Description

Ensembl ID A4U43_C03F29350 Gene ID Accession -
Symbol Alias - Full Name uncharacterized protein
Status Confidence Length 41021 bases Strand Minus strand
Position 3 : 102795887 - 102836907 RNA binding domain SUV3_C
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ONK76542 SUV3_C PF12513 3.2e-17 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
A4U43_C03F29350asparagus_officinalisONK7544138.797818.5792asparagus_officinalisONK7654212.1165.80205
A4U43_C03F29350asparagus_officinalisONK7544246.401532.5758asparagus_officinalisONK7654241.808929.3515

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
A4U43_C03F29350asparagus_officinalisONK7654275.25665.0171papaver_somniferumRZC8082783.207671.8868
A4U43_C03F29350asparagus_officinalisONK7654239.419833.2765papaver_somniferumRZC5229375.986864.1447
A4U43_C03F29350asparagus_officinalisONK7654276.279965.6997cannabis_sativa_femalecds.evm.model.07.111177.202166.494
A4U43_C03F29350asparagus_officinalisONK7654265.870354.0956ficus_caricaFCD_00009272-RA:cds76.587362.8968
A4U43_C03F29350asparagus_officinalisONK7654276.279965.529beta_vulgarisKMS9763179.255368.0851
A4U43_C03F29350asparagus_officinalisONK7654274.402763.6519citrullus_lanatusCla97C05G086120.178.842767.4503
A4U43_C03F29350asparagus_officinalisONK7654276.962566.7235theobroma_cacaoEOY0574878.984268.4764
A4U43_C03F29350asparagus_officinalisONK7654272.696261.6041cucumis_meloMELO3C006514.2.176.344164.6953
A4U43_C03F29350asparagus_officinalisONK7654272.866962.2867cucumis_sativusKGN5695876.2565.1786
A4U43_C03F29350asparagus_officinalisONK7654274.914765.0171populus_trichocarpaPotri.010G084100.1.v4.176.882766.725
A4U43_C03F29350asparagus_officinalisONK7654272.184359.3857arabidopsis_thalianaAT4G14790.174.080660.9457
A4U43_C03F29350asparagus_officinalisONK7654270.989857.3379brassica_napusCDY4279069.333356
A4U43_C03F29350asparagus_officinalisONK7654270.819157.1672brassica_napusCDY2977370.698557.0698
A4U43_C03F29350asparagus_officinalisONK7654276.109266.7235prunus_persicaONI2633478.245668.5965
A4U43_C03F29350asparagus_officinalisONK7654276.450566.3823prunus_dulcisVVA2095078.596568.2456
A4U43_C03F29350asparagus_officinalisONK7654275.25665.529cajanus_cajanC.cajan_24112.t75.384665.641
A4U43_C03F29350asparagus_officinalisONK7654233.617727.9863malus_domestica_goldenmRNA:MD16G017440066.107455.0336
A4U43_C03F29350asparagus_officinalisONK7654274.914765.6997malus_domestica_goldenmRNA:MD13G017390072.442263.5314
A4U43_C03F29350asparagus_officinalisONK7654275.597364.5051medicago_truncatulaAES9371577.719366.3158
A4U43_C03F29350asparagus_officinalisONK7654270.136559.5563lupinus_angustifoliusOIV9498778.435166.6031
A4U43_C03F29350asparagus_officinalisONK7654274.914766.041phaseolus_vulgarisESW2910077.561868.3746
A4U43_C03F29350asparagus_officinalisONK7654276.279965.6997glycine_maxKRH2766879.11568.1416
A4U43_C03F29350asparagus_officinalisONK7654275.426665.6997glycine_maxKRH7782378.230168.1416
A4U43_C03F29350asparagus_officinalisONK7654276.279965.0171pisum_sativumPsat2g190360.2.cds77.06965.6897
A4U43_C03F29350asparagus_officinalisONK7654276.109265.8703vigna_unguiculataVigun02g192700.2.v1.270.458160.9795
A4U43_C03F29350asparagus_officinalisONK7654274.914766.041vigna_angularisKOM2759377.561868.3746
A4U43_C03F29350asparagus_officinalisONK7654266.552955.6314sesamum_indicumSIN_1021874.t80.578567.3554
A4U43_C03F29350asparagus_officinalisONK7654275.25664.6758capsicum_annuumPHT8589582.276170.709
A4U43_C03F29350asparagus_officinalisONK7654274.914763.4812helianthus_annuusmRNA:HanXRQr2_Chr17g082313180.847168.5083
A4U43_C03F29350asparagus_officinalisONK7654274.914763.9932lactuca_sativacds-PLY83662.182.209770.2247
A4U43_C03F29350asparagus_officinalisONK7654274.914763.4812solanum_lycopersicumSolyc09g082380.3.181.90369.403
A4U43_C03F29350asparagus_officinalisONK7654276.962567.0648manihot_esculentaOAY5572478.984268.8266
A4U43_C03F29350asparagus_officinalisONK7654277.133166.5529avena_sativa_sangAVESA.00010b.r2.4AG0606890.1.CDS78.883168.0628
A4U43_C03F29350asparagus_officinalisONK7654277.303866.3823avena_sativa_sangAVESA.00010b.r2.7CG0702480.1.CDS79.057667.8883
A4U43_C03F29350asparagus_officinalisONK7654277.303866.5529avena_sativa_sangAVESA.00010b.r2.4DG0750450.2.CDS77.435966.6667
A4U43_C03F29350asparagus_officinalisONK7654245.733840.1024lolium_perennecds.KYUSt_chr4.1026279.289969.5266
A4U43_C03F29350asparagus_officinalisONK7654278.327666.8942oryza_brachyanthaOB03G40960.179.411867.8201
A4U43_C03F29350asparagus_officinalisONK7654268.94259.727oryza_rufipogonORUFI03G35380.172.142962.5
A4U43_C03F29350asparagus_officinalisONK7654271.160461.4334oryza_punctataOPUNC03G31070.178.089967.4157
A4U43_C03F29350asparagus_officinalisONK7654277.303866.3823avena_sativa_ot3098cds.AVESA.00001b.r3.7Cg0000798.379.057667.8883
A4U43_C03F29350asparagus_officinalisONK7654277.133166.5529avena_sativa_ot3098cds.AVESA.00001b.r3.4Ag0001509.178.883168.0628
A4U43_C03F29350asparagus_officinalisONK7654277.303866.5529avena_sativa_ot3098cds.AVESA.00001b.r3.4Dg0001840.177.435966.6667
A4U43_C03F29350asparagus_officinalisONK7654276.621265.8703secale_cerealeSECCE5Rv1G0352330.178.08767.1304
A4U43_C03F29350asparagus_officinalisONK7654276.962566.3823oryza_glaberrimaORGLA03G0310000.177.892967.1848
A4U43_C03F29350asparagus_officinalisONK7654265.187756.1433oryza_longistaminataKN538684.1_FGP18964.201755.2941
A4U43_C03F29350asparagus_officinalisONK7654276.791866.7235setaria_italicaKQK8713583.333372.4074
A4U43_C03F29350asparagus_officinalisONK7654278.668967.5768sorghum_bicolorOQU9100472.712962.4606
A4U43_C03F29350asparagus_officinalisONK7654237.030732.2526setaria_viridisTKW0910488.934477.459
A4U43_C03F29350asparagus_officinalisONK7654277.815766.7235setaria_viridisTKV9139479.166767.8819
A4U43_C03F29350asparagus_officinalisONK7654276.621265.0171triticum_aestivumTraesCS5A02G384500.178.359566.4921
A4U43_C03F29350asparagus_officinalisONK7654276.962565.1877triticum_aestivumTraesCS5B02G389300.178.708566.6667
A4U43_C03F29350asparagus_officinalisONK7654276.621264.8464triticum_aestivumTraesCS5D02G394100.178.359566.3176
A4U43_C03F29350asparagus_officinalisONK7654275.426666.2116ananas_comosusAco009695.1.mrna181.549871.5867
A4U43_C03F29350asparagus_officinalisONK7654276.621265.0171triticum_urartuTuG1812G0500004137.01.T0178.359566.4921
A4U43_C03F29350asparagus_officinalisONK7654270.989861.0922oryza_glumipatulaOGLUM03G33640.177.902667.0412
A4U43_C03F29350asparagus_officinalisONK7654275.767963.4812ipomoea_trilobaitb04g14810.t271.961160.2917
A4U43_C03F29350asparagus_officinalisONK7654276.962566.2116oryza_sativaOs03t0746500-0177.892967.0121
A4U43_C03F29350asparagus_officinalisONK7654275.767966.3823prunus_aviumPav_sc0001539.1_g340.1.mk:mrna71.844762.945
A4U43_C03F29350asparagus_officinalisONK7654276.450565.8703brachypodium_distachyonPNT7414582.96371.4815
A4U43_C03F29350asparagus_officinalisONK7654245.733838.9078aegilops_tauschiiAET5Gv20897000.973.829262.8099
A4U43_C03F29350asparagus_officinalisONK7654239.931732.0819chenopodium_quinoaAUR62034732-RA:cds66.666753.5613
A4U43_C03F29350asparagus_officinalisONK7654240.614332.0819chenopodium_quinoaAUR62033652-RA:cds81.228764.1638
A4U43_C03F29350asparagus_officinalisONK7654243.003434.6416chenopodium_quinoaAUR62042447-RA:cds64.122151.6539
A4U43_C03F29350asparagus_officinalisONK7654222.696218.0887chenopodium_quinoaAUR62033655-RA:cds68.911954.9223
A4U43_C03F29350asparagus_officinalisONK7654270.989858.7031arabis_alpinaKFK4374172.982560.3509
A4U43_C03F29350asparagus_officinalisONK7654274.914765.0171rosa_chinensisPRQ3598076.748366.6084
A4U43_C03F29350asparagus_officinalisONK7654222.184318.6007rosa_chinensisPRQ5522775.581463.3721
A4U43_C03F29350asparagus_officinalisONK7654239.931735.3242quercus_lobataQL06p001588:mrna82.105372.6316
A4U43_C03F29350asparagus_officinalisONK7654234.129730.0341quercus_lobataQL06p001595:mrna72.463863.7681
A4U43_C03F29350asparagus_officinalisONK7654279.180969.7952musa_acuminataMa07_p27290.480.695771.1304
A4U43_C03F29350asparagus_officinalisONK7654219.453916.8942olea_europaeaOE9A003632C167.857158.9286
A4U43_C03F29350asparagus_officinalisONK7654262.62849.8294olea_europaeaOE9A057160C139.001131.0308
A4U43_C03F29350asparagus_officinalisONK7654259.897649.8294olea_europaeaOE9A010555C144.884937.3402
A4U43_C03F29350asparagus_officinalisONK7654277.986466.2116panicum_halliiPUZ3706479.065767.128
A4U43_C03F29350asparagus_officinalisONK7654275.426663.9932cynara_cardunculusKVH9736278.230166.3717
A4U43_C03F29350asparagus_officinalisONK7654274.061463.9932nymphaea_colorataNC1G0107110.1:cds72.696862.8141
A4U43_C03F29350asparagus_officinalisONK7654240.614335.8362dioscorea_rotundataDRNTG_20877.180.67871.1864
A4U43_C03F29350asparagus_officinalisONK7654213.481210.9215dioscorea_rotundataDRNTG_20879.165.833353.3333
A4U43_C03F29350asparagus_officinalisONK7654276.621265.0171triticum_turgidumTRITD5Bv1G198110.378.22366.3763
A4U43_C03F29350asparagus_officinalisONK7654270.307257.6792triticum_turgidumTRITD5Av1G202650.266.774754.7812
A4U43_C03F29350asparagus_officinalisONK7654271.501758.5324arabidopsis_hallerig20119.t173.63860.2812
A4U43_C03F29350asparagus_officinalisONK7654254.607543.686eutrema_salsugineumESQ5609378.817763.0542
A4U43_C03F29350asparagus_officinalisONK7654219.965915.8703pistacia_veracds-EVM0008113.17559.6154
A4U43_C03F29350asparagus_officinalisONK7654265.699758.0205pistacia_veracds-EVM0006286.176.237667.3267
A4U43_C03F29350asparagus_officinalisONK7654265.699756.1433oryza_indicaBGIOSGA009822-PA61.305752.3885
A4U43_C03F29350asparagus_officinalisONK7654274.232161.9454kalanchoe_fedtschenkoiKaladp0926s0027.1.v1.176.182163.5727
A4U43_C03F29350asparagus_officinalisONK7654225.767923.2082saccharum_spontaneumSspon.01G0061530-1D-mRNA-1:cds85.795577.2727
A4U43_C03F29350asparagus_officinalisONK7654274.402762.116corymbia_citriodoracds-KAF8037791.175.694463.1944
A4U43_C03F29350asparagus_officinalisONK7654275.426666.2116citrus_clementinaESR3323278.368868.7943
A4U43_C03F29350asparagus_officinalisONK7654257.679249.4881fraxinus_excelsiorFRAEX38873_v2_000325790.2.cds77.701166.6667
A4U43_C03F29350asparagus_officinalisONK7654219.965916.041fraxinus_excelsiorFRAEX38873_v2_000283760.2.cds78.523563.0872
A4U43_C03F29350asparagus_officinalisONK7654266.04158.0205echinochloa_crusgalliscaffold35.158.cds83.405273.2759
A4U43_C03F29350asparagus_officinalisONK7654272.013661.6041echinochloa_crusgalliscaffold3.1144.cds77.289466.1172
A4U43_C03F29350asparagus_officinalisONK7654253.583646.2457echinochloa_crusgalliscaffold160.87.cds75.299864.988
A4U43_C03F29350asparagus_officinalisONK7654273.549564.1638echinochloa_crusgalliscaffold20.966.cds85.346574.4554
A4U43_C03F29350asparagus_officinalisONK7654215.870314.5051echinochloa_crusgalliscaffold82.133.cds85.321177.9817
A4U43_C03F29350asparagus_officinalisONK7654276.962565.1877triticum_dicoccoidesTRIDC5BG060290.1178.708566.6667
A4U43_C03F29350asparagus_officinalisONK7654275.767964.8464trifolium_pratenseTp57577_TGAC_v2_mRNA3916378.031666.7838
A4U43_C03F29350asparagus_officinalisONK7654270.989857.5085brassica_rapa_ro18A01p024810.1_BraROA.170.868857.4106
A4U43_C03F29350asparagus_officinalisONK7654267.747459.0444leersia_perrieriLPERR03G28460.178.926468.7873
A4U43_C03F29350asparagus_officinalisONK7654275.25662.2867eucalyptus_grandisKCW8418976.562563.3681
A4U43_C03F29350asparagus_officinalisONK7654271.501758.0205brassica_oleraceaBo1g057410.166.402553.8827
A4U43_C03F29350asparagus_officinalisONK7654276.621265.6997vitis_viniferaVitvi05g00534_P00179.049367.7817
A4U43_C03F29350asparagus_officinalisONK7654271.331158.3618arabidopsis_lyrataAl_scaffold_0007_282573.462260.1054
A4U43_C03F29350asparagus_officinalisONK7654268.771359.727oryza_barthiiOBART03G33980.171.964362.5
A4U43_C03F29350asparagus_officinalisONK7654270.819158.5324camelina_sativaCsa12g056870.172.80760.1754
A4U43_C03F29350asparagus_officinalisONK7654270.477858.5324camelina_sativaCsa10g031590.172.456160.1754
A4U43_C03F29350asparagus_officinalisONK7654270.648558.5324camelina_sativaCsa11g037070.172.631660.1754
A4U43_C03F29350asparagus_officinalisONK7654244.368638.5666daucus_carotaKZM8704374.285764.5714
A4U43_C03F29350asparagus_officinalisONK7654258.703149.8294eragrostis_curvulaTVU4505865.648955.7252
A4U43_C03F29350asparagus_officinalisONK7654277.645166.7235coffea_canephoraCDO9908972.567862.3604
A4U43_C03F29350asparagus_officinalisONK7654256.996644.3686selaginella_moellendorffiiEFJ1780469.583354.1667
A4U43_C03F29350asparagus_officinalisONK7654256.996644.3686selaginella_moellendorffiiEFJ1633069.583354.1667
A4U43_C03F29350asparagus_officinalisONK7654235.153623.3788selaginella_moellendorffiiEFJ1526234.621823.0252
A4U43_C03F29350asparagus_officinalisONK7654278.839667.5768zea_maysZm00001eb057040_P00180.069368.6309
A4U43_C03F29350asparagus_officinalisONK7654272.525663.4812amborella_trichopodaERN0157381.417671.2644
A4U43_C03F29350asparagus_officinalisONK7654220.477817.4061quercus_subercds-POF16718.168.571458.2857
A4U43_C03F29350asparagus_officinalisONK7654253.41334.9829galdieria_sulphurariaEME3136144.714329.2857
A4U43_C03F29350asparagus_officinalisONK7654272.866961.6041eragrostis_tefEt_4B_037930.CDS79.220866.9759
A4U43_C03F29350asparagus_officinalisONK7654272.525661.6041eragrostis_tefEt_4A_033777.CDS79.29167.3507
A4U43_C03F29350asparagus_officinalisONK7654276.791867.5768juglans_regiacds.Jr07_24890_p179.365169.8413
A4U43_C03F29350asparagus_officinalisONK7654269.795261.0922juglans_regiacds.Jr07_24900_p179.417569.5146
A4U43_C03F29350asparagus_officinalisONK7654261.945451.5358oryza_meridionalisOMERI03G31170.176.260563.4454
A4U43_C03F29350asparagus_officinalisONK7654261.604154.4369corylus_avellanaCav04g12140.t171.769463.4195
A4U43_C03F29350asparagus_officinalisONK7654220.307217.4061corylus_avellanaCav04g12150.t166.480456.9832
A4U43_C03F29350asparagus_officinalisONK7654217.918111.2628ciona_savignyiENSCSAVP0000000693847.945230.137
A4U43_C03F29350asparagus_officinalisONK7654276.962566.3823corchorus_capsularisOMO5463778.984268.1261
A4U43_C03F29350asparagus_officinalisONK7654275.938664.3345gossypium_raimondiiKJB3818679.040966.9627
A4U43_C03F29350asparagus_officinalisONK7654276.962565.6997hordeum_vulgareHORVU.MOREX.r3.5HG0510090.178.708567.1902
A4U43_C03F29350asparagus_officinalisONK7654268.088759.727vigna_radiataVradi11g00830.172.943363.9854
A4U43_C03F29350asparagus_officinalisONK7654270.819161.2628oryza_nivaraONIVA03G35270.177.715467.2285

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression