Description

Ensembl ID A4U43_C07F18400 Gene ID Accession -
Symbol Alias - Full Name uncharacterized protein
Status Confidence Length 13902 bases Strand Minus strand
Position 7 : 62770601 - 62784502 RNA binding domain tRNA-synt_His , HGTP_anticodon , tRNA-synt_2b
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ONK63738 tRNA-synt_His PF13393 1.9e-39 1
ONK63738 HGTP_anticodon PF03129 1.6e-08 2
ONK63738 tRNA-synt_2b PF00587 2e-12 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
A4U43_C07F18400asparagus_officinalisONK8013916.13358.90125asparagus_officinalisONK6373826.48414.6119
A4U43_C07F18400asparagus_officinalisONK5579232.52618.6851asparagus_officinalisONK6373821.461212.3288

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
A4U43_C07F18400asparagus_officinalisONK6373872.374459.1324physcomitrium_patensPp3c7_24050V3.365.767653.7344
A4U43_C07F18400asparagus_officinalisONK6373874.429259.589physcomitrium_patensPp3c1_6360V3.365.725852.621
A4U43_C07F18400asparagus_officinalisONK6373871.689556.621marchantia_polymorphaPTQ4773416.90913.3549
A4U43_C07F18400asparagus_officinalisONK6373834.474926.9406marchantia_polymorphaPTQ3704868.325853.3937
A4U43_C07F18400asparagus_officinalisONK6373877.625661.4155papaver_somniferumRZC6215368.273154.0161
A4U43_C07F18400asparagus_officinalisONK6373877.853961.6438papaver_somniferumRZC6865349.636139.3013
A4U43_C07F18400asparagus_officinalisONK6373878.538863.6986cannabis_sativa_femalecds.novel_model_3589_5bd9a17a66.281353.7572
A4U43_C07F18400asparagus_officinalisONK6373876.255760.9589ficus_caricaFCD_00005301-RA:cds63.377650.6641
A4U43_C07F18400asparagus_officinalisONK6373877.853965.0685beta_vulgarisKMT0622367.391356.3241
A4U43_C07F18400asparagus_officinalisONK6373877.853964.3836citrullus_lanatusCla97C04G076140.167.258455.6213
A4U43_C07F18400asparagus_officinalisONK6373878.538865.0685theobroma_cacaoEOY0791567.984256.3241
A4U43_C07F18400asparagus_officinalisONK6373878.310563.4703cucumis_meloMELO3C024475.2.167.652954.8323
A4U43_C07F18400asparagus_officinalisONK6373878.082263.6986cucumis_sativusKGN4819567.455655.0296
A4U43_C07F18400asparagus_officinalisONK6373878.995463.6986populus_trichocarpaPotri.006G124400.2.v4.168.379455.1383
A4U43_C07F18400asparagus_officinalisONK6373834.931528.3105arabidopsis_thalianaAT5G03406.158.174947.1483
A4U43_C07F18400asparagus_officinalisONK6373876.940660.7306arabidopsis_thalianaAT3G46100.169.341654.7325
A4U43_C07F18400asparagus_officinalisONK6373877.16961.6438brassica_napusCDY1207669.262355.3279
A4U43_C07F18400asparagus_officinalisONK6373876.48461.4155brassica_napusCDX9027068.788555.2361
A4U43_C07F18400asparagus_officinalisONK6373875.799161.1872brassica_junceacds.BjuB03g45960S68.032854.918
A4U43_C07F18400asparagus_officinalisONK6373876.940661.6438brassica_junceacds.BjuA08g20310S69.199255.4415
A4U43_C07F18400asparagus_officinalisONK6373878.995465.2968prunus_persicaONI0299070.325258.1301
A4U43_C07F18400asparagus_officinalisONK6373878.995465.7534prunus_dulcisVVA1729765.160154.2373
A4U43_C07F18400asparagus_officinalisONK6373822.374416.6667cajanus_cajanC.cajan_47676.t82.352961.3445
A4U43_C07F18400asparagus_officinalisONK6373878.310564.3836malus_domestica_goldenmRNA:MD04G00772007057.551
A4U43_C07F18400asparagus_officinalisONK6373878.995464.8402malus_domestica_goldenmRNA:MD12G009160070.612257.9592
A4U43_C07F18400asparagus_officinalisONK6373878.995464.6119medicago_truncatulaKEH2403169.061956.487
A4U43_C07F18400asparagus_officinalisONK6373877.853964.6119lupinus_angustifoliusOIW0514469.450157.6375
A4U43_C07F18400asparagus_officinalisONK6373878.995463.9269phaseolus_vulgarisESW3476669.061955.8882
A4U43_C07F18400asparagus_officinalisONK6373879.223765.2968glycine_maxKRH6772769.261557.0858
A4U43_C07F18400asparagus_officinalisONK6373878.538863.6986pisum_sativumPsat3g042640.1.cds68.662755.6886
A4U43_C07F18400asparagus_officinalisONK6373878.538864.1553vigna_unguiculataVigun01g161900.1.v1.268.662756.0878
A4U43_C07F18400asparagus_officinalisONK6373878.538863.9269vigna_angularisKOM2929968.525955.7769
A4U43_C07F18400asparagus_officinalisONK6373878.767165.2968sesamum_indicumSIN_1018707.t69.416557.5453
A4U43_C07F18400asparagus_officinalisONK6373874.200961.4155capsicum_annuumPHT8867580.445566.5842
A4U43_C07F18400asparagus_officinalisONK6373876.48462.3288helianthus_annuusmRNA:HanXRQr2_Chr14g065903169.937456.9937
A4U43_C07F18400asparagus_officinalisONK6373877.625663.9269lactuca_sativacds-PLY75214.165.76454.1586
A4U43_C07F18400asparagus_officinalisONK6373855.479543.6073solanum_tuberosumPGSC0003DMT40001439382.094664.527
A4U43_C07F18400asparagus_officinalisONK6373876.48462.1005solanum_lycopersicumSolyc03g119270.2.124.614319.9853
A4U43_C07F18400asparagus_officinalisONK6373820.319616.6667manihot_esculentaOAY3203356.329146.2025
A4U43_C07F18400asparagus_officinalisONK6373879.223763.9269manihot_esculentaOAY4272069.959756.4516
A4U43_C07F18400asparagus_officinalisONK6373863.926951.5982manihot_esculentaOAY4100163.063150.9009
A4U43_C07F18400asparagus_officinalisONK6373886.529779.6804avena_sativa_sangAVESA.00010b.r2.6DG1160310.1.CDS79.957873.6287
A4U43_C07F18400asparagus_officinalisONK6373886.75879.6804avena_sativa_sangAVESA.00010b.r2.6CG1136330.1.CDS8073.4737
A4U43_C07F18400asparagus_officinalisONK6373886.529779.4521avena_sativa_sangAVESA.00010b.r2.6AG1039990.1.CDS79.957873.4177
A4U43_C07F18400asparagus_officinalisONK6373887.442980.137lolium_perennecds.KYUSt_chr2.3463079.791773.125
A4U43_C07F18400asparagus_officinalisONK6373887.671279.9087oryza_brachyanthaOB02G39920.178.688571.7213
A4U43_C07F18400asparagus_officinalisONK6373887.899579.2237oryza_rufipogonORUFI02G34580.179.055471.2526
A4U43_C07F18400asparagus_officinalisONK6373887.899578.9954oryza_punctataOPUNC02G30390.178.893470.9016
A4U43_C07F18400asparagus_officinalisONK6373886.529779.6804avena_sativa_ot3098cds.AVESA.00001b.r3.6Dg0001348.178.794272.5572
A4U43_C07F18400asparagus_officinalisONK6373886.75879.6804avena_sativa_ot3098cds.AVESA.00001b.r3.6Cg0000653.179.331972.8601
A4U43_C07F18400asparagus_officinalisONK6373886.986379.9087secale_cerealeSECCE2Rv1G0132940.180.720374.1525
A4U43_C07F18400asparagus_officinalisONK6373834.703231.7352oryza_glaberrimaORGLA02G0284900.165.236159.6567
A4U43_C07F18400asparagus_officinalisONK6373853.65347.2603oryza_glaberrimaORGLA02G0284800.188.679278.1132
A4U43_C07F18400asparagus_officinalisONK6373887.899579.4521oryza_longistaminataKN539390.1_FGP01379.055471.4579
A4U43_C07F18400asparagus_officinalisONK6373887.442980.5936setaria_italicaKQL2367478.644872.4846
A4U43_C07F18400asparagus_officinalisONK6373887.214681.5069sorghum_bicolorKXG3515578.762973.6082
A4U43_C07F18400asparagus_officinalisONK6373888.127980.5936sorghum_bicolorEES0016979.423972.6337
A4U43_C07F18400asparagus_officinalisONK6373887.442980.5936setaria_viridisTKW3204578.644872.4846
A4U43_C07F18400asparagus_officinalisONK6373884.246673.516triticum_aestivumTraesCS5A02G372000.1.cds179.184569.0987
A4U43_C07F18400asparagus_officinalisONK6373884.703273.0594triticum_aestivumTraesCS5D02G381500.1.cds173.904463.745
A4U43_C07F18400asparagus_officinalisONK6373884.474973.7443triticum_aestivumTraesCS5B02G374100.1.cds173.852364.4711
A4U43_C07F18400asparagus_officinalisONK6373884.703277.8539triticum_aestivumTraesCS2B02G560200.187.294180.2353
A4U43_C07F18400asparagus_officinalisONK6373886.986379.9087triticum_aestivumTraesCS2D02G532700.174.559768.4931
A4U43_C07F18400asparagus_officinalisONK6373886.986379.6804triticum_aestivumTraesCS2A02G530800.179.874273.1656
A4U43_C07F18400asparagus_officinalisONK6373889.72681.9635ananas_comosusAco010198.1.mrna174.011367.6083
A4U43_C07F18400asparagus_officinalisONK6373886.986379.6804triticum_urartuTuG1812G0200005755.01.T0179.874273.1656
A4U43_C07F18400asparagus_officinalisONK6373877.853964.3836ipomoea_trilobaitb09g12340.t267.12655.5118
A4U43_C07F18400asparagus_officinalisONK6373878.310565.5251ipomoea_trilobaitb01g24440.t166.861655.9454
A4U43_C07F18400asparagus_officinalisONK6373887.899579.2237oryza_sativaOs02t0754700-0179.055471.2526
A4U43_C07F18400asparagus_officinalisONK6373853.424744.0639prunus_aviumPav_sc0000581.1_g010.1.mk:mrna63.934452.7322
A4U43_C07F18400asparagus_officinalisONK6373815.068512.5571prunus_aviumPav_sc0009757.1_g010.1.mk:mrna83.544369.6203
A4U43_C07F18400asparagus_officinalisONK6373886.301477.8539brachypodium_distachyonKQJ9166080.084772.2458
A4U43_C07F18400asparagus_officinalisONK6373882.648471.9178aegilops_tauschiiAET5Gv20871900.183.602872.7483
A4U43_C07F18400asparagus_officinalisONK6373886.529779.4521aegilops_tauschiiAET2Gv21169700.181.156374.5182
A4U43_C07F18400asparagus_officinalisONK6373828.310525.1142chenopodium_quinoaAUR62038498-RA:cds70.056562.1469
A4U43_C07F18400asparagus_officinalisONK6373876.48463.9269chenopodium_quinoaAUR62014241-RA:cds72.198360.3448
A4U43_C07F18400asparagus_officinalisONK6373849.315138.1279chenopodium_quinoaAUR62038499-RA:cds81.509463.0189
A4U43_C07F18400asparagus_officinalisONK6373878.538865.2968rosa_chinensisPRQ4361068.857.2
A4U43_C07F18400asparagus_officinalisONK6373879.908765.0685quercus_lobataQL07p043246:mrna69.721156.7729
A4U43_C07F18400asparagus_officinalisONK6373815.525111.4155quercus_lobataQL07p043269:mrna38.636428.4091
A4U43_C07F18400asparagus_officinalisONK6373813.24210.274quercus_lobataQL07p043256:mrna35.582827.6074
A4U43_C07F18400asparagus_officinalisONK6373886.986378.5388musa_acuminataMa03_p13660.176.268.8
A4U43_C07F18400asparagus_officinalisONK6373822.146115.9817olea_europaeaOE9A101423C162.580645.1613
A4U43_C07F18400asparagus_officinalisONK6373829.908725.1142olea_europaeaOE9A106285C149.063741.1985
A4U43_C07F18400asparagus_officinalisONK6373887.442979.6804panicum_halliiPUZ6971978.644871.6632
A4U43_C07F18400asparagus_officinalisONK6373875.799161.8721cynara_cardunculusKVI0950466.267554.0918
A4U43_C07F18400asparagus_officinalisONK6373878.995463.9269nymphaea_colorataNC12G0096770.1:cds69.338756.1122
A4U43_C07F18400asparagus_officinalisONK6373888.356277.6256dioscorea_rotundataDRNTG_32096.178.979669.3878
A4U43_C07F18400asparagus_officinalisONK6373884.474973.9726triticum_turgidumTRITD5Bv1G191340.173.852364.6707
A4U43_C07F18400asparagus_officinalisONK6373877.397361.8721arabidopsis_hallerig15862.t169.753155.7613
A4U43_C07F18400asparagus_officinalisONK6373877.16960.7306arabidopsis_hallerig29051.t169.547354.7325
A4U43_C07F18400asparagus_officinalisONK6373877.16960.7306eutrema_salsugineumESQ4356669.262354.5082
A4U43_C07F18400asparagus_officinalisONK6373878.310564.6119pistacia_veracds-EVM0012842.17057.7551
A4U43_C07F18400asparagus_officinalisONK6373887.899579.2237oryza_indicaBGIOSGA005601-PA79.055471.2526
A4U43_C07F18400asparagus_officinalisONK6373878.538864.8402kalanchoe_fedtschenkoiKaladp0037s0014.1.v1.167.187555.4688
A4U43_C07F18400asparagus_officinalisONK6373847.488644.2922saccharum_spontaneumSspon.02G0050470-1C-mRNA-1:cds90.829784.7162
A4U43_C07F18400asparagus_officinalisONK6373835.616431.7352saccharum_spontaneumSspon.02G0039750-1B-mRNA-1:cds57.564651.2915
A4U43_C07F18400asparagus_officinalisONK6373887.671281.0502saccharum_spontaneumSspon.03G0022370-1A-mRNA-1:cds79.012373.0453
A4U43_C07F18400asparagus_officinalisONK6373887.671281.0502saccharum_spontaneumSspon.03G0022370-2B-mRNA-1:cds76.341970.5765
A4U43_C07F18400asparagus_officinalisONK6373877.397363.242corymbia_citriodoracds-KAF8006051.166.863954.6351
A4U43_C07F18400asparagus_officinalisONK6373839.269431.9635citrus_clementinaESR4160955.663445.3074
A4U43_C07F18400asparagus_officinalisONK6373877.397364.3836fraxinus_excelsiorFRAEX38873_v2_000148640.2.cds69.753158.0247
A4U43_C07F18400asparagus_officinalisONK6373887.442979.9087echinochloa_crusgalliscaffold102.104.cds79.296172.4638
A4U43_C07F18400asparagus_officinalisONK6373888.127980.3653echinochloa_crusgalliscaffold121.228.cds64.333358.6667
A4U43_C07F18400asparagus_officinalisONK6373834.703230.5936echinochloa_crusgalliscaffold181.74.cds33.628329.646
A4U43_C07F18400asparagus_officinalisONK6373863.013746.8037ostreococcus_lucimarinusABO9884952.571439.0476
A4U43_C07F18400asparagus_officinalisONK6373867.351655.4795ostreococcus_lucimarinusABP0083472.839560
A4U43_C07F18400asparagus_officinalisONK6373885.388178.5388triticum_dicoccoidesTRIDC2BG080960.185.779878.8991
A4U43_C07F18400asparagus_officinalisONK6373884.246673.516triticum_dicoccoidesTRIDC5AG054380.179.184569.0987
A4U43_C07F18400asparagus_officinalisONK6373885.159878.0822triticum_dicoccoidesTRIDC2AG074290.184.772777.7273
A4U43_C07F18400asparagus_officinalisONK6373884.246672.831triticum_dicoccoidesTRIDC5BG058350.175.614865.3689
A4U43_C07F18400asparagus_officinalisONK6373878.995464.8402trifolium_pratenseTp57577_TGAC_v2_mRNA3391069.061956.6866
A4U43_C07F18400asparagus_officinalisONK6373876.712361.4155brassica_rapa_ro18A08p032350.1_BraROA.168.993855.2361
A4U43_C07F18400asparagus_officinalisONK6373887.899580.137leersia_perrieriLPERR02G27000.178.893471.9262
A4U43_C07F18400asparagus_officinalisONK6373874.200961.4155eucalyptus_grandisKCW4939280.445566.5842
A4U43_C07F18400asparagus_officinalisONK6373878.082264.6119actinidia_chinensisPSR9096371.101958.8358
A4U43_C07F18400asparagus_officinalisONK6373877.16961.6438brassica_oleraceaBo3g149290.169.262355.3279
A4U43_C07F18400asparagus_officinalisONK6373879.452167.1233vitis_viniferaVitvi08g00989_P00168.910958.2178
A4U43_C07F18400asparagus_officinalisONK6373877.397361.4155arabidopsis_lyratafgenesh2_kg.6__249__AT3G46100.169.753155.3498
A4U43_C07F18400asparagus_officinalisONK6373867.579955.0228arabidopsis_lyratascaffold_501493.166.968354.5249
A4U43_C07F18400asparagus_officinalisONK6373887.671278.9954oryza_barthiiOBART02G32930.178.850171.0472
A4U43_C07F18400asparagus_officinalisONK6373876.712360.5023camelina_sativaCsa06g019830.163.516150.0945
A4U43_C07F18400asparagus_officinalisONK6373876.712360.7306camelina_sativaCsa09g041180.168.154253.9554
A4U43_C07F18400asparagus_officinalisONK6373876.712361.1872camelina_sativaCsa04g028810.168.016254.251
A4U43_C07F18400asparagus_officinalisONK6373877.16961.6438daucus_carotaKZM9443969.262355.3279
A4U43_C07F18400asparagus_officinalisONK6373886.529778.0822eragrostis_curvulaTVU1063978.958371.25
A4U43_C07F18400asparagus_officinalisONK6373886.529778.0822eragrostis_curvulaTVU1069678.958371.25
A4U43_C07F18400asparagus_officinalisONK6373877.853964.1553coffea_canephoraCDP0956867.658755.754
A4U43_C07F18400asparagus_officinalisONK6373872.83157.0776selaginella_moellendorffiiEFJ1347475.413759.1017
A4U43_C07F18400asparagus_officinalisONK6373888.356280.8219zea_maysZm00001eb122020_P00179.793872.9897
A4U43_C07F18400asparagus_officinalisONK6373879.680466.21amborella_trichopodaERM9850369.660757.8842
A4U43_C07F18400asparagus_officinalisONK6373880.13765.5251quercus_subercds-POF08505.170.059957.2854
A4U43_C07F18400asparagus_officinalisONK6373815.753412.3288quercus_subercds-POF08504.139.884431.2139
A4U43_C07F18400asparagus_officinalisONK6373886.073177.8539eragrostis_tefEt_2A_015664.CDS78.541771.0417
A4U43_C07F18400asparagus_officinalisONK6373886.301478.3105eragrostis_tefEt_2B_019806.CDS78.7571.4583
A4U43_C07F18400asparagus_officinalisONK6373879.680466.21juglans_regiacds.Jr03_21100_p168.297556.7515
A4U43_C07F18400asparagus_officinalisONK6373887.899578.9954oryza_meridionalisOMERI02G31520.279.055471.0472
A4U43_C07F18400asparagus_officinalisONK6373879.452166.6667corylus_avellanaCav09g11230.t163.736353.4799
A4U43_C07F18400asparagus_officinalisONK6373878.995464.3836corchorus_capsularisOMO7242469.061956.2874
A4U43_C07F18400asparagus_officinalisONK6373878.995463.9269gossypium_raimondiiKJB1511968.650855.5556
A4U43_C07F18400asparagus_officinalisONK6373876.255760.0457chara_brauniiGBG8727043.320434.1115
A4U43_C07F18400asparagus_officinalisONK6373886.529779.2237hordeum_vulgareHORVU.MOREX.r3.2HG0207450.179.957873.2067
A4U43_C07F18400asparagus_officinalisONK6373884.931577.6256digitaria_exilisDexi1B01G0011280.1:cds69.14563.197
A4U43_C07F18400asparagus_officinalisONK6373887.214680.3653digitaria_exilisDexi1A01G0011850.1:cds79.583373.3333
A4U43_C07F18400asparagus_officinalisONK6373878.082263.9269vigna_radiataVradi03g03660.162.752351.3761
A4U43_C07F18400asparagus_officinalisONK6373887.899579.2237oryza_nivaraONIVA02G35070.179.055471.2526

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression