Description

Ensembl ID A4U43_C07F33480 Gene ID Accession -
Symbol Alias - Full Name uncharacterized protein
Status Confidence Length 24275 bases Strand Minus strand
Position 7 : 138051482 - 138075756 RNA binding domain ProRS-C_1 , HGTP_anticodon , tRNA-synt_2b
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ONK65088 ProRS-C_1 PF09180 9.8e-20 1
ONK65088 HGTP_anticodon PF03129 3.1e-15 2
ONK65088 tRNA-synt_2b PF00587 2e-19 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
A4U43_C07F33480asparagus_officinalisONK7426695.871691.5138asparagus_officinalisONK6508870.134266.9463
A4U43_C07F33480asparagus_officinalisONK7891721.844711.9741asparagus_officinalisONK6508822.65112.4161
A4U43_C07F33480asparagus_officinalisONK6850825.820912.0896asparagus_officinalisONK6508829.026813.5906
A4U43_C07F33480asparagus_officinalisONK6652746.093825.5208asparagus_officinalisONK6508829.69816.443
A4U43_C07F33480asparagus_officinalisONK7880232.790420.9555asparagus_officinalisONK6508850.671132.3825

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
A4U43_C07F33480asparagus_officinalisONK6508850.671137.5839chondrus_crispusCDF3955664.946248.172
A4U43_C07F33480asparagus_officinalisONK6508868.624256.5436chlamydomonas_reinhardtiiPNW7920672.905560.0713
A4U43_C07F33480asparagus_officinalisONK6508875.838962.9195physcomitrium_patensPp3c21_580V3.174.587561.8812
A4U43_C07F33480asparagus_officinalisONK6508871.812162.0805marchantia_polymorphaPTQ3836275.087764.9123
A4U43_C07F33480asparagus_officinalisONK6508877.852369.7987papaver_somniferumRZC4538683.754575.0903
A4U43_C07F33480asparagus_officinalisONK6508879.530270.1342papaver_somniferumRZC6504285.559675.4513
A4U43_C07F33480asparagus_officinalisONK6508877.852368.9597cannabis_sativa_femalecds.evm.model.05.137985.294175.5515
A4U43_C07F33480asparagus_officinalisONK6508852.852346.3087ficus_caricaFCD_00004420-RA:cds9078.8571
A4U43_C07F33480asparagus_officinalisONK6508877.013469.9664beta_vulgarisKMS9928785.31677.5093
A4U43_C07F33480asparagus_officinalisONK6508878.523570.1342citrullus_lanatusCla97C05G090370.184.782675.7246
A4U43_C07F33480asparagus_officinalisONK6508879.69871.8121theobroma_cacaoEOY2328579.431471.5719
A4U43_C07F33480asparagus_officinalisONK6508878.355769.9664cucumis_meloMELO3C019492.2.184.448575.4069
A4U43_C07F33480asparagus_officinalisONK6508873.993365.9396cucumis_sativusKGN5756084.160375
A4U43_C07F33480asparagus_officinalisONK6508820.637618.4564populus_trichocarpaPotri.004G078932.2.v4.154.424848.6726
A4U43_C07F33480asparagus_officinalisONK6508878.355769.4631populus_trichocarpaPotri.017G142500.1.v4.185.374875.6856
A4U43_C07F33480asparagus_officinalisONK6508820.637619.1275populus_trichocarpaPotri.004G078866.2.v4.186.01479.7203
A4U43_C07F33480asparagus_officinalisONK6508877.013468.2886arabidopsis_thalianaAT5G52520.184.530474.954
A4U43_C07F33480asparagus_officinalisONK6508876.677867.6174brassica_napusCDY2706284.317374.3542
A4U43_C07F33480asparagus_officinalisONK6508849.496642.7852brassica_napusCDY0053474.683564.557
A4U43_C07F33480asparagus_officinalisONK6508871.476562.7517brassica_napusCDX9165684.023773.7673
A4U43_C07F33480asparagus_officinalisONK6508875.671166.7785brassica_napusCDY2782484.299174.3925
A4U43_C07F33480asparagus_officinalisONK6508845.637639.2617brassica_junceacds.BjuA10g08730S75.346364.8199
A4U43_C07F33480asparagus_officinalisONK6508876.845667.7852brassica_junceacds.BjuB02g25400S77.495868.3587
A4U43_C07F33480asparagus_officinalisONK6508876.510167.4497brassica_junceacds.BjuA02g28950S84.132874.1697
A4U43_C07F33480asparagus_officinalisONK6508876.677867.6174brassica_junceacds.BjuB05g35810S84.629674.6296
A4U43_C07F33480asparagus_officinalisONK6508877.852369.1275prunus_persicaONI0671584.981775.4579
A4U43_C07F33480asparagus_officinalisONK6508862.583954.3624prunus_persicaONI2538571.455962.069
A4U43_C07F33480asparagus_officinalisONK6508878.355769.6309prunus_dulcisVVA3197685.531176.0073
A4U43_C07F33480asparagus_officinalisONK6508873.154463.9262prunus_dulcisVVA1116076.223866.6084
A4U43_C07F33480asparagus_officinalisONK6508878.523570.6376cajanus_cajanC.cajan_15998.t85.714377.1062
A4U43_C07F33480asparagus_officinalisONK6508878.859170.302medicago_truncatulaAES7321586.715977.3063
A4U43_C07F33480asparagus_officinalisONK6508877.516869.7987lupinus_angustifoliusOIV9144686.679278.0488
A4U43_C07F33480asparagus_officinalisONK6508878.020170.6376phaseolus_vulgarisESW2419385.164877.1062
A4U43_C07F33480asparagus_officinalisONK6508879.530271.4765glycine_maxKRH3839386.813278.022
A4U43_C07F33480asparagus_officinalisONK6508878.859170.9732glycine_maxKRH0887986.080677.4725
A4U43_C07F33480asparagus_officinalisONK6508877.852369.6309pisum_sativumPsat5g045320.1.cds85.294176.2868
A4U43_C07F33480asparagus_officinalisONK6508877.852370.4698vigna_unguiculataVigun04g150200.1.v1.284.981776.9231
A4U43_C07F33480asparagus_officinalisONK6508878.020170.1342vigna_angularisKOM5514285.164876.5568
A4U43_C07F33480asparagus_officinalisONK6508876.174567.4497sesamum_indicumSIN_1009149.t82.246472.8261
A4U43_C07F33480asparagus_officinalisONK6508877.34970.6376helianthus_annuusmRNA:HanXRQr2_Chr04g018196186.168278.6916
A4U43_C07F33480asparagus_officinalisONK6508877.852371.3087helianthus_annuusmRNA:HanXRQr2_Chr07g031669185.608978.4133
A4U43_C07F33480asparagus_officinalisONK6508877.013470.1342lactuca_sativacds-PLY68756.184.37576.8382
A4U43_C07F33480asparagus_officinalisONK6508874.664466.1074solanum_tuberosumPGSC0003DMT40007079881.352872.0293
A4U43_C07F33480asparagus_officinalisONK6508874.664465.604solanum_lycopersicumSolyc01g096870.3.181.352871.4808
A4U43_C07F33480asparagus_officinalisONK6508878.523571.1409manihot_esculentaOAY3034585.557677.5137
A4U43_C07F33480asparagus_officinalisONK6508834.228230.5369avena_sativa_sangAVESA.00010b.r2.UnG1440300.1.CDS82.258173.3871
A4U43_C07F33480asparagus_officinalisONK6508876.006769.9664avena_sativa_sangAVESA.00010b.r2.2CG0289320.1.CDS83.579376.9373
A4U43_C07F33480asparagus_officinalisONK6508876.342370.302avena_sativa_sangAVESA.00010b.r2.2AG0210900.1.CDS83.948377.3063
A4U43_C07F33480asparagus_officinalisONK6508822.315419.2953avena_sativa_sangAVESA.00010b.r2.UnG1456980.1.CDS83.647872.327
A4U43_C07F33480asparagus_officinalisONK6508875.503468.7919lolium_perennecds.KYUSt_chr2.2845182.872975.5064
A4U43_C07F33480asparagus_officinalisONK6508869.630964.2617oryza_brachyanthaOB07G13150.192.633985.4911
A4U43_C07F33480asparagus_officinalisONK6508876.174570.302oryza_rufipogonORUFI07G03850.183.302776.8807
A4U43_C07F33480asparagus_officinalisONK6508876.342370.4698oryza_punctataOPUNC07G03990.183.029276.6423
A4U43_C07F33480asparagus_officinalisONK6508876.510170.6376avena_sativa_ot3098cds.AVESA.00001b.r3.2Ag0000634.182.310575.9928
A4U43_C07F33480asparagus_officinalisONK6508876.845670.6376avena_sativa_ot3098cds.AVESA.00001b.r3.2Dg0003169.283.121676.4065
A4U43_C07F33480asparagus_officinalisONK6508876.006769.9664avena_sativa_ot3098cds.AVESA.00001b.r3.2Cg0001324.183.579376.9373
A4U43_C07F33480asparagus_officinalisONK6508875.838969.4631secale_cerealeSECCE2Rv1G0095000.183.54976.525
A4U43_C07F33480asparagus_officinalisONK6508876.174570.302oryza_glaberrimaORGLA07G0035400.183.302776.8807
A4U43_C07F33480asparagus_officinalisONK6508869.295364.094oryza_longistaminataKN539816.1_FGP00489.393982.684
A4U43_C07F33480asparagus_officinalisONK6508876.342369.6309setaria_italicaKQL2254879.406672.4258
A4U43_C07F33480asparagus_officinalisONK6508876.174569.4631sorghum_bicolorEER9590085.660478.1132
A4U43_C07F33480asparagus_officinalisONK6508876.510169.7987setaria_viridisTKW3057684.916277.4674
A4U43_C07F33480asparagus_officinalisONK6508876.006769.6309triticum_aestivumTraesCS2B02G270500.183.733876.7098
A4U43_C07F33480asparagus_officinalisONK6508876.342369.9664triticum_aestivumTraesCS2A02G246200.184.103577.0795
A4U43_C07F33480asparagus_officinalisONK6508876.342369.9664triticum_aestivumTraesCS2D02G248600.184.103577.0795
A4U43_C07F33480asparagus_officinalisONK6508812.91956.37584homo_sapiensENSP0000028496722.781111.2426
A4U43_C07F33480asparagus_officinalisONK6508878.859173.4899ananas_comosusAco008765.1.mrna183.481377.7975
A4U43_C07F33480asparagus_officinalisONK6508876.342369.9664triticum_urartuTuG1812G0200002611.01.T0184.103577.0795
A4U43_C07F33480asparagus_officinalisONK6508876.006770.1342oryza_glumipatulaOGLUM07G03560.183.119376.6973
A4U43_C07F33480asparagus_officinalisONK650887566.2752ipomoea_trilobaitb03g29730.t182.777873.1481
A4U43_C07F33480asparagus_officinalisONK6508811.40945.20134drosophila_melanogasterFBpp007542520.42049.30931
A4U43_C07F33480asparagus_officinalisONK6508857.382552.5168oryza_sativaOs07t0165000-0190.716283.0239
A4U43_C07F33480asparagus_officinalisONK6508876.677867.953prunus_aviumPav_sc0000370.1_g300.1.mk:mrna84.629675
A4U43_C07F33480asparagus_officinalisONK6508873.154464.9329prunus_aviumPav_sc0001405.1_g1390.1.mk:mrna77.857169.1071
A4U43_C07F33480asparagus_officinalisONK6508875.167868.1208brachypodium_distachyonKQK2076083.895176.03
A4U43_C07F33480asparagus_officinalisONK6508876.342369.9664aegilops_tauschiiAET2Gv20553400.184.103577.0795
A4U43_C07F33480asparagus_officinalisONK650887568.4564chenopodium_quinoaAUR62037623-RA:cds83.864976.5478
A4U43_C07F33480asparagus_officinalisONK6508870.469862.0805chenopodium_quinoaAUR62040861-RA:cds49.295843.4272
A4U43_C07F33480asparagus_officinalisONK6508876.342367.953arabis_alpinaKFK2685884.7375.419
A4U43_C07F33480asparagus_officinalisONK6508878.691371.4765rosa_chinensisPRQ1810386.213278.3088
A4U43_C07F33480asparagus_officinalisONK6508874.161166.6107nicotiana_attenuataOIT0753281.2572.9779
A4U43_C07F33480asparagus_officinalisONK6508881.375871.3087quercus_lobataQL09p013112:mrna85.237374.6924
A4U43_C07F33480asparagus_officinalisONK6508819.798716.6107musa_acuminataMa07_p07740.180.272167.3469
A4U43_C07F33480asparagus_officinalisONK6508879.865872.4832musa_acuminataMa05_p25960.185.611577.6978
A4U43_C07F33480asparagus_officinalisONK6508874.832267.4497olea_europaeaOE9A106857C181.238673.224
A4U43_C07F33480asparagus_officinalisONK6508838.422831.3758olea_europaeaOE9A058702C163.966552.2346
A4U43_C07F33480asparagus_officinalisONK6508877.013470.302panicum_halliiPUZ6850585.474978.0261
A4U43_C07F33480asparagus_officinalisONK6508877.852370.1342cynara_cardunculusKVI1020785.294176.8382
A4U43_C07F33480asparagus_officinalisONK6508878.355768.9597nymphaea_colorataNC13G0195330.1:cds79.557170.017
A4U43_C07F33480asparagus_officinalisONK6508841.44335.2349nymphaea_colorataNC13G0059500.1:cds85.467172.6644
A4U43_C07F33480asparagus_officinalisONK6508821.644319.4631nymphaea_colorataNC13G0059490.1:cds71.666764.4444
A4U43_C07F33480asparagus_officinalisONK6508840.771834.5638nymphaea_colorataNC13G0059460.1:cds84.08371.2803
A4U43_C07F33480asparagus_officinalisONK6508816.44314.9329nymphaea_colorataNC13G0059450.1:cds89.090980.9091
A4U43_C07F33480asparagus_officinalisONK6508878.187972.3154dioscorea_rotundataDRNTG_01809.184.573578.2214
A4U43_C07F33480asparagus_officinalisONK650887569.1275triticum_turgidumTRITD2Bv1G123540.286.127279.3834
A4U43_C07F33480asparagus_officinalisONK6508876.342369.9664triticum_turgidumTRITD2Av1G132440.184.103577.0795
A4U43_C07F33480asparagus_officinalisONK6508877.013468.2886arabidopsis_hallerig08257.t184.686375.0923
A4U43_C07F33480asparagus_officinalisONK6508877.013467.2819eutrema_salsugineumESQ4326884.842974.122
A4U43_C07F33480asparagus_officinalisONK6508877.181268.1208pistacia_veracds-EVM0012385.183.182673.4177
A4U43_C07F33480asparagus_officinalisONK6508869.295364.094oryza_indicaBGIOSGA025205-PA92.187585.2679
A4U43_C07F33480asparagus_officinalisONK6508876.677867.6174kalanchoe_fedtschenkoiKaladp0079s0109.1.v1.184.162174.2173
A4U43_C07F33480asparagus_officinalisONK6508876.174569.9664saccharum_spontaneumSspon.02G0042180-2D-mRNA-1:cds84.543877.6536
A4U43_C07F33480asparagus_officinalisONK6508873.322267.1141saccharum_spontaneumSspon.02G0042180-1B-mRNA-1:cds83.079876.0456
A4U43_C07F33480asparagus_officinalisONK6508878.691371.9799corymbia_citriodoracds-KAF8027760.185.583978.2847
A4U43_C07F33480asparagus_officinalisONK6508880.033670.8054citrus_clementinaESR3523985.483975.6272
A4U43_C07F33480asparagus_officinalisONK6508812.75176.87919caenorhabditis_elegansY46H3A.7a.125.762713.8983
A4U43_C07F33480asparagus_officinalisONK650887567.2819fraxinus_excelsiorFRAEX38873_v2_000154690.2.cds81.420873.0419
A4U43_C07F33480asparagus_officinalisONK6508865.60458.8926fraxinus_excelsiorFRAEX38873_v2_000186790.1.cds83.014974.5223
A4U43_C07F33480asparagus_officinalisONK6508876.677869.7987echinochloa_crusgalliscaffold409.45.cds85.102477.4674
A4U43_C07F33480asparagus_officinalisONK6508876.510169.6309echinochloa_crusgalliscaffold66.156.cds84.916277.2812
A4U43_C07F33480asparagus_officinalisONK6508876.677869.6309echinochloa_crusgalliscaffold28.598.cds85.102477.2812
A4U43_C07F33480asparagus_officinalisONK6508861.241651.3423ostreococcus_lucimarinusABO9950281.473268.3036
A4U43_C07F33480asparagus_officinalisONK6508875.167869.1275triticum_dicoccoidesTRIDC2AG033880.186.153879.2308
A4U43_C07F33480asparagus_officinalisONK6508874.328968.6242triticum_dicoccoidesTRIDC2BG038810.487.549480.83
A4U43_C07F33480asparagus_officinalisONK6508878.691370.302trifolium_pratenseTp57577_TGAC_v2_mRNA2693386.851977.5926
A4U43_C07F33480asparagus_officinalisONK6508876.510167.4497brassica_rapa_ro18A02p018010.1_BraROA.184.132874.1697
A4U43_C07F33480asparagus_officinalisONK6508851.845645.1342brassica_rapa_ro18A10p014960.1_BraROA.175.921466.0934
A4U43_C07F33480asparagus_officinalisONK6508875.335669.9664leersia_perrieriLPERR07G03650.189.883.4
A4U43_C07F33480asparagus_officinalisONK6508878.187971.6443eucalyptus_grandisKCW9065285.036577.9197
A4U43_C07F33480asparagus_officinalisONK6508878.523569.7987actinidia_chinensisPSS3304486.029476.4706
A4U43_C07F33480asparagus_officinalisONK6508878.355769.1275actinidia_chinensisPSS3237684.29674.3682
A4U43_C07F33480asparagus_officinalisONK6508848.825542.6175actinidia_chinensisPSS3429972.7563.5
A4U43_C07F33480asparagus_officinalisONK6508873.825565.2685brassica_oleraceaBo9g108180.184.291274.5211
A4U43_C07F33480asparagus_officinalisONK6508876.174566.9463brassica_oleraceaBo2g047670.183.763873.6162
A4U43_C07F33480asparagus_officinalisONK6508876.677868.9597vitis_viniferaVitvi16g01087_P00183.546675.1371
A4U43_C07F33480asparagus_officinalisONK6508876.677867.953arabidopsis_lyratafgenesh2_kg.8__1136__AT5G52520.184.317374.7232
A4U43_C07F33480asparagus_officinalisONK6508872.818867.2819oryza_barthiiOBART07G04150.187.323980.6841
A4U43_C07F33480asparagus_officinalisONK6508876.677867.7852camelina_sativaCsa02g047660.184.007474.2647
A4U43_C07F33480asparagus_officinalisONK6508876.845667.953camelina_sativaCsa11g084250.184.191274.4485
A4U43_C07F33480asparagus_officinalisONK6508873.489964.2617camelina_sativaCsa18g023460.182.797772.4008
A4U43_C07F33480asparagus_officinalisONK6508877.34968.6242daucus_carotaKZN0063084.432274.9084
A4U43_C07F33480asparagus_officinalisONK6508876.510168.6242daucus_carotaKZM9812184.444475.7407
A4U43_C07F33480asparagus_officinalisONK6508876.510170.302eragrostis_curvulaTVU4152685.074678.1716
A4U43_C07F33480asparagus_officinalisONK6508821.812115.604coffea_canephoraCDP1578768.062848.6911
A4U43_C07F33480asparagus_officinalisONK6508826.174518.7919coffea_canephoraCDP0487174.641253.5885
A4U43_C07F33480asparagus_officinalisONK6508820.134214.7651coffea_canephoraCDP2211264.171147.0588
A4U43_C07F33480asparagus_officinalisONK6508869.630963.5906coffea_canephoraCDP0515692.633984.5982
A4U43_C07F33480asparagus_officinalisONK6508871.812162.9195selaginella_moellendorffiiEFJ2810381.060671.0227
A4U43_C07F33480asparagus_officinalisONK6508871.644362.5839selaginella_moellendorffiiEFJ0777880.871270.6439
A4U43_C07F33480asparagus_officinalisONK6508858.053743.1208cyanidioschyzon_merolaeCMJ098CT57.956443.0486
A4U43_C07F33480asparagus_officinalisONK6508820.805415.7718cyanidioschyzon_merolaeCMJ100CT70.056553.1073
A4U43_C07F33480asparagus_officinalisONK6508876.342369.7987zea_maysZm00001eb300750_P00184.7377.4674
A4U43_C07F33480asparagus_officinalisONK6508878.859169.6309amborella_trichopodaERM9651684.99175.0452
A4U43_C07F33480asparagus_officinalisONK6508869.798760.7383quercus_subercds-POE51169.182.868572.1116
A4U43_C07F33480asparagus_officinalisONK6508857.214841.7785galdieria_sulphurariaEME2860159.929743.761
A4U43_C07F33480asparagus_officinalisONK6508876.510170.4698eragrostis_tefEt_5B_044258.CDS85.074678.3582
A4U43_C07F33480asparagus_officinalisONK6508871.979965.7718eragrostis_tefEt_5A_041599.CDS83.789176.5625
A4U43_C07F33480asparagus_officinalisONK6508878.691370.1342juglans_regiacds.Jr13_30960_p184.201175.0449
A4U43_C07F33480asparagus_officinalisONK6508876.006770.1342oryza_meridionalisOMERI07G02660.183.119376.6973
A4U43_C07F33480asparagus_officinalisONK6508880.033672.8188corylus_avellanaCav01g00360.t177.81470.7993
A4U43_C07F33480asparagus_officinalisONK6508815.77188.72483ciona_savignyiENSCSAVP0000000740821.21911.7381
A4U43_C07F33480asparagus_officinalisONK6508878.691370.302corchorus_capsularisOMP0094765.870858.8483
A4U43_C07F33480asparagus_officinalisONK6508878.355771.3087gossypium_raimondiiKJB5274484.75577.1325
A4U43_C07F33480asparagus_officinalisONK6508866.778557.3825chara_brauniiGBG7102758.529450.2941
A4U43_C07F33480asparagus_officinalisONK6508876.174569.2953hordeum_vulgareHORVU.MOREX.r3.2HG0150730.183.918776.3401
A4U43_C07F33480asparagus_officinalisONK6508876.677870.302digitaria_exilisDexi2B01G0003580.1:cds84.944277.881
A4U43_C07F33480asparagus_officinalisONK6508876.510170.302digitaria_exilisDexi2A01G0003750.1:cds84.758477.881
A4U43_C07F33480asparagus_officinalisONK6508878.020169.7987vigna_radiataVradi01g13670.181.151872.6003
A4U43_C07F33480asparagus_officinalisONK6508826.677918.2886vigna_radiataVradi02g10590.155.789538.2456
A4U43_C07F33480asparagus_officinalisONK6508876.174570.302oryza_nivaraONIVA07G02730.183.302776.8807

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression