Description

Ensembl ID A4U43_C02F10070 Gene ID Accession -
Symbol Alias - Full Name uncharacterized protein
Status Confidence Length 54898 bases Strand Minus strand
Position 2 : 23809532 - 23864429 RNA binding domain HA2 , OB_NTP_bind
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ONK77742 HA2 PF04408 9.9e-17 1
ONK77742 OB_NTP_bind PF07717 2.8e-16 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
A4U43_C02F10070asparagus_officinalisONK6675052.402433.1832asparagus_officinalisONK7774254.874234.7484
A4U43_C02F10070asparagus_officinalisONK6475835.530123.4957asparagus_officinalisONK7774258.490638.6792
A4U43_C02F10070asparagus_officinalisONK6702233.105222.5834asparagus_officinalisONK7774260.849141.5094
A4U43_C02F10070asparagus_officinalisONK6338322.754513.9222asparagus_officinalisONK7774247.798729.2453
A4U43_C02F10070asparagus_officinalisONK7560317.883810.5808asparagus_officinalisONK7774248.899428.9308
A4U43_C02F10070asparagus_officinalisONK7748621.000813.2075asparagus_officinalisONK7774240.251625.3145
A4U43_C02F10070asparagus_officinalisONK6599645.64131.2821asparagus_officinalisONK7774255.974838.3648
A4U43_C02F10070asparagus_officinalisONK5815762.541.0714asparagus_officinalisONK7774211.00637.2327
A4U43_C02F10070asparagus_officinalisONK6886925.803615.9861asparagus_officinalisONK7774246.698128.9308
A4U43_C02F10070asparagus_officinalisONK8141724.915815.2357asparagus_officinalisONK7774246.540928.4591
A4U43_C02F10070asparagus_officinalisONK7079031.595719.3617asparagus_officinalisONK7774246.698128.6164
A4U43_C02F10070asparagus_officinalisONK6281422.514613.7427asparagus_officinalisONK7774212.10697.38994
A4U43_C02F10070asparagus_officinalisONK7021154.408134.2569asparagus_officinalisONK7774233.962321.3836
A4U43_C02F10070asparagus_officinalisONK7021017.488312.0892asparagus_officinalisONK7774223.427716.195
A4U43_C02F10070asparagus_officinalisONK7444623.127614.2387asparagus_officinalisONK7774244.182427.2013
A4U43_C02F10070asparagus_officinalisONK6317751.444333.0124asparagus_officinalisONK7774258.80537.7358

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
A4U43_C02F10070asparagus_officinalisONK7774268.081852.5157chlamydomonas_reinhardtiiPNW7527448.325937.2768
A4U43_C02F10070asparagus_officinalisONK7774276.257960.6918physcomitrium_patensPAC:32929452.CDS.168.9954.9075
A4U43_C02F10070asparagus_officinalisONK7774286.006375.3145papaver_somniferumRZC7465157.157850.0522
A4U43_C02F10070asparagus_officinalisONK7774286.163575.4717papaver_somniferumRZC7002178.17468.4736
A4U43_C02F10070asparagus_officinalisONK7774285.220173.7421cannabis_sativa_femalecds.evm.model.04.43174.043764.071
A4U43_C02F10070asparagus_officinalisONK7774285.377472.327ficus_caricaFCD_00002599-RA:cds76.050464.4258
A4U43_C02F10070asparagus_officinalisONK7774280.974868.8679beta_vulgarisKMT0751572.637561.7771
A4U43_C02F10070asparagus_officinalisONK7774283.647873.2704citrullus_lanatusCla97C08G160950.175.783566.3818
A4U43_C02F10070asparagus_officinalisONK7774284.43474.8428theobroma_cacaoEOY0085776.714368
A4U43_C02F10070asparagus_officinalisONK7774282.547271.6981cucumis_sativusKGN6236774.786364.9573
A4U43_C02F10070asparagus_officinalisONK7774285.220173.8994populus_trichocarpaPotri.010G057200.1.v4.177.098266.8563
A4U43_C02F10070asparagus_officinalisONK7774284.119572.7987arabidopsis_thalianaAT1G27900.176.428666.1429
A4U43_C02F10070asparagus_officinalisONK7774283.647873.7421brassica_napusCDY1176275.568266.6193
A4U43_C02F10070asparagus_officinalisONK7774283.962374.2138brassica_napusCDX9011275.744766.9504
A4U43_C02F10070asparagus_officinalisONK7774283.962374.0566brassica_junceacds.BjuA08g21620S75.744766.8085
A4U43_C02F10070asparagus_officinalisONK7774285.062974.0566prunus_persicaONI3011877.285767.2857
A4U43_C02F10070asparagus_officinalisONK7774285.062974.0566prunus_dulcisVVA1318377.285767.2857
A4U43_C02F10070asparagus_officinalisONK7774284.43472.1698cajanus_cajanC.cajan_24298.t73.561662.8767
A4U43_C02F10070asparagus_officinalisONK7774253.459145.283malus_domestica_goldenmRNA:MD13G010200083.129670.4156
A4U43_C02F10070asparagus_officinalisONK7774283.018971.3836medicago_truncatulaKEH2056275.753265.1363
A4U43_C02F10070asparagus_officinalisONK7774283.333372.1698lupinus_angustifoliusOIW1800775.606365.4779
A4U43_C02F10070asparagus_officinalisONK7774283.490672.7987phaseolus_vulgarisESW3069876.293166.523
A4U43_C02F10070asparagus_officinalisONK7774284.905773.2704glycine_maxKRH5875177.474966.858
A4U43_C02F10070asparagus_officinalisONK7774283.176172.6415pisum_sativumPsat3g127880.1.cds76.115166.4748
A4U43_C02F10070asparagus_officinalisONK7774283.962372.956vigna_unguiculataVigun03g169500.2.v1.276.724166.6667
A4U43_C02F10070asparagus_officinalisONK7774284.119572.6415vigna_angularisKOM3139376.757566.2841
A4U43_C02F10070asparagus_officinalisONK7774282.389970.5975sesamum_indicumSIN_1018012.t75.179364.4189
A4U43_C02F10070asparagus_officinalisONK7774253.930847.0126capsicum_annuumPHT6851271.014561.9048
A4U43_C02F10070asparagus_officinalisONK7774227.04420.4403capsicum_annuumPHT6851351.190538.6905
A4U43_C02F10070asparagus_officinalisONK7774214.465413.2075helianthus_annuusmRNA:HanXRQr2_Chr17g080162184.403777.0642
A4U43_C02F10070asparagus_officinalisONK7774258.962350.6289helianthus_annuusmRNA:HanXRQr2_Chr17g082914184.269772.3596
A4U43_C02F10070asparagus_officinalisONK7774284.748472.7987lactuca_sativacds-PLY89939.176.890266.0485
A4U43_C02F10070asparagus_officinalisONK7774229.245322.6415solanum_lycopersicumSolyc05g015047.1.152.840940.9091
A4U43_C02F10070asparagus_officinalisONK7774226.257923.4277solanum_lycopersicumSolyc05g015043.1.171.673863.9485
A4U43_C02F10070asparagus_officinalisONK7774284.905774.5283manihot_esculentaOAY3242776.595767.234
A4U43_C02F10070asparagus_officinalisONK7774288.050377.9874avena_sativa_sangAVESA.00010b.r2.4AG0595730.1.CDS79.320170.255
A4U43_C02F10070asparagus_officinalisONK7774287.893177.9874avena_sativa_sangAVESA.00010b.r2.4DG0739690.1.CDS79.178570.255
A4U43_C02F10070asparagus_officinalisONK7774288.364878.1447avena_sativa_sangAVESA.00010b.r2.7CG0690880.1.CDS78.932669.8034
A4U43_C02F10070asparagus_officinalisONK7774287.578677.673lolium_perennecds.KYUSt_chr4.1913578.895269.9717
A4U43_C02F10070asparagus_officinalisONK7774286.949778.1447oryza_brachyanthaOB0041G10020.178.551170.5966
A4U43_C02F10070asparagus_officinalisONK7774287.735878.4591oryza_rufipogonORUFI11G11500.278.813670.4802
A4U43_C02F10070asparagus_officinalisONK7774281.76172.4843oryza_punctataOPUNC11G09900.177.151368.3976
A4U43_C02F10070asparagus_officinalisONK7774281.76172.4843oryza_punctataOPUNC11G09890.177.151368.3976
A4U43_C02F10070asparagus_officinalisONK7774288.364878.1447avena_sativa_ot3098cds.AVESA.00001b.r3.7Cg0001409.777.197868.2692
A4U43_C02F10070asparagus_officinalisONK7774288.050377.8302avena_sativa_ot3098cds.AVESA.00001b.r3.4Ag0000920.472.538964.1192
A4U43_C02F10070asparagus_officinalisONK7774287.893177.9874avena_sativa_ot3098cds.AVESA.00001b.r3.4Dg0001276.176.575367.9452
A4U43_C02F10070asparagus_officinalisONK7774288.993778.7736secale_cerealeSECCE4Rv1G0223420.180.056670.8628
A4U43_C02F10070asparagus_officinalisONK7774287.578678.3019oryza_glaberrimaORGLA11G0093800.178.672370.339
A4U43_C02F10070asparagus_officinalisONK7774227.358522.7987oryza_longistaminataKN539130.1_FGP00372.199260.166
A4U43_C02F10070asparagus_officinalisONK7774228.930826.1006oryza_longistaminataKN539130.1_FGP00673.015965.873
A4U43_C02F10070asparagus_officinalisONK7774288.207678.7736setaria_italicaKQK9444680.028571.4693
A4U43_C02F10070asparagus_officinalisONK7774287.735878.6164sorghum_bicolorEER8795179.148970.922
A4U43_C02F10070asparagus_officinalisONK7774288.207678.7736setaria_viridisTKW0050380.028571.4693
A4U43_C02F10070asparagus_officinalisONK7774289.150978.6164triticum_aestivumTraesCS4B02G075500.180.425570.922
A4U43_C02F10070asparagus_officinalisONK7774288.993778.4591triticum_aestivumTraesCS4D02G074200.180.283770.7801
A4U43_C02F10070asparagus_officinalisONK7774288.993778.1447triticum_aestivumTraesCS4A02G239500.280.283770.4965
A4U43_C02F10070asparagus_officinalisONK7774260.377438.522homo_sapiensENSP0000025124149.29431.4506
A4U43_C02F10070asparagus_officinalisONK7774290.251683.0189ananas_comosusAco003493.1.mrna181.650175.1067
A4U43_C02F10070asparagus_officinalisONK7774288.993778.4591triticum_urartuTuG1812G0400000721.01.T0380.283770.7801
A4U43_C02F10070asparagus_officinalisONK7774285.849176.2579oryza_glumipatulaOGLUM11G10870.275.833367.3611
A4U43_C02F10070asparagus_officinalisONK7774286.006373.8994ipomoea_trilobaitb08g15430.t178.031467.0471
A4U43_C02F10070asparagus_officinalisONK7774287.421478.1447oryza_sativaOs11t0310800-0178.531170.1977
A4U43_C02F10070asparagus_officinalisONK7774269.811360.5346prunus_aviumPav_sc0000351.1_g300.1.mk:mrna74.621864.7059
A4U43_C02F10070asparagus_officinalisONK7774288.050378.3019brachypodium_distachyonKQJ8862479.320170.5382
A4U43_C02F10070asparagus_officinalisONK7774288.993778.4591aegilops_tauschiiAET4Gv20155900.579.382969.986
A4U43_C02F10070asparagus_officinalisONK7774281.446569.1824chenopodium_quinoaAUR62005584-RA:cds73.894462.7675
A4U43_C02F10070asparagus_officinalisONK7774276.886865.566chenopodium_quinoaAUR62024146-RA:cds72.551961.8694
A4U43_C02F10070asparagus_officinalisONK7774283.647872.7987arabis_alpinaKFK4466475.46165.6738
A4U43_C02F10070asparagus_officinalisONK7774285.377475.3145rosa_chinensisPRQ3996277.682468.5265
A4U43_C02F10070asparagus_officinalisONK7774286.792475.9434quercus_lobataQL03p054546:mrna78.857169
A4U43_C02F10070asparagus_officinalisONK7774290.251681.761musa_acuminataMa02_p22850.181.534173.8636
A4U43_C02F10070asparagus_officinalisONK7774286.635274.0566olea_europaeaOE9A079829C278.714367.2857
A4U43_C02F10070asparagus_officinalisONK7774287.578678.4591panicum_halliiPUZ4435775.474367.6152
A4U43_C02F10070asparagus_officinalisONK7774279.402569.1824cynara_cardunculusKVH9785676.981767.0732
A4U43_C02F10070asparagus_officinalisONK7774252.201344.9686nymphaea_colorataNC3G0206400.1:cds74.107163.8393
A4U43_C02F10070asparagus_officinalisONK7774290.880582.5472dioscorea_rotundataDRNTG_11190.182.336274.7863
A4U43_C02F10070asparagus_officinalisONK7774288.679277.3585triticum_turgidumTRITD4Av1G178740.282.215771.7201
A4U43_C02F10070asparagus_officinalisONK7774284.43474.5283triticum_turgidumTRITD4Bv1G025390.479.673670.3264
A4U43_C02F10070asparagus_officinalisONK7774284.119573.4277arabidopsis_hallerig12935.t176.428666.7143
A4U43_C02F10070asparagus_officinalisONK7774222.95617.4528arabidopsis_hallerig01746.t166.972550.9174
A4U43_C02F10070asparagus_officinalisONK7774283.490673.2704eutrema_salsugineumESQ3407375.533466.2873
A4U43_C02F10070asparagus_officinalisONK7774285.691874.6855pistacia_veracds-EVM0024420.177.857167.8571
A4U43_C02F10070asparagus_officinalisONK7774287.578678.3019oryza_indicaBGIOSGA035179-PA78.672370.339
A4U43_C02F10070asparagus_officinalisONK7774279.874266.195kalanchoe_fedtschenkoiKaladp0016s0236.1.v1.1.CDS.172.467960.0571
A4U43_C02F10070asparagus_officinalisONK7774284.591273.8994corymbia_citriodoracds-KAF8018470.176.096266.4781
A4U43_C02F10070asparagus_officinalisONK7774286.163575.4717citrus_clementinaESR5132677.840968.1818
A4U43_C02F10070asparagus_officinalisONK7774283.333371.6981fraxinus_excelsiorFRAEX38873_v2_000381940.1.cds77.485466.6667
A4U43_C02F10070asparagus_officinalisONK7774229.245324.5283echinochloa_crusgalliscaffold303.48.cds81.222768.1223
A4U43_C02F10070asparagus_officinalisONK7774288.050378.6164echinochloa_crusgalliscaffold168.71.cds79.320170.8215
A4U43_C02F10070asparagus_officinalisONK7774288.993778.1447triticum_dicoccoidesTRIDC4BG011700.280.056670.297
A4U43_C02F10070asparagus_officinalisONK7774289.150978.4591triticum_dicoccoidesTRIDC4AG037840.581.465571.6954
A4U43_C02F10070asparagus_officinalisONK7774283.490671.8553trifolium_pratenseTp57577_TGAC_v2_mRNA1769476.183665.5667
A4U43_C02F10070asparagus_officinalisONK777427567.1384brassica_rapa_ro18A08p034290.1_BraROA.175.236667.3502
A4U43_C02F10070asparagus_officinalisONK7774281.918272.327leersia_perrieriLPERR11G08540.170.980962.6703
A4U43_C02F10070asparagus_officinalisONK7774285.220173.5849eucalyptus_grandisKCW6197776.661966.1952
A4U43_C02F10070asparagus_officinalisONK7774286.949777.044actinidia_chinensisPSS1366278.887369.9001
A4U43_C02F10070asparagus_officinalisONK7774283.962374.0566brassica_oleraceaBo3g142940.175.852366.9034
A4U43_C02F10070asparagus_officinalisONK7774285.691875vitis_viniferaVitvi01g01565_P00177.857168.1429
A4U43_C02F10070asparagus_officinalisONK7774277.04468.3962oryza_barthiiOBART11G10890.387.813677.957
A4U43_C02F10070asparagus_officinalisONK7774283.333373.4277camelina_sativaCsa14g035450.164.476956.8127
A4U43_C02F10070asparagus_officinalisONK7774283.333373.4277camelina_sativaCsa03g031120.160.779853.555
A4U43_C02F10070asparagus_officinalisONK7774283.018973.2704camelina_sativaCsa17g037630.175.536566.6667
A4U43_C02F10070asparagus_officinalisONK7774283.018973.5849daucus_carotaKZM8361777.30668.5212
A4U43_C02F10070asparagus_officinalisONK7774288.207678.3019eragrostis_curvulaTVU2571279.461870.5382
A4U43_C02F10070asparagus_officinalisONK7774287.893178.1447eragrostis_curvulaTVU2570176.785768.2692
A4U43_C02F10070asparagus_officinalisONK7774285.377473.7421coffea_canephoraCDP1138476.478966.0563
A4U43_C02F10070asparagus_officinalisONK7774287.106976.8868zea_maysZm00001eb375140_P00478.470369.2635
A4U43_C02F10070asparagus_officinalisONK7774214.465413.3648amborella_trichopodaERN1183689.320482.5243
A4U43_C02F10070asparagus_officinalisONK7774223.113219.4969amborella_trichopodaERN0676381.215568.5083
A4U43_C02F10070asparagus_officinalisONK7774283.490670.4403amborella_trichopodaERN0684275.106163.3663
A4U43_C02F10070asparagus_officinalisONK7774286.635275.7862quercus_subercds-POF12502.178.714368.8571
A4U43_C02F10070asparagus_officinalisONK7774286.47876.7296eragrostis_tefEt_6B_049644.CDS79.136770.2158
A4U43_C02F10070asparagus_officinalisONK7774286.006376.4151eragrostis_tefEt_6A_046294.CDS70.39962.5483
A4U43_C02F10070asparagus_officinalisONK7774286.635275.1572juglans_regiacds.Jr13_13020_p178.714368.2857
A4U43_C02F10070asparagus_officinalisONK7774284.276775oryza_meridionalisOMERI11G09410.181.45972.4924
A4U43_C02F10070asparagus_officinalisONK7774285.377474.6855corylus_avellanaCav04g24990.t136.296831.7513
A4U43_C02F10070asparagus_officinalisONK7774284.276775.3145gossypium_raimondiiKJB3096676.571468.4286
A4U43_C02F10070asparagus_officinalisONK7774289.150978.6164hordeum_vulgareHORVU.MOREX.r3.4HG0341940.180.19870.7214
A4U43_C02F10070asparagus_officinalisONK7774281.603872.956digitaria_exilisDexi8A01G0009660.1:cds73.826566.0028
A4U43_C02F10070asparagus_officinalisONK7774274.528363.8365vigna_radiataVradi07g08080.170.746360.597
A4U43_C02F10070asparagus_officinalisONK7774245.125840.7233oryza_nivaraONIVA11G11000.382.94874.8555

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression