Description

Ensembl ID A4U43_C01F34770 Gene ID Accession -
Symbol Alias - Full Name uncharacterized protein
Status Confidence Length 7460 bases Strand Minus strand
Position 1 : 129475424 - 129482883 RNA binding domain Ribosomal_L13
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ONK81969 Ribosomal_L13 PF00572 3.8e-44 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
A4U43_C01F34770asparagus_officinalisONK7633732.524317.9612asparagus_officinalisONK8196927.916715.4167
A4U43_C01F34770asparagus_officinalisONK6470221.739110.3261asparagus_officinalisONK8196916.66677.91667

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
A4U43_C01F34770asparagus_officinalisONK8196935.416721.6667chondrus_crispusCDF378863420.8
A4U43_C01F34770asparagus_officinalisONK8196952.916740.4167chlamydomonas_reinhardtiiPNW8188056.444443.1111
A4U43_C01F34770asparagus_officinalisONK819697058.3333physcomitrium_patensPp3c20_2980V3.169.709558.0913
A4U43_C01F34770asparagus_officinalisONK8196968.7558.3333physcomitrium_patensPp3c24_18330V3.169.037758.5774
A4U43_C01F34770asparagus_officinalisONK8196969.583357.5physcomitrium_patensPp3c8_22490V3.170.464158.2278
A4U43_C01F34770asparagus_officinalisONK8196969.583357.0833marchantia_polymorphaPTQ4815074.222260.8889
A4U43_C01F34770asparagus_officinalisONK8196963.333354.5833papaver_somniferumRZC5438076.767766.1616
A4U43_C01F34770asparagus_officinalisONK8196970.833363.3333cannabis_sativa_femalecds.evm.model.02.253276.576668.4685
A4U43_C01F34770asparagus_officinalisONK8196978.333368.75ficus_caricaFCD_00029259-RA:cds75.806466.5323
A4U43_C01F34770asparagus_officinalisONK8196972.083361.6667beta_vulgarisKMT1323871.193460.9053
A4U43_C01F34770asparagus_officinalisONK8196976.666766.6667citrullus_lanatusCla97C11G223270.174.193664.5161
A4U43_C01F34770asparagus_officinalisONK8196975.416766.25theobroma_cacaoEOY1347973.577264.6341
A4U43_C01F34770asparagus_officinalisONK8196977.083367.5cucumis_meloMELO3C025669.2.174.596865.3226
A4U43_C01F34770asparagus_officinalisONK8196976.2565.4167cucumis_sativusKGN5503073.790363.3064
A4U43_C01F34770asparagus_officinalisONK8196979.166768.3333populus_trichocarpaPotri.001G384600.1.v4.176.305265.8635
A4U43_C01F34770asparagus_officinalisONK8196979.166768.75populus_trichocarpaPotri.011G106100.1.v4.178.838268.4647
A4U43_C01F34770asparagus_officinalisONK8196976.2565.4167arabidopsis_thalianaAT1G78630.175.933665.1452
A4U43_C01F34770asparagus_officinalisONK8196976.666765.8333brassica_napusCDX8744576.666765.8333
A4U43_C01F34770asparagus_officinalisONK8196975.833365brassica_napusCDX8846122.835619.5734
A4U43_C01F34770asparagus_officinalisONK8196976.2566.25brassica_napusCDY2687275.619865.7025
A4U43_C01F34770asparagus_officinalisONK8196976.2565.8333brassica_napusCDY1460575.308665.0206
A4U43_C01F34770asparagus_officinalisONK8196976.666765.8333brassica_junceacds.BjuA07g37100S76.348565.5602
A4U43_C01F34770asparagus_officinalisONK8196976.2565.4167brassica_junceacds.BjuB03g11220S75.933665.1452
A4U43_C01F34770asparagus_officinalisONK8196976.2565.8333brassica_junceacds.BjuB05g01560S75.308665.0206
A4U43_C01F34770asparagus_officinalisONK8196943.7533.3333brassica_junceacds.BjuB05g01550S70.945954.0541
A4U43_C01F34770asparagus_officinalisONK8196976.2566.25brassica_junceacds.BjuA02g19580S75.619865.7025
A4U43_C01F34770asparagus_officinalisONK8196976.2565.8333prunus_persicaONI1231871.484461.7188
A4U43_C01F34770asparagus_officinalisONK8196977.083365.8333prunus_dulcisVVA1895472.265661.7188
A4U43_C01F34770asparagus_officinalisONK8196970.833361.6667cajanus_cajanC.cajan_22012.t70.539461.4108
A4U43_C01F34770asparagus_officinalisONK8196975.833365.4167malus_domestica_goldenmRNA:MD03G020460062.758654.1379
A4U43_C01F34770asparagus_officinalisONK8196976.2565.4167malus_domestica_goldenmRNA:MD11G021860070.656460.6178
A4U43_C01F34770asparagus_officinalisONK8196973.333363.75medicago_truncatulaKEH1938473.333363.75
A4U43_C01F34770asparagus_officinalisONK8196971.2561.25lupinus_angustifoliusOIV9902066.279156.9767
A4U43_C01F34770asparagus_officinalisONK8196971.666762.0833phaseolus_vulgarisESW0529671.369361.8257
A4U43_C01F34770asparagus_officinalisONK8196970.416761.6667glycine_maxKRH1297469.547360.9053
A4U43_C01F34770asparagus_officinalisONK8196973.7562.0833pisum_sativumPsat4g140640.1.cds73.140561.5702
A4U43_C01F34770asparagus_officinalisONK8196973.333364.1667vigna_unguiculataVigun11g045100.1.v1.273.333364.1667
A4U43_C01F34770asparagus_officinalisONK8196962.083353.75vigna_angularisKOM4944161.316953.0864
A4U43_C01F34770asparagus_officinalisONK8196962.083353.75vigna_angularisKOM4944361.316953.0864
A4U43_C01F34770asparagus_officinalisONK8196974.166763.3333sesamum_indicumSIN_1019419.t76.068464.9573
A4U43_C01F34770asparagus_officinalisONK8196977.083367.9167capsicum_annuumPHT7305077.405968.2008
A4U43_C01F34770asparagus_officinalisONK8196979.166769.5833capsicum_annuumPHT7700680.851171.0638
A4U43_C01F34770asparagus_officinalisONK8196971.666762.9167helianthus_annuusmRNA:HanXRQr2_Chr13g056937179.629669.9074
A4U43_C01F34770asparagus_officinalisONK819697566.25helianthus_annuusmRNA:HanXRQr2_Chr03g011433177.922168.8312
A4U43_C01F34770asparagus_officinalisONK8196975.416765.4167lactuca_sativacds-PLY95463.176.371366.2447
A4U43_C01F34770asparagus_officinalisONK819697566.25solanum_tuberosumPGSC0003DMT40003982378.602669.4323
A4U43_C01F34770asparagus_officinalisONK8196977.083366.6667solanum_tuberosumPGSC0003DMT40001819879.059868.3761
A4U43_C01F34770asparagus_officinalisONK8196975.416766.25solanum_lycopersicumSolyc12g014395.1.173.577264.6341
A4U43_C01F34770asparagus_officinalisONK8196977.083366.6667solanum_lycopersicumSolyc07g062190.3.174.898864.7773
A4U43_C01F34770asparagus_officinalisONK8196980.416769.1667manihot_esculentaOAY2883278.137667.2065
A4U43_C01F34770asparagus_officinalisONK8196972.083362.9167avena_sativa_sangAVESA.00010b.r2.3DG0549620.1.CDS75.545965.9389
A4U43_C01F34770asparagus_officinalisONK8196972.083362.9167avena_sativa_sangAVESA.00010b.r2.3AG0448630.1.CDS75.545965.9389
A4U43_C01F34770asparagus_officinalisONK8196972.083362.5avena_sativa_sangAVESA.00010b.r2.3CG0502460.1.CDS75.545965.5022
A4U43_C01F34770asparagus_officinalisONK8196972.083362.9167lolium_perennecds.KYUSt_chr3.3059475.545965.9389
A4U43_C01F34770asparagus_officinalisONK8196962.916758.3333oryza_brachyanthaOB01G39780.189.88183.3333
A4U43_C01F34770asparagus_officinalisONK8196973.333364.1667oryza_punctataOPUNC01G15920.176.521766.9565
A4U43_C01F34770asparagus_officinalisONK8196972.083362.9167avena_sativa_ot3098cds.AVESA.00001b.r3.3Ag0002156.175.545965.9389
A4U43_C01F34770asparagus_officinalisONK8196972.083362.9167avena_sativa_ot3098cds.AVESA.00001b.r3.3Dg0001701.275.545965.9389
A4U43_C01F34770asparagus_officinalisONK8196972.562.9167secale_cerealeSECCE3Rv1G0187170.175.982565.9389
A4U43_C01F34770asparagus_officinalisONK8196972.916763.75oryza_glaberrimaORGLA01G0253100.177.092567.4009
A4U43_C01F34770asparagus_officinalisONK8196972.560.4167oryza_longistaminataKN539095.1_FGP00834.25228.5433
A4U43_C01F34770asparagus_officinalisONK8196973.333365.8333setaria_italicaKQL0698176.855968.9956
A4U43_C01F34770asparagus_officinalisONK8196971.666764.5833sorghum_bicolorEES0147875.109267.6856
A4U43_C01F34770asparagus_officinalisONK8196972.916765.4167setaria_viridisTKW1676976.419268.559
A4U43_C01F34770asparagus_officinalisONK8196972.562.9167triticum_aestivumTraesCS3A02G272200.175.982565.9389
A4U43_C01F34770asparagus_officinalisONK8196972.916762.9167triticum_aestivumTraesCS3D02G271800.176.419265.9389
A4U43_C01F34770asparagus_officinalisONK8196972.562.9167triticum_aestivumTraesCS3B02G306000.175.982565.9389
A4U43_C01F34770asparagus_officinalisONK8196978.7570ananas_comosusAco006030.1.mrna175.903667.4699
A4U43_C01F34770asparagus_officinalisONK8196972.562.9167triticum_urartuTuG1812G0300003182.01.T0175.982565.9389
A4U43_C01F34770asparagus_officinalisONK8196974.583365.4167ipomoea_trilobaitb01g20100.t178.508868.8596
A4U43_C01F34770asparagus_officinalisONK8196974.583365.4167oryza_sativaOs01t0749200-0176.82467.382
A4U43_C01F34770asparagus_officinalisONK8196977.083365.8333prunus_aviumPav_sc0000352.1_g040.1.mk:mrna72.265661.7188
A4U43_C01F34770asparagus_officinalisONK8196973.333364.1667brachypodium_distachyonKQK0973476.855967.2489
A4U43_C01F34770asparagus_officinalisONK8196972.562.9167aegilops_tauschiiAET3Gv20651400.169.879560.6426
A4U43_C01F34770asparagus_officinalisONK8196971.666759.5833chenopodium_quinoaAUR62039507-RA:cds69.918758.1301
A4U43_C01F34770asparagus_officinalisONK8196971.666760chenopodium_quinoaAUR62019642-RA:cds69.918758.5366
A4U43_C01F34770asparagus_officinalisONK8196977.083366.6667arabis_alpinaKFK4223677.083366.6667
A4U43_C01F34770asparagus_officinalisONK8196975.416764.5833rosa_chinensisPRQ3089569.615459.6154
A4U43_C01F34770asparagus_officinalisONK8196978.7568.75nicotiana_attenuataOIT2779578.423268.4647
A4U43_C01F34770asparagus_officinalisONK8196980.416770quercus_lobataQL08p024701:mrna37.843132.9412
A4U43_C01F34770asparagus_officinalisONK8196979.166771.25musa_acuminataMa09_p00010.175.098867.5889
A4U43_C01F34770asparagus_officinalisONK8196973.7561.25olea_europaeaOE9A105727C174.369861.7647
A4U43_C01F34770asparagus_officinalisONK8196973.7561.6667olea_europaeaOE9A029180C174.369862.1849
A4U43_C01F34770asparagus_officinalisONK8196972.561.25olea_europaeaOE9A042098C173.109261.7647
A4U43_C01F34770asparagus_officinalisONK8196974.166766.25panicum_halliiPUZ5478577.729369.4323
A4U43_C01F34770asparagus_officinalisONK8196976.666767.0833cynara_cardunculusKVI0214264.788756.6901
A4U43_C01F34770asparagus_officinalisONK8196978.7569.5833nymphaea_colorataNC1G0180870.1:cds77.45968.4426
A4U43_C01F34770asparagus_officinalisONK8196976.666769.1667dioscorea_rotundataDRNTG_28668.180.701872.807
A4U43_C01F34770asparagus_officinalisONK8196969.583358.75triticum_turgidumTRITD3Av1G181250.32521.1078
A4U43_C01F34770asparagus_officinalisONK8196972.562.9167triticum_turgidumTRITD3Bv1G163760.175.982565.9389
A4U43_C01F34770asparagus_officinalisONK8196975.833364.1667arabidopsis_hallerig01423.t175.518763.9004
A4U43_C01F34770asparagus_officinalisONK8196976.2565eutrema_salsugineumESQ2725476.2565
A4U43_C01F34770asparagus_officinalisONK8196977.083368.75pistacia_veracds-EVM0025671.178.059169.6203
A4U43_C01F34770asparagus_officinalisONK8196974.583365.4167oryza_indicaBGIOSGA004458-PA76.82467.382
A4U43_C01F34770asparagus_officinalisONK819697569.5833kalanchoe_fedtschenkoiKaladp0095s0065.1.v1.171.713266.5339
A4U43_C01F34770asparagus_officinalisONK8196967.083357.0833saccharum_spontaneumSspon.03G0005460-1A-mRNA-1:cds60.074651.1194
A4U43_C01F34770asparagus_officinalisONK8196972.083364.5833saccharum_spontaneumSspon.03G0005460-2D-mRNA-1:cds75.545967.6856
A4U43_C01F34770asparagus_officinalisONK8196976.666765.4167corymbia_citriodoracds-KAF8024396.177.637166.2447
A4U43_C01F34770asparagus_officinalisONK8196973.7567.5citrus_clementinaESR5471272.244966.1225
A4U43_C01F34770asparagus_officinalisONK8196974.166762.5fraxinus_excelsiorFRAEX38873_v2_000074800.2.cds75.105563.2911
A4U43_C01F34770asparagus_officinalisONK8196964.166757.9167fraxinus_excelsiorFRAEX38873_v2_000070280.1.cds90.058581.2866
A4U43_C01F34770asparagus_officinalisONK8196974.583366.6667echinochloa_crusgalliscaffold15.646.cds78.165969.869
A4U43_C01F34770asparagus_officinalisONK8196974.166765.8333echinochloa_crusgalliscaffold89.88.cds77.729368.9956
A4U43_C01F34770asparagus_officinalisONK8196974.583366.25echinochloa_crusgalliscaffold171.141.cds78.165969.4323
A4U43_C01F34770asparagus_officinalisONK8196950.416735.8333ostreococcus_lucimarinusABO9668755.504639.4495
A4U43_C01F34770asparagus_officinalisONK8196972.562.9167triticum_dicoccoidesTRIDC3AG040510.169.322760.1594
A4U43_C01F34770asparagus_officinalisONK8196972.562.9167triticum_dicoccoidesTRIDC3BG045640.175.982565.9389
A4U43_C01F34770asparagus_officinalisONK8196975.833365.4167trifolium_pratenseTp57577_TGAC_v2_mRNA1704176.470665.9664
A4U43_C01F34770asparagus_officinalisONK8196976.666766.6667brassica_rapa_ro18A02p030580.1_BraROA.176.033166.1157
A4U43_C01F34770asparagus_officinalisONK8196976.666765.8333brassica_rapa_ro18A07p050870.1_BraROA.176.348565.5602
A4U43_C01F34770asparagus_officinalisONK8196974.166765.8333leersia_perrieriLPERR01G26470.176.724168.1034
A4U43_C01F34770asparagus_officinalisONK8196977.916767.5eucalyptus_grandisKCW6761177.916767.5
A4U43_C01F34770asparagus_officinalisONK8196977.563.75actinidia_chinensisPSS0593179.828365.6652
A4U43_C01F34770asparagus_officinalisONK8196976.2565.4167brassica_oleraceaBo2g093560.175.619864.876
A4U43_C01F34770asparagus_officinalisONK8196975.833365brassica_oleraceaBo6g122170.122.835619.5734
A4U43_C01F34770asparagus_officinalisONK8196977.916767.9167vitis_viniferaVitvi19g00038_P00179.574569.3617
A4U43_C01F34770asparagus_officinalisONK8196975.833364.5833arabidopsis_lyratafgenesh2_kg.2__2158__AT1G78630.175.206664.0496
A4U43_C01F34770asparagus_officinalisONK8196974.583365.4167oryza_barthiiOBART01G30870.176.82467.382
A4U43_C01F34770asparagus_officinalisONK8196976.666765.8333camelina_sativaCsa09g092730.177.310966.3866
A4U43_C01F34770asparagus_officinalisONK8196975.833365.4167camelina_sativaCsa16g048190.174.897164.6091
A4U43_C01F34770asparagus_officinalisONK8196975.416765.4167camelina_sativaCsa07g057630.175.416765.4167
A4U43_C01F34770asparagus_officinalisONK8196977.083367.5daucus_carotaKZM9636875.819766.3934
A4U43_C01F34770asparagus_officinalisONK8196977.083367.5daucus_carotaKZM9637075.819766.3934
A4U43_C01F34770asparagus_officinalisONK8196973.333362.5eragrostis_curvulaTVU3511458.666750
A4U43_C01F34770asparagus_officinalisONK819698072.9167coffea_canephoraCDP060498072.9167
A4U43_C01F34770asparagus_officinalisONK8196935.416725.8333cyanidioschyzon_merolaeCMH224CT37.610627.4336
A4U43_C01F34770asparagus_officinalisONK819697567.5amborella_trichopodaERN1809376.271268.6441
A4U43_C01F34770asparagus_officinalisONK8196979.583369.5833quercus_subercds-POE67824.179.583369.5833
A4U43_C01F34770asparagus_officinalisONK8196936.2525galdieria_sulphurariaEME2793635.802524.6914
A4U43_C01F34770asparagus_officinalisONK8196935.416724.1667saccharomyces_cerevisiaeYOR150W52.147235.5828
A4U43_C01F34770asparagus_officinalisONK8196973.7564.1667eragrostis_tefEt_3B_029369.CDS77.973667.8414
A4U43_C01F34770asparagus_officinalisONK8196974.166764.5833eragrostis_tefEt_3A_024976.CDS78.414168.2819
A4U43_C01F34770asparagus_officinalisONK819698069.5833juglans_regiacds.Jr09_12960_p178.688568.4426
A4U43_C01F34770asparagus_officinalisONK8196974.583365.4167oryza_meridionalisOMERI01G27990.176.82467.382
A4U43_C01F34770asparagus_officinalisONK8196975.416768.3333corchorus_capsularisOMO7467874.180367.2131
A4U43_C01F34770asparagus_officinalisONK8196977.916768.75gossypium_raimondiiKJB1272176.639367.6229
A4U43_C01F34770asparagus_officinalisONK8196977.916769.1667gossypium_raimondiiKJB8207876.016367.4797
A4U43_C01F34770asparagus_officinalisONK8196967.554.5833chara_brauniiGBG6724559.340747.9853
A4U43_C01F34770asparagus_officinalisONK8196964.166751.6667digitaria_exilisDexi5B01G0026030.1:cds44.89836.1516
A4U43_C01F34770asparagus_officinalisONK8196974.583366.25digitaria_exilisDexi5A01G0026970.1:cds78.165969.4323
A4U43_C01F34770asparagus_officinalisONK8196974.583366.6667digitaria_exilisDexi5B01G0027190.1:cds78.165969.869
A4U43_C01F34770asparagus_officinalisONK8196971.666762.0833vigna_radiataVradi02g11440.171.666762.0833

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression