Description

Ensembl ID A4U43_C04F1560 Gene ID Accession -
Symbol Alias - Full Name uncharacterized protein
Status Confidence Length 19654 bases Strand Minus strand
Position 4 : 3894783 - 3914436 RNA binding domain DEAD , HA2 , OB_NTP_bind
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ONK70790 DEAD PF00270 2.8e-07 1
ONK70790 HA2 PF04408 2.1e-20 2
ONK70790 OB_NTP_bind PF07717 2.7e-16 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
A4U43_C04F1560asparagus_officinalisONK6675049.399429.8799asparagus_officinalisONK707903521.1702
A4U43_C04F1560asparagus_officinalisONK6475837.535823.3047asparagus_officinalisONK7079041.808525.9574
A4U43_C04F1560asparagus_officinalisONK6702233.618522.3268asparagus_officinalisONK7079041.808527.766
A4U43_C04F1560asparagus_officinalisONK6338329.790417.2904asparagus_officinalisONK7079042.340424.5745
A4U43_C04F1560asparagus_officinalisONK7560320.52911.5009asparagus_officinalisONK7079037.978721.2766
A4U43_C04F1560asparagus_officinalisONK7748639.622626.6612asparagus_officinalisONK7079051.38334.5745
A4U43_C04F1560asparagus_officinalisONK6599643.846228.0769asparagus_officinalisONK7079036.38323.2979
A4U43_C04F1560asparagus_officinalisONK5815754.464335.7143asparagus_officinalisONK707906.489364.25532
A4U43_C04F1560asparagus_officinalisONK6886954.995739.8784asparagus_officinalisONK7079067.340448.8298
A4U43_C04F1560asparagus_officinalisONK8141752.946138.1313asparagus_officinalisONK7079066.914948.1915
A4U43_C04F1560asparagus_officinalisONK6281426.023416.6667asparagus_officinalisONK707909.468096.06383
A4U43_C04F1560asparagus_officinalisONK7021141.813625.9446asparagus_officinalisONK7079017.659610.9574
A4U43_C04F1560asparagus_officinalisONK7021025.117415.0235asparagus_officinalisONK7079022.76613.617
A4U43_C04F1560asparagus_officinalisONK7444640.164627.2428asparagus_officinalisONK7079051.914935.2128
A4U43_C04F1560asparagus_officinalisONK6317750.894131.0867asparagus_officinalisONK7079039.361724.0426
A4U43_C04F1560asparagus_officinalisONK7774246.698128.6164asparagus_officinalisONK7079031.595719.3617

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
A4U43_C04F1560asparagus_officinalisONK7079058.191538.7234chlamydomonas_reinhardtiiPNW8510034.576523.0089
A4U43_C04F1560asparagus_officinalisONK7079060.212847.8723physcomitrium_patensPp3c17_19726V3.168.940354.8112
A4U43_C04F1560asparagus_officinalisONK7079036.063828.5106physcomitrium_patensPp3c17_19720V3.161.30248.4629
A4U43_C04F1560asparagus_officinalisONK7079081.489466.4894physcomitrium_patensPp3c14_12310V3.269.258656.5099
A4U43_C04F1560asparagus_officinalisONK7079053.829834.7872marchantia_polymorphaPTQ3733245.178629.1964
A4U43_C04F1560asparagus_officinalisONK7079087.23477.4468ficus_caricaFCD_00017328-RA:cds78.169769.3994
A4U43_C04F1560asparagus_officinalisONK7079086.595777.1277theobroma_cacaoEOY0849778.495769.9132
A4U43_C04F1560asparagus_officinalisONK7079085.851175.4255cucumis_meloMELO3C009546.2.175.561866.3858
A4U43_C04F1560asparagus_officinalisONK7079085.744774.7872cucumis_sativusKGN5921877.799267.8571
A4U43_C04F1560asparagus_officinalisONK7079086.595775.1064populus_trichocarpaPotri.016G068900.3.v4.178.723468.2785
A4U43_C04F1560asparagus_officinalisONK7079085.851173.5106brassica_napusCDX7964277.97166.7633
A4U43_C04F1560asparagus_officinalisONK7079085.957473.2979brassica_napusCDX8458878.067666.57
A4U43_C04F1560asparagus_officinalisONK7079085.957473.9362brassica_junceacds.BjuB08g43950S76.011365.381
A4U43_C04F1560asparagus_officinalisONK7079085.744773.4043brassica_junceacds.BjuA03g41220S78.252466.9903
A4U43_C04F1560asparagus_officinalisONK7079037.872332.5532prunus_dulcisVVA1537766.917357.5188
A4U43_C04F1560asparagus_officinalisONK7079035.319130.8511prunus_dulcisVVA1537990.958979.4521
A4U43_C04F1560asparagus_officinalisONK7079052.340446.8085cajanus_cajanC.cajan_11280.t88.489279.1367
A4U43_C04F1560asparagus_officinalisONK7079086.808576.1702malus_domestica_goldenmRNA:MD12G003550078.386268.78
A4U43_C04F1560asparagus_officinalisONK7079086.170275.9574phaseolus_vulgarisESW1777878.564569.2532
A4U43_C04F1560asparagus_officinalisONK7079086.489477.1277glycine_maxKRH3286078.93270.3884
A4U43_C04F1560asparagus_officinalisONK7079086.276676.9149vigna_unguiculataVigun07g015100.2.v1.278.737970.1942
A4U43_C04F1560asparagus_officinalisONK7079085.957476.5957vigna_angularisKOM3400178.446669.9029
A4U43_C04F1560asparagus_officinalisONK7079086.276676.0638capsicum_annuumPHT9548181.75472.0766
A4U43_C04F1560asparagus_officinalisONK7079085.531975.3191helianthus_annuusmRNA:HanXRQr2_Chr11g051165178.058368.7379
A4U43_C04F1560asparagus_officinalisONK7079079.680969.0426lactuca_sativacds-PLY82220.179.175568.6047
A4U43_C04F1560asparagus_officinalisONK7079079.361770.8511solanum_tuberosumPGSC0003DMT40005505887.353677.9859
A4U43_C04F1560asparagus_officinalisONK7079086.276676.2766solanum_lycopersicumSolyc01g006970.3.186.460676.4392
A4U43_C04F1560asparagus_officinalisONK7079088.936277.4468avena_sativa_sangAVESA.00010b.r2.1CG0096490.1.CDS81.16570.6796
A4U43_C04F1560asparagus_officinalisONK7079086.38375.5319lolium_perennecds.KYUSt_chr1.1712559.793852.2828
A4U43_C04F1560asparagus_officinalisONK7079088.829878.2979oryza_brachyanthaOB10G20180.189.114278.5486
A4U43_C04F1560asparagus_officinalisONK7079088.936277.4468avena_sativa_ot3098cds.AVESA.00001b.r3.1Cg0001014.280.230369.8656
A4U43_C04F1560asparagus_officinalisONK7079089.468179.1489secale_cerealeSECCE1Rv1G0024120.181.413472.0232
A4U43_C04F1560asparagus_officinalisONK7079082.021372.0213oryza_longistaminataKN538697.1_FGP05381.847171.8684
A4U43_C04F1560asparagus_officinalisONK7079088.297977.5532sorghum_bicolorKXG3835880.115870.3668
A4U43_C04F1560asparagus_officinalisONK7079089.574579.2553triticum_aestivumTraesCS1D02G148100.281.82772.4004
A4U43_C04F1560asparagus_officinalisONK7079089.680979.0426triticum_aestivumTraesCS1B02G168700.381.765372.066
A4U43_C04F1560asparagus_officinalisONK7079089.574579.2553triticum_aestivumTraesCS1A02G151100.181.82772.4004
A4U43_C04F1560asparagus_officinalisONK7079059.361740.8511homo_sapiensENSP0000041707855.357138.0952
A4U43_C04F1560asparagus_officinalisONK7079091.063883.5106ananas_comosusAco014577.1.mrna181.291574.5489
A4U43_C04F1560asparagus_officinalisONK7079089.574579.2553triticum_urartuTuG1812G0100001710.01.T0185.136575.3286
A4U43_C04F1560asparagus_officinalisONK7079086.702175.2128ipomoea_trilobaitb09g13940.t178.440868.0462
A4U43_C04F1560asparagus_officinalisONK7079053.510633.7234drosophila_melanogasterFBpp030714653.39733.6518
A4U43_C04F1560asparagus_officinalisONK7079082.553272.766prunus_aviumPav_sc0003201.1_g030.1.mk:mrna87.289176.9404
A4U43_C04F1560asparagus_officinalisONK7079089.042678.5106brachypodium_distachyonKQJ9704181.104771.5116
A4U43_C04F1560asparagus_officinalisONK7079089.361778.9362aegilops_tauschiiAET1Gv20382900.189.935879.4433
A4U43_C04F1560asparagus_officinalisONK7079083.085174.0426chenopodium_quinoaAUR62030726-RA:cds76.120967.8363
A4U43_C04F1560asparagus_officinalisONK7079086.063873.7234arabis_alpinaKFK3648580.969.3
A4U43_C04F1560asparagus_officinalisONK7079050.425544.2553rosa_chinensisPRQ4417188.268277.4674
A4U43_C04F1560asparagus_officinalisONK7079019.893618.1915rosa_chinensisPRQ4417087.793480.2817
A4U43_C04F1560asparagus_officinalisONK707908.829796.91489rosa_chinensisPRQ4416978.301961.3208
A4U43_C04F1560asparagus_officinalisONK7079086.063876.7021nicotiana_attenuataOIT1997678.088869.5946
A4U43_C04F1560asparagus_officinalisONK7079087.340479.2553quercus_lobataQL07p036411:mrna78.715271.4286
A4U43_C04F1560asparagus_officinalisONK7079090.638383.0851musa_acuminataMa08_p12340.148.853244.7821
A4U43_C04F1560asparagus_officinalisONK7079044.893640.7447cynara_cardunculusKVH7499871.768765.1361
A4U43_C04F1560asparagus_officinalisONK7079042.872337.766nymphaea_colorataNC1G0177120.1:cds89.555678.8889
A4U43_C04F1560asparagus_officinalisONK7079022.127719.2553dioscorea_rotundataDRNTG_30031.187.763776.3713
A4U43_C04F1560asparagus_officinalisONK707903532.5532dioscorea_rotundataDRNTG_30032.190.633684.2975
A4U43_C04F1560asparagus_officinalisONK7079089.680979.0426triticum_turgidumTRITD1Bv1G097620.481.765372.066
A4U43_C04F1560asparagus_officinalisONK7079089.574579.2553triticum_turgidumTRITD1Av1G092630.581.82772.4004
A4U43_C04F1560asparagus_officinalisONK7079086.170274.0426eutrema_salsugineumESQ5221580.677369.3227
A4U43_C04F1560asparagus_officinalisONK7079049.680943.8298pistacia_veracds-EVM0014792.193.027982.0717
A4U43_C04F1560asparagus_officinalisONK7079044.574539.6809pistacia_veracds-EVM0015240.192.087981.978
A4U43_C04F1560asparagus_officinalisONK7079027.76622.8723oryza_indicaBGIOSGA031705-PA68.324656.2827
A4U43_C04F1560asparagus_officinalisONK7079082.446872.0213oryza_indicaBGIOSGA031708-PA77.037867.2962
A4U43_C04F1560asparagus_officinalisONK7079085.212874.6809kalanchoe_fedtschenkoiKaladp0096s0138.1.v1.177.691668.0892
A4U43_C04F1560asparagus_officinalisONK7079088.191577.0213saccharum_spontaneumSspon.01G0019220-4D-mRNA-1:cds80.329570.155
A4U43_C04F1560asparagus_officinalisONK7079019.574515.6383saccharum_spontaneumSspon.01G0019220-1P-mRNA-1:cds84.792667.7419
A4U43_C04F1560asparagus_officinalisONK7079088.297977.3404saccharum_spontaneumSspon.01G0019220-3C-mRNA-1:cds81.372671.2745
A4U43_C04F1560asparagus_officinalisONK7079031.702128.7234saccharum_spontaneumSspon.01G0019220-2B-mRNA-1:cds90.030281.571
A4U43_C04F1560asparagus_officinalisONK7079085.531973.8298citrus_clementinaESR4329277.011566.4751
A4U43_C04F1560asparagus_officinalisONK7079089.574579.2553triticum_dicoccoidesTRIDC1AG022930.188.72578.5037
A4U43_C04F1560asparagus_officinalisONK7079089.680979.1489triticum_dicoccoidesTRIDC1BG027850.188.92478.481
A4U43_C04F1560asparagus_officinalisONK7079085.638373.4043brassica_rapa_ro18A03p020450.1_BraROA.178.079566.9253
A4U43_C04F1560asparagus_officinalisONK7079085.851173.5106brassica_oleraceaBo3g028690.177.97166.7633
A4U43_C04F1560asparagus_officinalisONK7079010.95748.61702vitis_viniferaVitvi14g00910_P00160.233947.3684
A4U43_C04F1560asparagus_officinalisONK7079085.957474.1489arabidopsis_lyratafgenesh2_kg.4__1622__AT2G35920.181.124569.9799
A4U43_C04F1560asparagus_officinalisONK7079086.276673.617camelina_sativaCsa05g018170.178.13166.6667
A4U43_C04F1560asparagus_officinalisONK7079085.531975.6383coffea_canephoraCDP1059076.064367.2658
A4U43_C04F1560asparagus_officinalisONK7079076.914961.4894selaginella_moellendorffiiEFJ1091577.326261.8182
A4U43_C04F1560asparagus_officinalisONK7079071.808557.8723selaginella_moellendorffiiEFJ2590079.411864
A4U43_C04F1560asparagus_officinalisONK7079014.148912.3404zea_maysZm00001eb178390_P00182.608772.0497
A4U43_C04F1560asparagus_officinalisONK707909.893628.51064zea_maysZm00001eb272370_P00186.915974.7664
A4U43_C04F1560asparagus_officinalisONK707902519.3617zea_maysZm00001eb302340_P00154.906542.5234
A4U43_C04F1560asparagus_officinalisONK707907.872347.76596zea_maysZm00001eb377170_P00198.666797.3333
A4U43_C04F1560asparagus_officinalisONK7079016.170213.1915zea_maysZm00001eb383390_P00168.778356.1086
A4U43_C04F1560asparagus_officinalisONK707909.893628.51064zea_maysZm00001eb134320_P00186.915974.7664
A4U43_C04F1560asparagus_officinalisONK7079052.76631.5957quercus_subercds-POF18559.134.420520.6107
A4U43_C04F1560asparagus_officinalisONK7079052.021330.4255quercus_subercds-POE89828.133.817419.7787
A4U43_C04F1560asparagus_officinalisONK7079083.61773.7234eragrostis_tefEt_1B_010835.CDS79.959370.4985
A4U43_C04F1560asparagus_officinalisONK7079010.63836.48936ciona_savignyiENSCSAVP0000001543557.803535.2601
A4U43_C04F1560asparagus_officinalisONK7079040.744735.1064corchorus_capsularisOMO4979475.245664.833
A4U43_C04F1560asparagus_officinalisONK7079045.319140.5319corchorus_capsularisOMO4978490.831681.2367
A4U43_C04F1560asparagus_officinalisONK7079072.446856.383chara_brauniiGBG8296261.076247.5336
A4U43_C04F1560asparagus_officinalisONK7079089.468179.1489hordeum_vulgareHORVU.MOREX.r3.1HG0041830.181.492272.093
A4U43_C04F1560asparagus_officinalisONK7079083.404373.7234digitaria_exilisDexi9B01G0020450.1:cds79.352270.1417
A4U43_C04F1560asparagus_officinalisONK7079078.61769.2553vigna_radiataVradi08g01180.171.33262.8378

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression