALP_AA4G002500arabis_alpinaKFK3552976.576661.4865dioscorea_rotundataDRNTG_21506.176.923161.7647
AALP_AA4G002500arabis_alpinaKFK3552993.243290.991eutrema_salsugineumESQ2984392.825190.583
AALP_AA4G002500arabis_alpinaKFK355297562.8378prunus_aviumPav_sc0001936.1_g040.1.mk:mrna83.458669.9248
AALP_AA4G002500arabis_alpinaKFK3552984.909971.8468quercus_lobataQL04p093744:mrna80.555668.1624
AALP_AA4G002500arabis_alpinaKFK3552991.441488.5135brassica_rapa_ro18A05p035790.1_BraROA.190.62587.7232
AALP_AA4G002500arabis_alpinaKFK3552981.531564.4144aegilops_tauschiiAET6Gv20397600.178.185761.7711
AALP_AA4G002500arabis_alpinaKFK3552983.108168.9189eucalyptus_grandisKCW5001384.054769.7039
AALP_AA4G002500arabis_alpinaKFK3552984.459572.5225pistacia_veracds-EVM0024980.185.227373.1818
AALP_AA4G002500arabis_alpinaKFK3552980.630667.7928juglans_regiacds.Jr02_07570_p177.826165.4348
AALP_AA4G002500arabis_alpinaKFK3552981.98269.5946juglans_regiacds.Jr02_07580_p182.16769.7517
AALP_AA4G002500arabis_alpinaKFK3552968.01856.5315saccharum_spontaneumSspon.04G0017270-2B-mRNA-1:cds87.031772.3343
AALP_AA4G002500arabis_alpinaKFK3552982.432469.1441nicotiana_attenuataOIS9677383.371369.9317
AALP_AA4G002500arabis_alpinaKFK3552981.531564.8649triticum_dicoccoidesTRIDC6AG021820.678.35562.3377
AALP_AA4G002500arabis_alpinaKFK3552980.630664.6396triticum_dicoccoidesTRIDC6BG027510.677.321861.987
AALP_AA4G002500arabis_alpinaKFK3552982.657768.6937olea_europaeaOE9A069612C382.844268.8488
AALP_AA4G002500arabis_alpinaKFK3552970.720753.3784selaginella_moellendorffiiEFJ2530775.299856.8345
AALP_AA4G002500arabis_alpinaKFK3552970.945953.8288selaginella_moellendorffiiEFJ2333075.539657.3141
AALP_AA4G002500arabis_alpinaKFK3552981.98265.7658musa_acuminataMa11_p16740.18064.1758
AALP_AA4G002500arabis_alpinaKFK3552979.279364.8649eragrostis_tefEt_1B_012200.CDS69.70357.0297
AALP_AA4G002500arabis_alpinaKFK3552980.630664.8649eragrostis_tefEt_1A_007405.CDS74.895460.251
AALP_AA4G002500arabis_alpinaKFK3552984.00969.5946actinidia_chinensisPSR9259183.258968.9732
AALP_AA4G002500arabis_alpinaKFK3552984.909971.6216quercus_subercds-POF06688.161.601351.9608
AALP_AA4G002500arabis_alpinaKFK3552994.144191.4414camelina_sativaCsa17g097060.192.070589.4273
AALP_AA4G002500arabis_alpinaKFK3552991.891988.7387camelina_sativaCsa14g069100.184.123781.2371
AALP_AA4G002500arabis_alpinaKFK3552994.819891.6667camelina_sativaCsa03g062900.191.323288.2863
AALP_AA4G002500arabis_alpinaKFK3552981.531565.0901hordeum_vulgareHORVU.MOREX.r3.6HG0570950.179.735763.6564
AALP_AA4G002500arabis_alpinaKFK3552967.117156.5315daucus_carotaKZN0090475.634563.7056
AALP_AA4G002500arabis_alpinaKFK3552981.306364.1892leersia_perrieriLPERR02G04830.178.478361.9565
AALP_AA4G002500arabis_alpinaKFK3552960.585641.4414ostreococcus_lucimarinusABP0044554.563937.3225
AALP_AA4G002500arabis_alpinaKFK3552985.810872.7477theobroma_cacaoEOY1426880.549768.2875
AALP_AA4G002500arabis_alpinaKFK3552984.459570.4955citrus_clementinaESR3553084.650170.6546
AALP_AA4G002500arabis_alpinaKFK3552978.153262.1622nymphaea_colorataNC11G0120600.1:cds70.528556.0976
AALP_AA4G002500arabis_alpinaKFK3552980.855965.3153echinochloa_crusgalliscaffold393.49.cds78.384363.3188
AALP_AA4G002500arabis_alpinaKFK3552981.081165.3153echinochloa_crusgalliscaffold183.236.cds78.602663.3188
AALP_AA4G002500arabis_alpinaKFK3552991.441487.8378brassica_oleraceaBo5g098250.190.62587.0536
AALP_AA4G002500arabis_alpinaKFK3552962.162253.1532chenopodium_quinoaAUR62037650-RA:cds80.466568.8047
AALP_AA4G002500arabis_alpinaKFK3552972.297355.1802physcomitrium_patensPp3c22_13410V3.367.014651.1482
AALP_AA4G002500arabis_alpinaKFK3552981.306365.0901panicum_halliiPUZ7429378.478362.8261
AALP_AA4G002500arabis_alpinaKFK3552982.657770.2703trifolium_pratenseTp57577_TGAC_v2_mRNA971984.562271.8894
AALP_AA4G002500arabis_alpinaKFK355297564.8649corchorus_capsularisOMP0016883.458672.1805
AALP_AA4G002500arabis_alpinaKFK3552993.243290.3153arabidopsis_hallerig24621.t194.736891.762
AALP_AA4G002500arabis_alpinaKFK3552969.594656.0811digitaria_exilisDexi1B01G0005590.1:cds76.296361.4815
AALP_AA4G002500arabis_alpinaKFK3552992.792890.0901arabidopsis_lyratascaffold_105445.194.279291.5332
AALP_AA4G002500arabis_alpinaKFK3552984.459571.6216rosa_chinensisPRQ3033085.03472.1088
AALP_AA4G002500arabis_alpinaKFK3552957.207238.7387cyanidioschyzon_merolaeCMM194CT41.166927.8768
AALP_AA4G002500arabis_alpinaKFK3552983.783869.3694corymbia_citriodoracds-KAF8006701.184.73870.1595
AALP_AA4G002500arabis_alpinaKFK3552976.351362.6126coffea_canephoraCDP1355777.93163.908
AALP_AA4G002500arabis_alpinaKFK3552949.774841.8919vigna_radiataVradi01g12720.185.658972.093
AALP_AA4G002500arabis_alpinaKFK3552981.306365.0901oryza_nivaraONIVA02G05920.174.279859.465

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression