Description

Ensembl ID A4U43_C03F7300 Gene ID Accession -
Symbol Alias - Full Name uncharacterized protein
Status Confidence Length 34415 bases Strand Minus strand
Position 3 : 15783126 - 15817540 RNA binding domain Ribonucleas_3_3 , PAZ , Ribonuclease_3
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ONK74528 Ribonucleas_3_3 PF14622 1.2e-24 1
ONK74528 PAZ PF02170 8.2e-19 2
ONK74528 Ribonuclease_3 PF00636 8.2e-46 3
ONK74528 Ribonuclease_3 PF00636 8.2e-46 4

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
A4U43_C03F7300asparagus_officinalisONK7369724.683518.3544asparagus_officinalisONK7452811.50448.55457
A4U43_C03F7300asparagus_officinalisONK5671239.127829.0541asparagus_officinalisONK7452862.635246.5093
A4U43_C03F7300asparagus_officinalisONK6668324.329510.3448asparagus_officinalisONK7452812.48775.30973
A4U43_C03F7300asparagus_officinalisONK7040926.890216.7073asparagus_officinalisONK7452843.362826.942
A4U43_C03F7300asparagus_officinalisONK7376643.272725.8182asparagus_officinalisONK7452811.70116.98132
A4U43_C03F7300asparagus_officinalisONK8147835.621.2asparagus_officinalisONK745288.751235.21141
A4U43_C03F7300asparagus_officinalisONK6717128.450115.0743asparagus_officinalisONK7452813.1766.98132
A4U43_C03F7300asparagus_officinalisONK5871525.457217.0446asparagus_officinalisONK7452834.218322.9105
A4U43_C03F7300asparagus_officinalisONK6379620.769211.9231asparagus_officinalisONK745285.309733.04818
A4U43_C03F7300asparagus_officinalisONK5584222.673714.9588asparagus_officinalisONK7452837.856424.9754

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
A4U43_C03F7300asparagus_officinalisONK7452818.68249.3412chondrus_crispusCDF3454810.70425.35211
A4U43_C03F7300asparagus_officinalisONK7452818.190810.7178chondrus_crispusCDF3699912.85617.5747
A4U43_C03F7300asparagus_officinalisONK7452817.20759.53786chlamydomonas_reinhardtiiPNW875657.826484.3381
A4U43_C03F7300asparagus_officinalisONK7452819.76410.5211chlamydomonas_reinhardtiiPNW811874.936152.6277
A4U43_C03F7300asparagus_officinalisONK7452846.607731.1701marchantia_polymorphaPTQ3129727.116718.135
A4U43_C03F7300asparagus_officinalisONK7452830.285222.7139ficus_caricaFCD_00003835-RA:cds33.661225.2459
A4U43_C03F7300asparagus_officinalisONK7452862.831946.3127beta_vulgarisKMS9535466.217648.8083
A4U43_C03F7300asparagus_officinalisONK7452863.716849.1642citrullus_lanatusCla97C08G152540.139.4430.4321
A4U43_C03F7300asparagus_officinalisONK7452858.800445.4277cucumis_meloMELO3C011495.2.138.705529.9029
A4U43_C03F7300asparagus_officinalisONK7452864.601850.0492cucumis_sativusKGN4757540.036631.0177
A4U43_C03F7300asparagus_officinalisONK7452859.095444.4444arabidopsis_thalianaAT3G43920.238.03828.6076
A4U43_C03F7300asparagus_officinalisONK7452856.932242.7729brassica_napusCDY3094245.915934.4964
A4U43_C03F7300asparagus_officinalisONK7452857.817143.6578brassica_napusCDY2122338.406329.0007
A4U43_C03F7300asparagus_officinalisONK7452857.718843.8545brassica_junceacds.BjuB06g35130S38.491829.2459
A4U43_C03F7300asparagus_officinalisONK7452861.455347.8859prunus_persicaONH9289236.252928.2483
A4U43_C03F7300asparagus_officinalisONK7452861.258648.0826prunus_dulcisVVA1582737.127529.1418
A4U43_C03F7300asparagus_officinalisONK7452858.603744.0511cajanus_cajanC.cajan_29114.t38.377328.8474
A4U43_C03F7300asparagus_officinalisONK7452863.520248.6726malus_domestica_goldenmRNA:MD15G004160038.72929.6763
A4U43_C03F7300asparagus_officinalisONK7452859.58746.116malus_domestica_goldenmRNA:MD10G013890035.438627.4269
A4U43_C03F7300asparagus_officinalisONK7452861.061946.2144medicago_truncatulaAES7348735.89627.1676
A4U43_C03F7300asparagus_officinalisONK7452819.075714.6509lupinus_angustifoliusOIV8909762.580648.0645
A4U43_C03F7300asparagus_officinalisONK7452856.047242.1829lupinus_angustifoliusOIW1495635.916827.0321
A4U43_C03F7300asparagus_officinalisONK7452862.438548.6726phaseolus_vulgarisESW0889738.092429.6941
A4U43_C03F7300asparagus_officinalisONK7452862.930248.0826glycine_maxKRH6160538.231829.2115
A4U43_C03F7300asparagus_officinalisONK7452860.963646.706pisum_sativumPsat5g034960.1.cds37.462228.7009
A4U43_C03F7300asparagus_officinalisONK7452860.078744.8378vigna_angularisKOM4210147.145135.1852
A4U43_C03F7300asparagus_officinalisONK745286.293023.73648capsicum_annuumPHT7436116.886510.0264
A4U43_C03F7300asparagus_officinalisONK7452856.735543.3628helianthus_annuusmRNA:HanXRQr2_Chr13g058342145.361634.6698
A4U43_C03F7300asparagus_officinalisONK7452857.423843.8545helianthus_annuusmRNA:HanXRQr2_Chr05g019973142.941232.7941
A4U43_C03F7300asparagus_officinalisONK7452859.193744.1495lactuca_sativacds-PLY65301.136.330727.0972
A4U43_C03F7300asparagus_officinalisONK7452859.783744.5428lactuca_sativacds-PLY65313.137.438427.8941
A4U43_C03F7300asparagus_officinalisONK7452863.618548.5742solanum_lycopersicumSolyc08g067210.3.133.998925.959
A4U43_C03F7300asparagus_officinalisONK7452821.337311.7994homo_sapiensENSP0000034374511.29036.2435
A4U43_C03F7300asparagus_officinalisONK7452859.783745.5261ipomoea_trilobaitb14g03150.t137.670428.6865
A4U43_C03F7300asparagus_officinalisONK7452821.632312.7827drosophila_melanogasterFBpp00837179.782135.78035
A4U43_C03F7300asparagus_officinalisONK7452861.455348.3776prunus_aviumPav_sc0001963.1_g520.1.mk:mrna35.551827.9863
A4U43_C03F7300asparagus_officinalisONK7452865.191749.3609chenopodium_quinoaAUR62036713-RA:cds41.12931.1414
A4U43_C03F7300asparagus_officinalisONK7452864.503448.7709chenopodium_quinoaAUR62013883-RA:cds66.195850.0505
A4U43_C03F7300asparagus_officinalisONK7452856.833842.5762arabis_alpinaKFK4483446.801635.0607
A4U43_C03F7300asparagus_officinalisONK7452858.308844.3461arabis_alpinaKFK3231738.159629.0219
A4U43_C03F7300asparagus_officinalisONK7452862.930249.2625rosa_chinensisPRQ2807539.384630.8308
A4U43_C03F7300asparagus_officinalisONK7452861.946947.3943olea_europaeaOE9A086034C136.885228.2201
A4U43_C03F7300asparagus_officinalisONK7452856.342242.2812nymphaea_colorataNC3G0224940.1:cds38.53428.9173
A4U43_C03F7300asparagus_officinalisONK7452858.210443.3628nymphaea_colorataNC3G0205240.1:cds37.326627.8058
A4U43_C03F7300asparagus_officinalisONK7452857.423843.4612arabidopsis_hallerig29309.t137.173828.1349
A4U43_C03F7300asparagus_officinalisONK7452858.308844.1495arabidopsis_hallerig31186.t237.84328.6535
A4U43_C03F7300asparagus_officinalisONK745285.408063.44149arabidopsis_hallerig30576.t18.899685.66343
A4U43_C03F7300asparagus_officinalisONK7452858.013843.6578eutrema_salsugineumESQ4597437.365428.1191
A4U43_C03F7300asparagus_officinalisONK7452862.438549.9508citrus_clementinaESR6619138.41530.732
A4U43_C03F7300asparagus_officinalisONK7452822.418912.0944caenorhabditis_elegansK12H4.8.111.93726.43979
A4U43_C03F7300asparagus_officinalisONK7452860.963645.9194trifolium_pratenseTp57577_TGAC_v2_mRNA367436.088527.1828
A4U43_C03F7300asparagus_officinalisONK7452857.030543.1662brassica_rapa_ro18A06p032270.1_BraROA.142.741332.3508
A4U43_C03F7300asparagus_officinalisONK7452862.733547.8859eucalyptus_grandisKCW8181737.976228.9881
A4U43_C03F7300asparagus_officinalisONK7452817.305812.9794actinidia_chinensisPSS1756853.01239.759
A4U43_C03F7300asparagus_officinalisONK7452857.817143.4612brassica_oleraceaBo3g123560.138.082928.6269
A4U43_C03F7300asparagus_officinalisONK7452858.308844.3461arabidopsis_lyratafgenesh2_kg.5__816__AT3G43920.138.987529.6515
A4U43_C03F7300asparagus_officinalisONK7452857.718843.2645camelina_sativaCsa06g016650.141.928631.4286
A4U43_C03F7300asparagus_officinalisONK7452857.817142.8712camelina_sativaCsa09g063020.134.486825.5718
A4U43_C03F7300asparagus_officinalisONK7452858.112143.5595camelina_sativaCsa04g022680.137.763628.3067
A4U43_C03F7300asparagus_officinalisONK7452861.061948.0826daucus_carotaKZN1171537.409629.4578
A4U43_C03F7300asparagus_officinalisONK7452860.570346.116daucus_carotaKZN0817836.342227.6696
A4U43_C03F7300asparagus_officinalisONK7452838.053125.0737selaginella_moellendorffiiEFJ2955230.836720.3187
A4U43_C03F7300asparagus_officinalisONK7452841.199628.7119selaginella_moellendorffiiEFJ0743824.374616.9866
A4U43_C03F7300asparagus_officinalisONK7452838.151425.1721selaginella_moellendorffiiEFJ3877230.054219.8296
A4U43_C03F7300asparagus_officinalisONK7452836.774825.4671selaginella_moellendorffiiEFJ2000022.182715.3618
A4U43_C03F7300asparagus_officinalisONK7452815.339210.4228quercus_subercds-POE58512.146.290831.454
A4U43_C03F7300asparagus_officinalisONK7452841.691231.8584quercus_subercds-POE54062.131.176523.8235
A4U43_C03F7300asparagus_officinalisONK7452821.730615.3392quercus_subercds-POF01597.146.331232.7044
A4U43_C03F7300asparagus_officinalisONK7452841.002931.4651quercus_subercds-POF06045.160.787246.6472
A4U43_C03F7300asparagus_officinalisONK7452864.700151.5241juglans_regiacds.Jr05_05420_p139.614731.5473
A4U43_C03F7300asparagus_officinalisONK7452838.446431.9567corylus_avellanaCav01g35340.t148.212140.074
A4U43_C03F7300asparagus_officinalisONK7452826.64718.0924corylus_avellanaCav01g35330.t122.811415.4882
A4U43_C03F7300asparagus_officinalisONK7452818.38749.04621ciona_savignyiENSCSAVP0000001041315.30287.52864
A4U43_C03F7300asparagus_officinalisONK7452855.063941.2979gossypium_raimondiiKJB8294438.303728.7278
A4U43_C03F7300asparagus_officinalisONK7452863.028549.4592gossypium_raimondiiKJB6539638.268730.0299
A4U43_C03F7300asparagus_officinalisONK745281.573251.27827chara_brauniiGBG819136.666675.41667
A4U43_C03F7300asparagus_officinalisONK7452860.275345.821vigna_radiataVradi05g11300.136.553427.7877

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression