Description

Ensembl ID AALP_AA3G245100 Gene ID Accession -
Symbol Alias - Full Name hypothetical protein
Status Confidence Length 2875 bases Strand Minus strand
Position 3 : 15549103 - 15551977 RNA binding domain Methyltransf_31 , Met_10 , Methyltransf_15 , tRNA_U5-meth_tr , MTS
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
KFK39440 Methyltransf_31 PF13847 3e-12 1
KFK39440 Met_10 PF02475 5e-05 2
KFK39440 Methyltransf_15 PF09445 8.2e-07 3
KFK39440 tRNA_U5-meth_tr PF05958 1.6e-18 4
KFK39440 MTS PF05175 7.3e-07 5

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- KFK39440 1891 545aa KFK39440

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
AALP_AA3G245100arabis_alpinaKFK3229528.16917.4136arabis_alpinaKFK3944040.36724.9541
AALP_AA3G245100arabis_alpinaKFK3363829.902915.534arabis_alpinaKFK3944028.256914.6789
AALP_AA3G245100arabis_alpinaKFK3552925.225214.6396arabis_alpinaKFK3944020.550511.9266

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
AALP_AA3G245100arabis_alpinaKFK3944025.871619.633chondrus_crispusCDF3235765.581449.7674
AALP_AA3G245100arabis_alpinaKFK3944053.027537.7982chlamydomonas_reinhardtiiPNW7499440.083228.5714
AALP_AA3G245100arabis_alpinaKFK3944085.688173.211papaver_somniferumRZC4983778.487467.0588
AALP_AA3G245100arabis_alpinaKFK3944085.321173.3945papaver_somniferumRZC5173983.93572.2022
AALP_AA3G245100arabis_alpinaKFK3944048.256942.0183papaver_somniferumRZC5087572.651963.2597
AALP_AA3G245100arabis_alpinaKFK3944071.926653.7615marchantia_polymorphaPTQ3801266.894250
AALP_AA3G245100arabis_alpinaKFK3944084.770674.1284ficus_caricaFCD_00005578-RA:cds83.243272.7928
AALP_AA3G245100arabis_alpinaKFK3944086.05574.6789cannabis_sativa_femalecds.evm.model.02.292085.428174.1348
AALP_AA3G245100arabis_alpinaKFK3944084.770674.1284citrullus_lanatusCla97C09G162380.182.206471.8861
AALP_AA3G245100arabis_alpinaKFK3944085.321171.5596beta_vulgarisKMT0171481.578968.4211
AALP_AA3G245100arabis_alpinaKFK3944085.137674.3119cucumis_meloMELO3C024409.2.182.562372.0641
AALP_AA3G245100arabis_alpinaKFK3944085.321174.4954cucumis_sativusKGN4554782.740272.242
AALP_AA3G245100arabis_alpinaKFK3944086.78975.5963populus_trichocarpaPotri.001G195300.1.v4.183.716872.9204
AALP_AA3G245100arabis_alpinaKFK3944096.330391.1927arabidopsis_thalianaAT3G21300.194.765389.7112
AALP_AA3G245100arabis_alpinaKFK3944083.853274.3119malus_domestica_goldenmRNA:MD17G015540083.242373.7705
AALP_AA3G245100arabis_alpinaKFK3944096.330391.5596brassica_napusCDY5145289.285784.8639
AALP_AA3G245100arabis_alpinaKFK3944095.779890.8257brassica_napusCDY5691789.536984.9057
AALP_AA3G245100arabis_alpinaKFK3944095.779891.1927brassica_junceacds.BjuB01g15390S88.474684.2373
AALP_AA3G245100arabis_alpinaKFK3944096.330391.3761brassica_junceacds.BjuA05g23740S88.832584.264
AALP_AA3G245100arabis_alpinaKFK3944086.605576.6973prunus_dulcisVVA2428387.245877.2643
AALP_AA3G245100arabis_alpinaKFK3944086.42276.3303prunus_persicaONI1565787.06176.8946
AALP_AA3G245100arabis_alpinaKFK3944077.798267.3394cajanus_cajanC.cajan_13348.t81.695670.7129
AALP_AA3G245100arabis_alpinaKFK3944082.752371.3761lupinus_angustifoliusOIW0378971.701161.8442
AALP_AA3G245100arabis_alpinaKFK3944052.477145.1376glycine_maxKRH0998476.675665.9517
AALP_AA3G245100arabis_alpinaKFK3944082.568873.0275glycine_maxKRH2334784.427874.6717
AALP_AA3G245100arabis_alpinaKFK3944082.752371.5596medicago_truncatulaAES6789480.535769.6429
AALP_AA3G245100arabis_alpinaKFK3944082.935873.0275vigna_angularisKOM4436979.577570.0704
AALP_AA3G245100arabis_alpinaKFK3944038.165135.2294pisum_sativumPsat5g294640.2.cds93.693786.4865
AALP_AA3G245100arabis_alpinaKFK3944047.706438.8991pisum_sativumPsat5g294680.1.cds71.428658.2418
AALP_AA3G245100arabis_alpinaKFK3944082.935873.7615phaseolus_vulgarisESW2254483.088273.8971
AALP_AA3G245100arabis_alpinaKFK3944083.486273.578vigna_unguiculataVigun05g277700.1.v1.274.468165.6301
AALP_AA3G245100arabis_alpinaKFK3944086.05574.1284manihot_esculentaOAY3655482.71671.2522
AALP_AA3G245100arabis_alpinaKFK3944082.201870.2752solanum_lycopersicumSolyc03g121260.3.149.339242.1806
AALP_AA3G245100arabis_alpinaKFK3944082.752371.0092solanum_tuberosumPGSC0003DMT40000643770.57960.5634
AALP_AA3G245100arabis_alpinaKFK3944082.935869.9083capsicum_annuumPHT8894879.577567.0775
AALP_AA3G245100arabis_alpinaKFK3944083.669771.3761sesamum_indicumSIN_1010360.t82.758670.5989
AALP_AA3G245100arabis_alpinaKFK3944083.302770.2752helianthus_annuusmRNA:HanXRQr2_Chr04g014061179.509667.0753
AALP_AA3G245100arabis_alpinaKFK3944084.036770.2752lactuca_sativacds-PLY94655.179.513966.4931
AALP_AA3G245100arabis_alpinaKFK3944076.697363.6697avena_sativa_sangAVESA.00010b.r2.3DG0522420.1.CDS75.179962.4101
AALP_AA3G245100arabis_alpinaKFK3944077.064263.8532avena_sativa_sangAVESA.00010b.r2.3CG0493580.3.CDS75.403962.4776
AALP_AA3G245100arabis_alpinaKFK3944076.880763.6697avena_sativa_sangAVESA.00010b.r2.3AG0421170.1.CDS75.359762.4101
AALP_AA3G245100arabis_alpinaKFK3944077.064263.8532avena_sativa_ot3098cds.AVESA.00001b.r3.3Cg0001935.671.186458.9831
AALP_AA3G245100arabis_alpinaKFK3944076.697363.6697avena_sativa_ot3098cds.AVESA.00001b.r3.3Dg0000305.171.698159.5197
AALP_AA3G245100arabis_alpinaKFK3944076.880763.6697avena_sativa_ot3098cds.AVESA.00001b.r3.3Ag0000845.170.896858.714
AALP_AA3G245100arabis_alpinaKFK3944029.357825.8716oryza_longistaminataAMDW01039695.1_FGP00192.485581.5029
AALP_AA3G245100arabis_alpinaKFK3944057.064248.8073oryza_brachyanthaOB01G15960.186.388973.8889
AALP_AA3G245100arabis_alpinaKFK3944077.614764.7706oryza_rufipogonORUFI01G06560.175.806463.2617
AALP_AA3G245100arabis_alpinaKFK3944077.064264.7706oryza_punctataOPUNC01G05790.172.664461.0727
AALP_AA3G245100arabis_alpinaKFK3944077.798264.7706oryza_glaberrimaORGLA01G0056900.175.985763.2617
AALP_AA3G245100arabis_alpinaKFK3944077.614764.7706sorghum_bicolorEES0013675.806463.2617
AALP_AA3G245100arabis_alpinaKFK3944076.697363.3028secale_cerealeSECCE3Rv1G0160940.174.776461.7174
AALP_AA3G245100arabis_alpinaKFK3944076.880764.0367setaria_viridisTKW1395475.224462.6571
AALP_AA3G245100arabis_alpinaKFK3944054.678944.0367setaria_italicaKQL0480970.449256.7376
AALP_AA3G245100arabis_alpinaKFK3944074.128464.9541asparagus_officinalisONK6659188.791277.8022
AALP_AA3G245100arabis_alpinaKFK3944077.064263.3028zea_maysZm00001eb121120_P00375.268861.828
AALP_AA3G245100arabis_alpinaKFK3944076.697363.8532triticum_aestivumTraesCS3D02G108100.174.910462.3656
AALP_AA3G245100arabis_alpinaKFK3944076.697363.6697triticum_aestivumTraesCS3B02G124400.174.910462.1864
AALP_AA3G245100arabis_alpinaKFK3944077.064264.0367triticum_aestivumTraesCS3A02G105900.175.134262.4329
AALP_AA3G245100arabis_alpinaKFK3944078.715665.6881ananas_comosusAco009933.1.mrna167.031255.9375
AALP_AA3G245100arabis_alpinaKFK3944079.63365.5046amborella_trichopodaERN1538979.926365.7459
AALP_AA3G245100arabis_alpinaKFK3944072.477160.367triticum_turgidumTRITD3Av1G032490.165.943254.9249
AALP_AA3G245100arabis_alpinaKFK3944076.697363.6697triticum_turgidumTRITD3Bv1G039700.174.910462.1864
AALP_AA3G245100arabis_alpinaKFK3944076.697363.3028brachypodium_distachyonKQK0314375.315362.1622
AALP_AA3G245100arabis_alpinaKFK3944085.688172.2936gossypium_raimondiiKJB7033884.75571.5064
AALP_AA3G245100arabis_alpinaKFK3944085.871673.7615corylus_avellanaCav07g09920.t173.354263.0094
AALP_AA3G245100arabis_alpinaKFK3944044.403740triticum_urartuTuG1812S0002924200.01.T0290.636781.6479
AALP_AA3G245100arabis_alpinaKFK3944086.605574.4954vitis_viniferaVitvi09g00224_P00183.245171.6049
AALP_AA3G245100arabis_alpinaKFK3944078.165164.2202eragrostis_curvulaTVU2140575.935862.3886
AALP_AA3G245100arabis_alpinaKFK3944083.669771.0092ipomoea_trilobaitb06g16240.t180.851168.617
AALP_AA3G245100arabis_alpinaKFK3944077.614764.7706oryza_sativaOs01t0193600-0175.942663.3752
AALP_AA3G245100arabis_alpinaKFK3944077.981764.5872oryza_meridionalisOMERI01G06170.176.576663.4234
AALP_AA3G245100arabis_alpinaKFK3944083.853272.844fraxinus_excelsiorFRAEX38873_v2_000222810.1.cds81.316770.6406
AALP_AA3G245100arabis_alpinaKFK3944077.614764.7706oryza_glumipatulaOGLUM01G06550.176.079163.4892
AALP_AA3G245100arabis_alpinaKFK3944077.798264.7706oryza_barthiiOBART01G05980.176.122163.3752
AALP_AA3G245100arabis_alpinaKFK3944068.440456.8807cynara_cardunculusKVH9797476.434463.5246
AALP_AA3G245100arabis_alpinaKFK3944082.385370.2752dioscorea_rotundataDRNTG_21894.182.084170.0183
AALP_AA3G245100arabis_alpinaKFK3944097.247792.1101eutrema_salsugineumESQ4773996.539291.439
AALP_AA3G245100arabis_alpinaKFK3944086.42276.5138prunus_aviumPav_sc0001797.1_g400.1.mk:mrna87.06177.0795
AALP_AA3G245100arabis_alpinaKFK3944085.688174.6789quercus_lobataQL05p016421:mrna85.374874.4059
AALP_AA3G245100arabis_alpinaKFK3944051.743136.6972galdieria_sulphurariaEME3161351.08736.2319
AALP_AA3G245100arabis_alpinaKFK3944096.513891.7431brassica_rapa_ro18A05p036830.1_BraROA.194.434589.7666
AALP_AA3G245100arabis_alpinaKFK3944034.128419.633saccharomyces_cerevisiaeYKR056W29.10816.7449
AALP_AA3G245100arabis_alpinaKFK3944076.880763.8532aegilops_tauschiiAET3Gv20233900.168.914557.2368
AALP_AA3G245100arabis_alpinaKFK3944055.045946.2385eucalyptus_grandisKCW5362879.575666.8435
AALP_AA3G245100arabis_alpinaKFK3944083.486273.211eucalyptus_grandisKCW5363289.39178.389
AALP_AA3G245100arabis_alpinaKFK3944052.293646.422pistacia_veracds-EVM0003014.193.442682.9508
AALP_AA3G245100arabis_alpinaKFK3944086.05573.945pistacia_veracds-EVM0009176.185.272773.2727
AALP_AA3G245100arabis_alpinaKFK3944081.284472.2936juglans_regiacds.Jr12_18320_p186.523476.9531
AALP_AA3G245100arabis_alpinaKFK3944045.504641.1009juglans_regiacds.Jr12_18310_p192.883983.8951
AALP_AA3G245100arabis_alpinaKFK3944077.064263.8532saccharum_spontaneumSspon.03G0022950-3C-mRNA-1:cds71.550359.2845
AALP_AA3G245100arabis_alpinaKFK3944083.853270.8257nicotiana_attenuataOIT2095080.599668.0776
AALP_AA3G245100arabis_alpinaKFK3944064.770655.9633triticum_dicoccoidesTRIDC3BG017510.180.4169.4761
AALP_AA3G245100arabis_alpinaKFK3944063.853255.5963triticum_dicoccoidesTRIDC3AG013050.380.742570.3016
AALP_AA3G245100arabis_alpinaKFK3944083.669773.211olea_europaeaOE9A077673C181.138870.9964
AALP_AA3G245100arabis_alpinaKFK3944069.908353.0275selaginella_moellendorffiiEFJ2485671.082153.9179
AALP_AA3G245100arabis_alpinaKFK3944070.275253.0275selaginella_moellendorffiiEFJ3027671.455253.9179
AALP_AA3G245100arabis_alpinaKFK3944083.486270.8257musa_acuminataMa02_p21290.181.98269.5496
AALP_AA3G245100arabis_alpinaKFK3944071.743159.0826eragrostis_tefEt_9B_064165.CDS74.904261.6858
AALP_AA3G245100arabis_alpinaKFK3944078.165164.4037eragrostis_tefEt_3B_030897.CDS75.935862.5668
AALP_AA3G245100arabis_alpinaKFK3944084.403772.4771actinidia_chinensisPSS0737681.996470.41
AALP_AA3G245100arabis_alpinaKFK3944085.321174.4954quercus_subercds-POF11318.185.321174.4954
AALP_AA3G245100arabis_alpinaKFK3944085.137674.6789quercus_subercds-POF11854.185.137674.6789
AALP_AA3G245100arabis_alpinaKFK3944019.266118.5321camelina_sativaCsa15g031700.192.920489.3805
AALP_AA3G245100arabis_alpinaKFK3944082.935875.7798camelina_sativaCsa19g029360.191.313183.4343
AALP_AA3G245100arabis_alpinaKFK3944096.513891.5596camelina_sativaCsa01g024410.194.434589.5871
AALP_AA3G245100arabis_alpinaKFK3944095.963391.3761camelina_sativaCsa15g031720.196.316891.7127
AALP_AA3G245100arabis_alpinaKFK3944076.697363.4862hordeum_vulgareHORVU.MOREX.r3.3HG0236330.274.776461.8962
AALP_AA3G245100arabis_alpinaKFK3944083.486271.7431daucus_carotaKZM8102881.687670.1975
AALP_AA3G245100arabis_alpinaKFK3944075.596363.1193leersia_perrieriLPERR01G05690.177.298364.5403
AALP_AA3G245100arabis_alpinaKFK3944051.376135.4128ostreococcus_lucimarinusABO9374952.238836.0075
AALP_AA3G245100arabis_alpinaKFK3944085.321172.4771theobroma_cacaoEOY2700985.635472.744
AALP_AA3G245100arabis_alpinaKFK3944086.972575.5963citrus_clementinaESR3970183.597972.6631
AALP_AA3G245100arabis_alpinaKFK3944076.697365.1376nymphaea_colorataNC1G0132420.1:cds84.274271.5726
AALP_AA3G245100arabis_alpinaKFK3944076.880763.3028echinochloa_crusgalliscaffold36.312.cds69.833357.5
AALP_AA3G245100arabis_alpinaKFK3944077.247764.2202echinochloa_crusgalliscaffold4.102.cds49.297440.9836
AALP_AA3G245100arabis_alpinaKFK3944095.596390.6422brassica_oleraceaBo5g101210.189.365384.7341
AALP_AA3G245100arabis_alpinaKFK3944083.302770.0917chenopodium_quinoaAUR62023880-RA:cds80.35467.6106
AALP_AA3G245100arabis_alpinaKFK3944071.926654.4954physcomitrium_patensPp3c25_5440V3.865.333349.5
AALP_AA3G245100arabis_alpinaKFK3944076.880764.9541panicum_halliiPUZ5848275.359763.6691
AALP_AA3G245100arabis_alpinaKFK3944082.018371.7431trifolium_pratenseTp57577_TGAC_v2_mRNA677280.107570.0717
AALP_AA3G245100arabis_alpinaKFK3944096.146891.0092arabidopsis_hallerig11232.t194.755989.6926
AALP_AA3G245100arabis_alpinaKFK3944068.623956.8807digitaria_exilisDexi5B01G0003340.1:cds73.91361.2648
AALP_AA3G245100arabis_alpinaKFK3944055.963345.3211digitaria_exilisDexi5A01G0003310.1:cds70.114956.7816
AALP_AA3G245100arabis_alpinaKFK3944095.412890.8257arabidopsis_lyratascaffold_302544.193.023388.551
AALP_AA3G245100arabis_alpinaKFK3944086.238575.5963rosa_chinensisPRQ5122286.556275.8748
AALP_AA3G245100arabis_alpinaKFK3944061.467946.789chara_brauniiGBG7172845.953434.9794
AALP_AA3G245100arabis_alpinaKFK3944062.385352.844corymbia_citriodoracds-KAF8031022.178.160966.2069
AALP_AA3G245100arabis_alpinaKFK3944044.770640corymbia_citriodoracds-KAF7847848.192.424282.5758
AALP_AA3G245100arabis_alpinaKFK3944084.220269.7248kalanchoe_fedtschenkoiKaladp0092s0224.1.v1.183.606669.2168
AALP_AA3G245100arabis_alpinaKFK3944083.119371.1927coffea_canephoraCDO9795077.435966.3248
AALP_AA3G245100arabis_alpinaKFK3944079.266170.4587vigna_radiataVradi05g20840.179.704870.8487
AALP_AA3G245100arabis_alpinaKFK3944077.247764.5872oryza_nivaraONIVA01G06930.175.583563.1957

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression