| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | A4U43_C03F1170 | Gene ID |
|
Accession |
- |
| Symbol |
|
Alias |
- |
Full Name |
uncharacterized protein
|
| Status |
Confidence |
Length |
11515 bases |
Strand |
Minus strand |
| Position |
3 : 2497594 - 2509108 |
RNA binding domain |
RNA_pol_Rpb2_1 , RNA_pol_Rpb2_3 , RNA_pol_Rpb2_7 , RNA_pol_Rpb2_6 , RNA_pol_Rpb2_4 , RNA_pol_Rpb2_5 |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ONK73942 |
RNA_pol_Rpb2_1 |
PF04563 |
1.3e-31 |
1 |
| ONK73942 |
RNA_pol_Rpb2_3 |
PF04565 |
7.7e-12 |
2 |
| ONK73942 |
RNA_pol_Rpb2_7 |
PF04560 |
1.2e-29 |
3 |
| ONK73942 |
RNA_pol_Rpb2_6 |
PF00562 |
1.5e-97 |
4 |
| ONK73942 |
RNA_pol_Rpb2_4 |
PF04566 |
8.3e-23 |
5 |
| ONK73942 |
RNA_pol_Rpb2_5 |
PF04567 |
8.3e-08 |
6 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| A4U43_C03F1170 | asparagus_officinalis | ONK81474 | 44.7368 | 27.8947 | asparagus_officinalis | ONK73942 | 8.62944 | 5.38071 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73633 | 42.9153 | 29.1531 | asparagus_officinalis | ONK73942 | 53.5025 | 36.3452 |
| A4U43_C03F1170 | asparagus_officinalis | ONK81475 | 34.4828 | 21.0129 | asparagus_officinalis | ONK73942 | 32.4873 | 19.797 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73747 | 35.2346 | 22.9991 | asparagus_officinalis | ONK73942 | 38.8832 | 25.3807 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 53.5025 | 37.7665 | physcomitrium_patens | Pp3c15_16480V3.1 | 42.5 | 30 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 56.3452 | 39.0863 | physcomitrium_patens | Pp3c4_16140V3.3 | 43.7697 | 30.3628 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 56.7513 | 38.5787 | marchantia_polymorpha | PTQ37343 | 35.7646 | 24.3122 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 79.2893 | 64.3655 | papaver_somniferum | RZC60655 | 62.6303 | 50.842 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 50.6599 | 44.3655 | papaver_somniferum | RZC59305 | 85.8864 | 75.2151 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 82.2335 | 69.4416 | avena_sativa_sang | AVESA.00010b.r2.7CG0704290.2.CDS | 65.3226 | 55.1613 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 82.9442 | 70.3553 | avena_sativa_sang | AVESA.00010b.r2.2CG0320900.1.CDS | 65.4647 | 55.5288 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 82.8426 | 70.3553 | avena_sativa_sang | AVESA.00010b.r2.2AG0242470.1.CDS | 65.3323 | 55.4844 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 82.8426 | 70.2538 | avena_sativa_sang | AVESA.00010b.r2.2DG0361000.1.CDS | 65.3323 | 55.4043 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 61.2183 | 53.9086 | lolium_perenne | cds.KYUSt_chr3.9247 | 67.0745 | 59.0656 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 74.3147 | 61.9289 | lolium_perenne | cds.KYUSt_chr2.53693 | 63.4866 | 52.9055 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 82.7411 | 69.7462 | oryza_brachyantha | OB04G33790.1 | 64.992 | 54.7847 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 82.5381 | 70.0508 | oryza_rufipogon | ORUFI04G28600.1 | 60.2222 | 51.1111 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 83.0457 | 70.0508 | oryza_punctata | OPUNC04G24470.1 | 65.2833 | 55.0678 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 82.7411 | 70.1523 | avena_sativa_ot3098 | cds.AVESA.00001b.r3.2Dg0002138.2 | 62.2137 | 52.7481 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 82.9442 | 70.1523 | avena_sativa_ot3098 | cds.AVESA.00001b.r3.2Cg0002908.1 | 65.4647 | 55.3686 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 82.8426 | 70.3553 | avena_sativa_ot3098 | cds.AVESA.00001b.r3.2Ag0002213.2 | 64.9165 | 55.1313 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 82.2335 | 69.3401 | avena_sativa_ot3098 | cds.AVESA.00001b.r3.4Ag0001602.6 | 62.7907 | 52.9457 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 82.2335 | 69.4416 | avena_sativa_ot3098 | cds.AVESA.00001b.r3.7Cg0000691.3 | 65.3226 | 55.1613 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 82.2335 | 69.3401 | avena_sativa_ot3098 | cds.AVESA.00001b.r3.4Dg0001948.3 | 65.3226 | 55.0806 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 83.3503 | 69.8477 | secale_cereale | SECCE2Rv1G0131770.1 | 65.4705 | 54.8644 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 82.8426 | 70.0508 | oryza_longistaminata | KN539249.1_FGP001 | 60.7595 | 51.3775 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 84.8731 | 71.1675 | setaria_italica | KQK99160 | 67.7472 | 56.8071 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 83.3503 | 70.4569 | sorghum_bicolor | EES11527 | 66.2631 | 56.0129 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 83.3503 | 71.1675 | sorghum_bicolor | EER95225 | 66.8567 | 57.0847 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 84.8731 | 71.1675 | setaria_viridis | TKW06878 | 67.7472 | 56.8071 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 83.5533 | 69.9492 | triticum_aestivum | TraesCS2B02G552400.1 | 66.6397 | 55.7895 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 81.1168 | 68.0203 | triticum_aestivum | TraesCS2D02G524500.1 | 64.1767 | 53.8153 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 83.4518 | 70.3553 | triticum_aestivum | TraesCS2A02G522400.1 | 66.5587 | 56.1134 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 85.8883 | 74.5178 | ananas_comosus | Aco009438.1.mrna1 | 70.6177 | 61.2688 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 83.3503 | 70.3553 | triticum_urartu | TuG1812G0200005680.01.T01 | 66.4777 | 56.1134 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 82.5381 | 70.0508 | oryza_glumipatula | OGLUM04G26910.2 | 60.2222 | 51.1111 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 82.5381 | 70.0508 | oryza_sativa | Os04t0641000-01 | 64.9361 | 55.1118 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 82.5381 | 69.4416 | brachypodium_distachyon | KQK03136 | 67.0239 | 56.3891 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 82.4365 | 68.8325 | brachypodium_distachyon | PNT61972 | 65.6958 | 54.8544 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 67.8173 | 55.9391 | brachypodium_distachyon | KQJ88135 | 63.8013 | 52.6266 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 83.5533 | 70.1523 | aegilops_tauschii | AET2Gv21153900.1 | 66.6397 | 55.9514 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 86.1929 | 75.1269 | musa_acuminata | Ma08_p18320.2 | 70.8681 | 61.7696 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 84.3655 | 71.5736 | panicum_hallii | PUZ49152 | 67.3966 | 57.1776 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 76.7513 | 62.132 | nymphaea_colorata | NC2G0034260.1:cds | 61.8152 | 50.0409 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 82.9442 | 71.8782 | dioscorea_rotundata | DRNTG_26824.1 | 71.9824 | 62.3789 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 83.5533 | 69.8477 | triticum_turgidum | TRITD2Bv1G243300.2 | 66.6397 | 55.7085 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 83.4518 | 70.3553 | triticum_turgidum | TRITD2Av1G278480.3 | 66.5587 | 56.1134 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 74.4162 | 62.5381 | oryza_indica | BGIOSGA017220-PA | 62.277 | 52.3364 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 10.6599 | 9.84772 | saccharum_spontaneum | Sspon.05G0022440-2C-mRNA-1:cds | 89.7436 | 82.906 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 22.9442 | 18.8832 | saccharum_spontaneum | Sspon.01G0036340-1B-mRNA-1 | 59.9469 | 49.3369 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 23.8579 | 22.335 | saccharum_spontaneum | Sspon.05G0022440-3D-mRNA-1:cds | 91.4397 | 85.6031 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 74.5178 | 62.335 | echinochloa_crusgalli | scaffold15.2.cds | 61.7325 | 51.64 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 24.6701 | 18.2741 | echinochloa_crusgalli | scaffold163.283.cds | 42.6316 | 31.5789 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 84.3655 | 71.066 | echinochloa_crusgalli | scaffold120.378.cds | 65.7957 | 55.4236 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 82.0305 | 69.2386 | echinochloa_crusgalli | scaffold324.2.cds | 65.2666 | 55.0889 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 83.4518 | 69.7462 | triticum_dicoccoides | TRIDC2BG079720.5 | 64.5719 | 53.967 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 83.4518 | 70.3553 | triticum_dicoccoides | TRIDC2AG073270.2 | 65.7074 | 55.3957 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 82.6396 | 69.1371 | leersia_perrieri | LPERR04G22610.1 | 61.3876 | 51.3575 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 57.0558 | 49.1371 | leersia_perrieri | LPERR10G02470.2 | 73.9474 | 63.6842 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 82.4365 | 70.0508 | oryza_barthii | OBART04G26940.1 | 61.3293 | 52.1148 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 22.9442 | 17.665 | camelina_sativa | Csa01g020840.1 | 75.0831 | 57.8073 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 8.12183 | 6.39594 | eragrostis_curvula | TVU06218 | 62.0155 | 48.8372 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 46.2944 | 31.5736 | selaginella_moellendorffii | EFJ29008 | 45.3731 | 30.9453 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 41.7259 | 29.0355 | selaginella_moellendorffii | EFJ09883 | 53.6554 | 37.3368 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 43.8579 | 29.9492 | selaginella_moellendorffii | EFJ13710 | 45.4737 | 31.0526 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 41.2183 | 29.1371 | selaginella_moellendorffii | EFJ15300 | 53.2808 | 37.664 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 83.4518 | 70.2538 | zea_mays | Zm00001eb431870_P001 | 66.8836 | 56.3059 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 83.4518 | 70.1523 | zea_mays | Zm00001eb068960_P001 | 66.8836 | 56.2246 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 75.1269 | 59.0863 | amborella_trichopoda | ERM94369 | 60.6061 | 47.6658 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 12.6904 | 11.8782 | eragrostis_tef | Et_8B_058815.CDS1 | 89.2857 | 83.5714 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 82.6396 | 69.8477 | oryza_meridionalis | OMERI04G22390.2 | 63.7431 | 53.8763 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 11.4721 | 7.51269 | chara_braunii | GBG74568 | 23.444 | 15.3527 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 17.4619 | 12.9949 | digitaria_exilis | Dexi7A01G0020450.1:cds | 19.8385 | 14.7636 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 8.0203 | 5.68528 | digitaria_exilis | Dexi5A01G0018260.1:cds | 24.8428 | 17.6101 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 50.7614 | 43.9594 | digitaria_exilis | Dexi7B01G0021230.1:cds | 78.7402 | 68.189 |
| A4U43_C03F1170 | asparagus_officinalis | ONK73942 | 82.5381 | 70.0508 | oryza_nivara | ONIVA04G25350.1 | 60.5361 | 51.3775 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
