Description

Ensembl ID A4U43_C03F19930 Gene ID Accession -
Symbol Alias - Full Name uncharacterized protein
Status Confidence Length 23279 bases Strand Plus strand
Position 3 : 49801163 - 49824441 RNA binding domain Spt5-NGN
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ONK75729 Spt5-NGN PF03439 6.1e-22 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
A4U43_C03F19930asparagus_officinalisONK6778635.783422.9207asparagus_officinalisONK7572921.637413.8596

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
A4U43_C03F19930asparagus_officinalisONK7572921.169612.3392physcomitrium_patensPp3c16_360V3.233.059419.2694
A4U43_C03F19930asparagus_officinalisONK7572923.391817.2515papaver_somniferumRZC7054048.543735.801
A4U43_C03F19930asparagus_officinalisONK7572936.023425.614papaver_somniferumRZC7703035.834825.4799
A4U43_C03F19930asparagus_officinalisONK7572935.321623.2749ficus_caricaFCD_00036167-RA:cds34.357222.6394
A4U43_C03F19930asparagus_officinalisONK7572930.760221.5205beta_vulgarisKMS9704641.845729.2761
A4U43_C03F19930asparagus_officinalisONK7572937.660825.6725citrullus_lanatusCla97C08G150590.136.058224.5801
A4U43_C03F19930asparagus_officinalisONK7572935.964924.8538theobroma_cacaoEOY1883338.533826.6291
A4U43_C03F19930asparagus_officinalisONK7572934.035123.0994cucumis_sativusKGN6219239.53826.8342
A4U43_C03F19930asparagus_officinalisONK7572935.029223.6257populus_trichocarpaPotri.008G032800.5.v4.133.075622.3081
A4U43_C03F19930asparagus_officinalisONK7572920.994214.7368populus_trichocarpaPotri.010G228766.2.v4.162.762244.0559
A4U43_C03F19930asparagus_officinalisONK7572936.081923.4503arabidopsis_thalianaAT5G04290.141.326226.8587
A4U43_C03F19930asparagus_officinalisONK7572929.532220.4094brassica_napusCDX7024544.769530.9397
A4U43_C03F19930asparagus_officinalisONK7572921.637414.5614brassica_napusCDY4138449.006632.9801
A4U43_C03F19930asparagus_officinalisONK757298.888894.15205brassica_junceacds.BjuUnng17670S21.05269.83379
A4U43_C03F19930asparagus_officinalisONK7572936.491224.9708prunus_persicaONI2375936.342524.869
A4U43_C03F19930asparagus_officinalisONK7572936.666725.0877prunus_dulcisVVA1217036.517224.9854
A4U43_C03F19930asparagus_officinalisONK7572934.093622.6316cajanus_cajanC.cajan_08068.t38.154425.3272
A4U43_C03F19930asparagus_officinalisONK7572934.26923.8012malus_domestica_goldenmRNA:MD07G013780038.988727.0792
A4U43_C03F19930asparagus_officinalisONK7572934.15223.6842malus_domestica_goldenmRNA:MD01G007830038.933327
A4U43_C03F19930asparagus_officinalisONK7572932.690122.1637medicago_truncatulaKEH4427342.156928.5822
A4U43_C03F19930asparagus_officinalisONK7572920.526312.5146lupinus_angustifoliusOIW1294632.025519.5255
A4U43_C03F19930asparagus_officinalisONK7572934.736822.807lupinus_angustifoliusOIW1295237.834424.8408
A4U43_C03F19930asparagus_officinalisONK7572911.11117.95322lupinus_angustifoliusOIV9094755.555639.7661
A4U43_C03F19930asparagus_officinalisONK7572930.877220.4094phaseolus_vulgarisESW1487342.996728.4202
A4U43_C03F19930asparagus_officinalisONK7572933.274922.2222glycine_maxKRH3599139.187326.1708
A4U43_C03F19930asparagus_officinalisONK7572933.684222.3392glycine_maxKRG9077038.528425.5518
A4U43_C03F19930asparagus_officinalisONK7572916.25739.64912glycine_maxKRG9081031.026818.4152
A4U43_C03F19930asparagus_officinalisONK7572932.046822.3392pisum_sativumPsat6g230120.1.cds38.810227.0538
A4U43_C03F19930asparagus_officinalisONK7572933.742722.1053vigna_unguiculataVigun07g272900.1.v1.236.728224.0611
A4U43_C03F19930asparagus_officinalisONK757299.356726.54971vigna_angularisKOM3193532.388722.6721
A4U43_C03F19930asparagus_officinalisONK7572931.871320.2924vigna_angularisKOM3635038.085324.2488
A4U43_C03F19930asparagus_officinalisONK7572935.61423.6257sesamum_indicumSIN_1012916.t36.554624.2497
A4U43_C03F19930asparagus_officinalisONK7572935.789524.6199capsicum_annuumPHT6432638.906526.7641
A4U43_C03F19930asparagus_officinalisONK7572931.228121.2866helianthus_annuusmRNA:HanXRQr2_Chr14g066177139.380526.8437
A4U43_C03F19930asparagus_officinalisONK757296.257313.68421lactuca_sativacds-PLY75020.149.308829.0323
A4U43_C03F19930asparagus_officinalisONK7572929.473720.2924lactuca_sativacds-PLY73158.146.196231.8057
A4U43_C03F19930asparagus_officinalisONK757295.555563.15789lactuca_sativacds-PLY63582.157.575832.7273
A4U43_C03F19930asparagus_officinalisONK7572911.81296.25731lactuca_sativacds-PLY73141.147.641525.2358
A4U43_C03F19930asparagus_officinalisONK7572934.26922.8655solanum_lycopersicumSolyc11g008150.2.139.381726.2769
A4U43_C03F19930asparagus_officinalisONK7572936.783625.2047manihot_esculentaOAY4582235.901824.6005
A4U43_C03F19930asparagus_officinalisONK7572936.842125.7895avena_sativa_sangAVESA.00010b.r2.1AG0011350.2.CDS4028
A4U43_C03F19930asparagus_officinalisONK7572937.309926.0819avena_sativa_sangAVESA.00010b.r2.1DG0161820.1.CDS40.559428.3535
A4U43_C03F19930asparagus_officinalisONK7572931.228121.5789lolium_perennecds.KYUSt_chr1.3746938.978126.9343
A4U43_C03F19930asparagus_officinalisONK7572936.257324.5614oryza_brachyanthaOB05G29680.143.356629.3706
A4U43_C03F19930asparagus_officinalisONK7572934.561423.5673oryza_rufipogonORUFI05G23440.139.452626.9025
A4U43_C03F19930asparagus_officinalisONK7572937.19325.9649oryza_punctataOPUNC05G19710.140.509628.2803
A4U43_C03F19930asparagus_officinalisONK7572937.660826.3158avena_sativa_ot3098cds.AVESA.00001b.r3.1Ag0001674.239.172727.3723
A4U43_C03F19930asparagus_officinalisONK7572937.543926.0819avena_sativa_ot3098cds.AVESA.00001b.r3.1Dg0001708.239.386527.362
A4U43_C03F19930asparagus_officinalisONK7572936.900625.9064avena_sativa_ot3098cds.AVESA.00001b.r3.1Ag0003209.139.216927.5326
A4U43_C03F19930asparagus_officinalisONK7572937.719327.2515secale_cerealeSECCE1Rv1G0046430.141.346229.8718
A4U43_C03F19930asparagus_officinalisONK7572935.029224.0936oryza_longistaminataKN540181.1_FGP00339.668927.2848
A4U43_C03F19930asparagus_officinalisONK7572923.859617.4854setaria_italicaKQL1482557.38442.0534
A4U43_C03F19930asparagus_officinalisONK7572938.53827.0175sorghum_bicolorOQU7826741.420529.0383
A4U43_C03F19930asparagus_officinalisONK7572940.350928.1287setaria_viridisTKW2646039.632427.6278
A4U43_C03F19930asparagus_officinalisONK7572937.777826.7836triticum_aestivumTraesCS1B02G337800.241.120329.1534
A4U43_C03F19930asparagus_officinalisONK7572934.795324.5029triticum_aestivumTraesCS1D02G325500.142.652330.0358
A4U43_C03F19930asparagus_officinalisONK7572937.251526.4912triticum_aestivumTraesCS1A02G324800.141.176529.2825
A4U43_C03F19930asparagus_officinalisONK7572938.53827.7778ananas_comosusAco005272.1.mrna137.507127.0347
A4U43_C03F19930asparagus_officinalisONK7572934.795324.5614triticum_urartuTuG1812G0100003655.01.T0142.591330.0644
A4U43_C03F19930asparagus_officinalisONK7572937.134525.848oryza_glumipatulaOGLUM05G23360.239.836927.729
A4U43_C03F19930asparagus_officinalisONK7572937.309924.8538ipomoea_trilobaitb11g07820.t136.208924.1203
A4U43_C03F19930asparagus_officinalisONK7572913.74279.35672oryza_sativaOs05t0506200-0140.102427.3038
A4U43_C03F19930asparagus_officinalisONK7572936.257325.0292prunus_aviumPav_sc0001183.1_g380.1.mk:mrna36.708125.3404
A4U43_C03F19930asparagus_officinalisONK7572938.128726.3158brachypodium_distachyonKQK0551939.539127.2893
A4U43_C03F19930asparagus_officinalisONK7572937.251526.4912aegilops_tauschiiAET1Gv20784200.541.070329.207
A4U43_C03F19930asparagus_officinalisONK7572927.602318.5965chenopodium_quinoaAUR62027342-RA:cds44.909630.2569
A4U43_C03F19930asparagus_officinalisONK7572932.80722.5146arabis_alpinaKFK2488038.556726.4605
A4U43_C03F19930asparagus_officinalisONK7572929.649120.8187rosa_chinensisPRQ5870745.882432.2172
A4U43_C03F19930asparagus_officinalisONK7572935.438624.6199quercus_lobataQL08p053377:mrna39.046427.1263
A4U43_C03F19930asparagus_officinalisONK7572938.187126.4912musa_acuminataMa07_p17400.236.097325.0415
A4U43_C03F19930asparagus_officinalisONK7572910.99427.30994olea_europaeaOE9A060677C136.504924.2718
A4U43_C03F19930asparagus_officinalisONK757293.859652.69006olea_europaeaOE9A023713C181.481556.7901
A4U43_C03F19930asparagus_officinalisONK757294.795323.39181olea_europaeaOE9A026023C156.551740
A4U43_C03F19930asparagus_officinalisONK7572921.812916.1988olea_europaeaOE9A050421C149.078936.4474
A4U43_C03F19930asparagus_officinalisONK7572939.590627.6608panicum_halliiPUZ6529440.369728.2051
A4U43_C03F19930asparagus_officinalisONK7572927.777818.2456cynara_cardunculusKVI0969438.870725.5319
A4U43_C03F19930asparagus_officinalisONK7572919.88313.6257nymphaea_colorataNC6G0041240.1:cds52.147235.7362
A4U43_C03F19930asparagus_officinalisONK7572933.859624.6784dioscorea_rotundataDRNTG_29796.147.536934.647
A4U43_C03F19930asparagus_officinalisONK7572937.368426.4327triticum_turgidumTRITD1Bv1G181060.640.315528.5173
A4U43_C03F19930asparagus_officinalisONK7572935.497124.5614triticum_turgidumTRITD1Av1G191580.139.492527.326
A4U43_C03F19930asparagus_officinalisONK7572935.497123.7427arabidopsis_hallerig15757.t141.096827.4882
A4U43_C03F19930asparagus_officinalisONK7572924.093615.7895eutrema_salsugineumESQ4368044.017128.8462
A4U43_C03F19930asparagus_officinalisONK7572921.578914.4444eutrema_salsugineumESQ4033853.478335.7971
A4U43_C03F19930asparagus_officinalisONK7572925.087716.9591pistacia_veracds-EVM0001585.132.207221.7718
A4U43_C03F19930asparagus_officinalisONK7572936.257324.9708oryza_indicaBGIOSGA020147-PA39.641927.3018
A4U43_C03F19930asparagus_officinalisONK7572934.736823.8012kalanchoe_fedtschenkoiKaladp0024s0372.1.v1.140.10827.4814
A4U43_C03F19930asparagus_officinalisONK7572935.321623.9766corymbia_citriodoracds-KAF8039122.135.697424.2317
A4U43_C03F19930asparagus_officinalisONK7572937.426925.731citrus_clementinaESR4976035.417824.3498
A4U43_C03F19930asparagus_officinalisONK7572928.596519.0058fraxinus_excelsiorFRAEX38873_v2_000346600.1.cds38.262925.4304
A4U43_C03F19930asparagus_officinalisONK7572931.169619.7661fraxinus_excelsiorFRAEX38873_v2_000248830.1.cds35.868122.7456
A4U43_C03F19930asparagus_officinalisONK7572939.88327.3099echinochloa_crusgalliscaffold32.197.cds40.094127.4544
A4U43_C03F19930asparagus_officinalisONK7572939.649127.076echinochloa_crusgalliscaffold39.132.cds41.929528.6333
A4U43_C03F19930asparagus_officinalisONK7572940.175427.6608echinochloa_crusgalliscaffold12.388.cds40.96628.2051
A4U43_C03F19930asparagus_officinalisONK7572936.900626.0819triticum_dicoccoidesTRIDC1BG054700.1542.405929.9731
A4U43_C03F19930asparagus_officinalisONK7572936.315825.7895triticum_dicoccoidesTRIDC1AG048280.442.302530.0409
A4U43_C03F19930asparagus_officinalisONK7572932.046822.1053trifolium_pratenseTp57577_TGAC_v2_mRNA2717242.513629.3251
A4U43_C03F19930asparagus_officinalisONK7572934.502923.9181brassica_rapa_ro18A10p039170.1_BraROA.137.869126.2516
A4U43_C03F19930asparagus_officinalisONK7572936.783624.9708leersia_perrieriLPERR05G17980.340.243127.3193
A4U43_C03F19930asparagus_officinalisONK7572934.970823.3918eucalyptus_grandisKCW5153137.539225.1099
A4U43_C03F19930asparagus_officinalisONK7572934.736823.8596actinidia_chinensisPSR9298937.429125.7089
A4U43_C03F19930asparagus_officinalisONK7572927.602318.7134actinidia_chinensisPSR9807232.869122.2841
A4U43_C03F19930asparagus_officinalisONK7572934.736823.8596brassica_oleraceaBo9g181270.139.973127.4563
A4U43_C03F19930asparagus_officinalisONK757295.964914.67836vitis_viniferaVitvi03g04313_P00164.55750.6329
A4U43_C03F19930asparagus_officinalisONK7572936.315825.4386vitis_viniferaVitvi13g00674_P00136.273425.4089
A4U43_C03F19930asparagus_officinalisONK757295.204683.80117vitis_viniferaVitvi14g01042_P00171.774252.4194
A4U43_C03F19930asparagus_officinalisONK7572935.263223.9181arabidopsis_lyratafgenesh2_kg.6__344__AT5G04290.140.853727.71
A4U43_C03F19930asparagus_officinalisONK7572936.315825.1462oryza_barthiiOBART05G22060.141.566328.7818
A4U43_C03F19930asparagus_officinalisONK7572933.742722.1637camelina_sativaCsa13g006290.140.719826.7466
A4U43_C03F19930asparagus_officinalisONK7572932.865521.9883camelina_sativaCsa08g060200.137.998625.4226
A4U43_C03F19930asparagus_officinalisONK7572928.771917.4269camelina_sativaCsa20g005480.135.067721.2402
A4U43_C03F19930asparagus_officinalisONK7572934.210523.2749daucus_carotaKZM8694536.978525.158
A4U43_C03F19930asparagus_officinalisONK7572925.263216.7251daucus_carotaKZN0556435.294123.366
A4U43_C03F19930asparagus_officinalisONK7572935.61424.6784eragrostis_curvulaTVU2066740.817728.2842
A4U43_C03F19930asparagus_officinalisONK7572922.339215.6725coffea_canephoraCDO9980355.604139.0102
A4U43_C03F19930asparagus_officinalisONK7572938.421126.6082zea_maysZm00001eb352910_P00141.268828.5804
A4U43_C03F19930asparagus_officinalisONK7572939.298226.9591zea_maysZm00001eb292250_P0014228.8125
A4U43_C03F19930asparagus_officinalisONK7572934.912323.6842amborella_trichopodaERN0128035.035223.7676
A4U43_C03F19930asparagus_officinalisONK7572935.380124.4444quercus_subercds-POE76563.137.859826.1577
A4U43_C03F19930asparagus_officinalisONK7572936.081924.8538eragrostis_tefEt_9B_065191.CDS43.66630.0778
A4U43_C03F19930asparagus_officinalisONK7572934.853823.9766eragrostis_tefEt_9A_062622.CDS43.727130.0807
A4U43_C03F19930asparagus_officinalisONK7572922.339215.6725juglans_regiacds.Jr07_34020_p155.043238.6167
A4U43_C03F19930asparagus_officinalisONK7572922.339215.6725juglans_regiacds.Jr07_34010_p154.96438.5611
A4U43_C03F19930asparagus_officinalisONK7572937.368425.848oryza_meridionalisOMERI05G19840.439.738827.4876
A4U43_C03F19930asparagus_officinalisONK7572923.391815.614corchorus_capsularisOMO8777338.6125.7722
A4U43_C03F19930asparagus_officinalisONK7572935.61424.152corchorus_capsularisOMO6568639.417526.7314
A4U43_C03F19930asparagus_officinalisONK7572935.321623.9766gossypium_raimondiiKJB7347838.643626.2316
A4U43_C03F19930asparagus_officinalisONK7572937.368427.1345hordeum_vulgareHORVU.MOREX.r3.1HG0076280.141.332530.0129
A4U43_C03F19930asparagus_officinalisONK7572934.619923.9181digitaria_exilisDexi3B01G0020080.1:cds38.095226.3192
A4U43_C03F19930asparagus_officinalisONK7572918.362613.3333digitaria_exilisDexi3A01G0019560.1:cds60.970944.2718
A4U43_C03F19930asparagus_officinalisONK7572920.935713.5673digitaria_exilisDexi3A01G0019550.1:cds31.709520.5492
A4U43_C03F19930asparagus_officinalisONK7572934.853822.3977vigna_radiataVradi08g21570.138.827424.9511
A4U43_C03F19930asparagus_officinalisONK7572937.134525.848oryza_nivaraONIVA05G22780.140.471628.1708

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression