Description

Ensembl ID A4U43_C03F26540 Gene ID Accession -
Symbol Alias - Full Name uncharacterized protein
Status Confidence Length 2977 bases Strand Plus strand
Position 3 : 86658949 - 86661925 RNA binding domain Ribosomal_L13
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ONK76337 Ribosomal_L13 PF00572 4e-23 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
A4U43_C03F26540asparagus_officinalisONK6470269.565264.1304asparagus_officinalisONK7633762.135957.2816
A4U43_C03F26540asparagus_officinalisONK8196927.916715.4167asparagus_officinalisONK7633732.524317.9612

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
A4U43_C03F26540asparagus_officinalisONK7633766.019448.0583chondrus_crispusCDF3481768.686950
A4U43_C03F26540asparagus_officinalisONK7633767.475755.8252chlamydomonas_reinhardtiiPNW7558380.346866.474
A4U43_C03F26540asparagus_officinalisONK7633788.83578.6408physcomitrium_patensPp3c11_17280V3.287.980877.8846
A4U43_C03F26540asparagus_officinalisONK7633788.349579.6116physcomitrium_patensPp3c19_10330V3.187.578.8462
A4U43_C03F26540asparagus_officinalisONK7633788.349578.6408physcomitrium_patensPp3c2_20550V3.287.577.8846
A4U43_C03F26540asparagus_officinalisONK7633789.320479.6116physcomitrium_patensPp3c1_15830V3.188.461578.8462
A4U43_C03F26540asparagus_officinalisONK7633789.320479.6116physcomitrium_patensPp3c7_12270V3.188.461578.8462
A4U43_C03F26540asparagus_officinalisONK7633788.349579.1262marchantia_polymorphaPTQ3793185.849176.8868
A4U43_C03F26540asparagus_officinalisONK7633787.864179.1262marchantia_polymorphaPTQ4536586.602977.9904
A4U43_C03F26540asparagus_officinalisONK7633745.145636.8932papaver_somniferumRZC7043852.840943.1818
A4U43_C03F26540asparagus_officinalisONK7633733.980630.0971papaver_somniferumRZC7693366.666759.0476
A4U43_C03F26540asparagus_officinalisONK7633729.126227.1845lactuca_sativacds-PLY90652.177.922172.7273
A4U43_C03F26540asparagus_officinalisONK7633793.203983.0097avena_sativa_sangAVESA.00010b.r2.2DG0336090.1.CDS93.203983.0097
A4U43_C03F26540asparagus_officinalisONK7633794.174887.8641avena_sativa_sangAVESA.00010b.r2.4DG0751420.1.CDS94.174887.8641
A4U43_C03F26540asparagus_officinalisONK7633794.174888.835avena_sativa_sangAVESA.00010b.r2.7CG0703480.1.CDS94.174888.835
A4U43_C03F26540asparagus_officinalisONK7633794.174887.8641avena_sativa_sangAVESA.00010b.r2.4AG0607810.1.CDS94.174887.8641
A4U43_C03F26540asparagus_officinalisONK7633793.203983.0097avena_sativa_sangAVESA.00010b.r2.2AG0214130.1.CDS93.203983.0097
A4U43_C03F26540asparagus_officinalisONK7633792.718482.5243avena_sativa_sangAVESA.00010b.r2.2CG0293190.1.CDS92.718482.5243
A4U43_C03F26540asparagus_officinalisONK7633793.203983.0097lolium_perennecds.KYUSt_chr2.3095393.203983.0097
A4U43_C03F26540asparagus_officinalisONK7633795.145687.3786lolium_perennecds.KYUSt_chr4.966595.145687.3786
A4U43_C03F26540asparagus_officinalisONK7633794.660288.3495oryza_brachyanthaOB03G41600.194.660288.3495
A4U43_C03F26540asparagus_officinalisONK7633791.262181.068oryza_brachyanthaOB07G10660.191.262181.068
A4U43_C03F26540asparagus_officinalisONK7633793.203982.5243oryza_punctataOPUNC07G00560.193.203982.5243
A4U43_C03F26540asparagus_officinalisONK7633794.660288.3495oryza_punctataOPUNC03G31730.194.660288.3495
A4U43_C03F26540asparagus_officinalisONK7633792.718482.5243avena_sativa_ot3098cds.AVESA.00001b.r3.2Dg0003361.182.327673.2759
A4U43_C03F26540asparagus_officinalisONK7633793.203983.0097avena_sativa_ot3098cds.AVESA.00001b.r3.2Ag0000798.182.758673.7069
A4U43_C03F26540asparagus_officinalisONK7633794.174887.8641avena_sativa_ot3098cds.AVESA.00001b.r3.4Ag0001554.194.174887.8641
A4U43_C03F26540asparagus_officinalisONK7633792.718482.5243secale_cerealeSECCE2Rv1G0097670.192.718482.5243
A4U43_C03F26540asparagus_officinalisONK7633793.689385.9223secale_cerealeSECCE5Rv1G0353450.193.689385.9223
A4U43_C03F26540asparagus_officinalisONK7633794.660288.3495oryza_glaberrimaORGLA03G0316700.194.660288.3495
A4U43_C03F26540asparagus_officinalisONK7633754.854450.9709oryza_glaberrimaORGLA03G0316400.173.376668.1818
A4U43_C03F26540asparagus_officinalisONK7633793.203982.5243oryza_glaberrimaORGLA07G0005600.193.203982.5243
A4U43_C03F26540asparagus_officinalisONK7633728.640827.1845oryza_glaberrimaORGLA11G0097700.184.285780
A4U43_C03F26540asparagus_officinalisONK7633794.660288.3495oryza_longistaminataKN538781.1_FGP00894.660288.3495
A4U43_C03F26540asparagus_officinalisONK7633793.689382.5243oryza_longistaminataKN539417.1_FGP00293.689382.5243
A4U43_C03F26540asparagus_officinalisONK7633795.145688.835setaria_italicaKQK8704895.145688.835
A4U43_C03F26540asparagus_officinalisONK7633787.378674.2718setaria_italicaKQL221399076.5
A4U43_C03F26540asparagus_officinalisONK7633794.660288.3495sorghum_bicolorEES1761394.660288.3495
A4U43_C03F26540asparagus_officinalisONK7633795.145688.3495sorghum_bicolorEER9342995.145688.3495
A4U43_C03F26540asparagus_officinalisONK7633795.145688.835setaria_viridisTKV9129095.145688.835
A4U43_C03F26540asparagus_officinalisONK7633786.893273.7864setaria_viridisTKW3001789.576
A4U43_C03F26540asparagus_officinalisONK7633792.718482.0388triticum_aestivumTraesCS2A02G260700.192.718482.0388
A4U43_C03F26540asparagus_officinalisONK7633793.689386.4078triticum_aestivumTraesCS5D02G402800.193.689386.4078
A4U43_C03F26540asparagus_officinalisONK7633793.689385.9223triticum_aestivumTraesCS5B02G397800.193.689385.9223
A4U43_C03F26540asparagus_officinalisONK7633793.203983.0097triticum_aestivumTraesCS2B02G281300.193.203983.0097
A4U43_C03F26540asparagus_officinalisONK7633792.718480.5825triticum_aestivumTraesCS2D02G263000.192.718480.5825
A4U43_C03F26540asparagus_officinalisONK7633793.689386.4078triticum_aestivumTraesCS5A02G392900.193.689386.4078
A4U43_C03F26540asparagus_officinalisONK7633772.815554.3689homo_sapiensENSP0000037573073.891655.1724
A4U43_C03F26540asparagus_officinalisONK7633794.174889.3204ananas_comosusAco017570.1.mrna194.174889.3204
A4U43_C03F26540asparagus_officinalisONK7633793.203989.8058ananas_comosusAco012467.1.mrna193.203989.8058
A4U43_C03F26540asparagus_officinalisONK7633793.689386.4078triticum_urartuTuG1812S0002686100.01.T0193.689386.4078
A4U43_C03F26540asparagus_officinalisONK7633792.718482.0388triticum_urartuTuG1812G0200002990.01.T0192.718482.0388
A4U43_C03F26540asparagus_officinalisONK7633793.203982.5243oryza_glumipatulaOGLUM07G00700.193.203982.5243
A4U43_C03F26540asparagus_officinalisONK7633736.407834.9515oryza_glumipatulaOGLUM03G34300.190.361486.747
A4U43_C03F26540asparagus_officinalisONK7633794.660288.3495oryza_glumipatulaOGLUM03G34330.294.660288.3495
A4U43_C03F26540asparagus_officinalisONK7633770.873851.9417drosophila_melanogasterFBpp007835471.219552.1951
A4U43_C03F26540asparagus_officinalisONK7633729.126227.6699oryza_sativaOs11t0425800-0185.714381.4286
A4U43_C03F26540asparagus_officinalisONK7633794.660288.3495oryza_sativaOs03t0756000-0194.660288.3495
A4U43_C03F26540asparagus_officinalisONK7633793.203982.5243oryza_sativaOs07t0109500-0193.203982.5243
A4U43_C03F26540asparagus_officinalisONK7633744.660242.233oryza_sativaOs03t0755700-0069.69765.9091
A4U43_C03F26540asparagus_officinalisONK7633746.601940.2913prunus_aviumPav_sc0000022.1_g150.1.mk:CDS:191.428679.0476
A4U43_C03F26540asparagus_officinalisONK7633794.660288.835brachypodium_distachyonKQK1313594.660288.835
A4U43_C03F26540asparagus_officinalisONK7633793.203983.9806brachypodium_distachyonKQK2119593.203983.9806
A4U43_C03F26540asparagus_officinalisONK7633780.582571.8447aegilops_tauschiiAET5Gv20913300.373.777865.7778
A4U43_C03F26540asparagus_officinalisONK7633778.155367.9612aegilops_tauschiiAET2Gv20590900.367.083358.3333
A4U43_C03F26540asparagus_officinalisONK7633736.893230.5825chenopodium_quinoaAUR62037743-RA:cds77.55164.2857
A4U43_C03F26540asparagus_officinalisONK7633792.718487.3786musa_acuminataMa06_p10350.192.718487.3786
A4U43_C03F26540asparagus_officinalisONK7633793.689389.3204musa_acuminataMa06_p17140.193.689389.3204
A4U43_C03F26540asparagus_officinalisONK7633794.174888.835musa_acuminataMa10_p13320.194.174888.835
A4U43_C03F26540asparagus_officinalisONK7633793.203988.3495musa_acuminataMa06_p24450.193.203988.3495
A4U43_C03F26540asparagus_officinalisONK7633746.116542.7184musa_acuminataMa10_p05300.187.96381.4815
A4U43_C03F26540asparagus_officinalisONK7633793.689387.8641musa_acuminataMa03_p18980.193.689387.8641
A4U43_C03F26540asparagus_officinalisONK7633742.23336.8932olea_europaeaOE9A057969C165.909157.5758
A4U43_C03F26540asparagus_officinalisONK7633795.145689.3204panicum_halliiPUZ3697095.145689.3204
A4U43_C03F26540asparagus_officinalisONK7633747.572838.835panicum_halliiPUZ6822080.327965.5738
A4U43_C03F26540asparagus_officinalisONK7633751.941740.7767cynara_cardunculusKVI1113330.397723.8636
A4U43_C03F26540asparagus_officinalisONK7633733.009727.1845cynara_cardunculusKVI0068043.87136.129
A4U43_C03F26540asparagus_officinalisONK7633790.291383.0097nymphaea_colorataNC3G0207560.1:cds90.291383.0097
A4U43_C03F26540asparagus_officinalisONK7633790.291383.9806nymphaea_colorataNC2G0003220.1:cds82.666776.8889
A4U43_C03F26540asparagus_officinalisONK7633742.718440.2913dioscorea_rotundataDRNTG_25481.1.cds196.703391.2088
A4U43_C03F26540asparagus_officinalisONK7633793.689388.3495dioscorea_rotundataDRNTG_22284.193.689388.3495
A4U43_C03F26540asparagus_officinalisONK7633794.660288.835dioscorea_rotundataDRNTG_10385.194.660288.835
A4U43_C03F26540asparagus_officinalisONK7633794.174890.7767dioscorea_rotundataDRNTG_25480.194.174890.7767
A4U43_C03F26540asparagus_officinalisONK7633792.718482.0388triticum_turgidumTRITD2Av1G147150.192.718482.0388
A4U43_C03F26540asparagus_officinalisONK7633793.203983.0097triticum_turgidumTRITD2Bv1G129050.293.203983.0097
A4U43_C03F26540asparagus_officinalisONK7633793.689385.9223triticum_turgidumTRITD3Bv1G210300.193.689385.9223
A4U43_C03F26540asparagus_officinalisONK7633793.689386.4078triticum_turgidumTRITD5Av1G205050.193.689386.4078
A4U43_C03F26540asparagus_officinalisONK7633793.203982.5243oryza_indicaBGIOSGA024956-PA93.203982.5243
A4U43_C03F26540asparagus_officinalisONK7633729.126227.6699oryza_indicaBGIOSGA001590-PA85.714381.4286
A4U43_C03F26540asparagus_officinalisONK7633794.660288.3495oryza_indicaBGIOSGA013586-PA94.660288.3495
A4U43_C03F26540asparagus_officinalisONK7633743.203939.8058oryza_indicaBGIOSGA013585-PA88.118881.1881
A4U43_C03F26540asparagus_officinalisONK7633795.145688.835saccharum_spontaneumSspon.07G0014870-1A-mRNA-195.145688.835
A4U43_C03F26540asparagus_officinalisONK7633794.174886.8932saccharum_spontaneumSspon.01G0028490-2B-mRNA-1:cds85.462678.8546
A4U43_C03F26540asparagus_officinalisONK7633795.145688.835saccharum_spontaneumSspon.07G0014870-3C-mRNA-1:cds95.145688.835
A4U43_C03F26540asparagus_officinalisONK7633795.145688.835saccharum_spontaneumSspon.01G0028490-3D-mRNA-195.145688.835
A4U43_C03F26540asparagus_officinalisONK7633788.83582.0388saccharum_spontaneumSspon.01G0028490-1P-mRNA-188.405881.6425
A4U43_C03F26540asparagus_officinalisONK7633766.504948.5437caenorhabditis_elegansM01F1.2.167.821849.505
A4U43_C03F26540asparagus_officinalisONK7633747.087442.233fraxinus_excelsiorFRAEX38873_v2_000318490.1.cds183.620775
A4U43_C03F26540asparagus_officinalisONK7633794.660288.3495echinochloa_crusgalliscaffold3.1083.cds94.660288.3495
A4U43_C03F26540asparagus_officinalisONK7633785.436974.2718echinochloa_crusgalliscaffold105.65.cds8876.5
A4U43_C03F26540asparagus_officinalisONK7633795.145688.835echinochloa_crusgalliscaffold35.75.cds70.758166.065
A4U43_C03F26540asparagus_officinalisONK7633784.951573.301echinochloa_crusgalliscaffold7.689.cds87.939775.8794
A4U43_C03F26540asparagus_officinalisONK7633783.980672.3301echinochloa_crusgalliscaffold208.101.cds86.574.5
A4U43_C03F26540asparagus_officinalisONK7633794.660287.8641echinochloa_crusgalliscaffold32.581.cds94.660287.8641
A4U43_C03F26540asparagus_officinalisONK7633756.796145.1456echinochloa_crusgalliscaffold82.22.cds35.454528.1818
A4U43_C03F26540asparagus_officinalisONK7633767.961246.6019ostreococcus_lucimarinusABO9897270.351848.2412
A4U43_C03F26540asparagus_officinalisONK7633764.563158.2524triticum_dicoccoidesTRIDC7BG043650.573.480766.2983
A4U43_C03F26540asparagus_officinalisONK7633793.203983.0097triticum_dicoccoidesTRIDC2BG040810.179.668170.9544
A4U43_C03F26540asparagus_officinalisONK7633793.689386.4078triticum_dicoccoidesTRIDC5AG057160.293.689386.4078
A4U43_C03F26540asparagus_officinalisONK7633793.689385.9223triticum_dicoccoidesTRIDC5BG061310.292.344584.689
A4U43_C03F26540asparagus_officinalisONK7633792.718482.0388triticum_dicoccoidesTRIDC2AG036960.174.90266.2745
A4U43_C03F26540asparagus_officinalisONK7633794.174887.8641leersia_perrieriLPERR03G29090.194.174887.8641
A4U43_C03F26540asparagus_officinalisONK7633771.359262.1359vitis_viniferaVitvi15g01410_P00159.036151.4056
A4U43_C03F26540asparagus_officinalisONK7633773.786468.4466oryza_barthiiOBART03G34670.195.597588.6792
A4U43_C03F26540asparagus_officinalisONK7633747.572843.6893oryza_barthiiOBART03G34650.161.2556.25
A4U43_C03F26540asparagus_officinalisONK7633785.436972.3301eragrostis_curvulaTVU4028872.727361.5702
A4U43_C03F26540asparagus_officinalisONK7633794.660288.3495eragrostis_curvulaTVU4495794.660288.3495
A4U43_C03F26540asparagus_officinalisONK7633794.660288.3495eragrostis_curvulaTVT9785894.660288.3495
A4U43_C03F26540asparagus_officinalisONK7633732.038829.1262coffea_canephoraCDP2059369.473763.1579
A4U43_C03F26540asparagus_officinalisONK7633786.893277.1845selaginella_moellendorffiiEFJ3479886.893277.1845
A4U43_C03F26540asparagus_officinalisONK7633786.893277.1845selaginella_moellendorffiiEFJ2353286.893277.1845
A4U43_C03F26540asparagus_officinalisONK7633771.359254.8544cyanidioschyzon_merolaeCMR122CT72.413855.665
A4U43_C03F26540asparagus_officinalisONK7633794.660286.8932zea_maysZm00001eb214650_P00294.660286.8932
A4U43_C03F26540asparagus_officinalisONK7633795.145688.835zea_maysZm00001eb057690_P00195.145688.835
A4U43_C03F26540asparagus_officinalisONK7633772.330148.5437galdieria_sulphurariaEME3206472.330148.5437
A4U43_C03F26540asparagus_officinalisONK7633762.621447.5728saccharomyces_cerevisiaeYNL069C65.151549.4949
A4U43_C03F26540asparagus_officinalisONK7633762.621446.6019saccharomyces_cerevisiaeYIL133C64.824148.2412
A4U43_C03F26540asparagus_officinalisONK7633794.660288.3495eragrostis_tefEt_4A_035515.CDS86.666780.8889
A4U43_C03F26540asparagus_officinalisONK7633794.660288.3495eragrostis_tefEt_4B_037992.CDS94.660288.3495
A4U43_C03F26540asparagus_officinalisONK7633783.980670.3884eragrostis_tefEt_5A_041331.CDS74.248962.2318
A4U43_C03F26540asparagus_officinalisONK7633784.951571.8447eragrostis_tefEt_5B_044003.CDS76.08764.3478
A4U43_C03F26540asparagus_officinalisONK7633794.660288.3495oryza_meridionalisOMERI03G31720.194.660288.3495
A4U43_C03F26540asparagus_officinalisONK7633793.203982.5243oryza_meridionalisOMERI07G00220.193.203982.5243
A4U43_C03F26540asparagus_officinalisONK7633769.902949.5146ciona_savignyiENSCSAVP0000000118469.902949.5146
A4U43_C03F26540asparagus_officinalisONK7633741.262133.4951gossypium_raimondiiKJB2825075.221261.0619
A4U43_C03F26540asparagus_officinalisONK7633732.524326.2136gossypium_raimondiiKJB2824369.791756.25
A4U43_C03F26540asparagus_officinalisONK7633783.495170.8738chara_brauniiGBG6519681.516669.1943
A4U43_C03F26540asparagus_officinalisONK7633786.407874.2718digitaria_exilisDexi2A01G0000820.1:cds8976.5
A4U43_C03F26540asparagus_officinalisONK7633795.145688.835digitaria_exilisDexi9A01G0008390.1:cds95.145688.835
A4U43_C03F26540asparagus_officinalisONK7633784.951572.3301digitaria_exilisDexi2B01G0000780.1:cds87.574.5
A4U43_C03F26540asparagus_officinalisONK7633795.145688.835digitaria_exilisDexi9B01G0007950.1:cds95.145688.835
A4U43_C03F26540asparagus_officinalisONK7633793.203982.5243oryza_nivaraONIVA01G47430.193.203982.5243
A4U43_C03F26540asparagus_officinalisONK7633729.126227.6699oryza_nivaraONIVA12G14390.185.714381.4286
A4U43_C03F26540asparagus_officinalisONK7633794.660288.3495oryza_nivaraONIVA03G36150.194.660288.3495

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression