Description

Ensembl ID A4U43_C01F29510 Gene ID Accession -
Symbol Alias - Full Name uncharacterized protein
Status Confidence Length 3504 bases Strand Minus strand
Position 1 : 116076879 - 116080382 RNA binding domain RNA_pol_Rpb2_7 , RNA_pol_Rpb2_6
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ONK81474 RNA_pol_Rpb2_7 PF04560 5.4e-26 1
ONK81474 RNA_pol_Rpb2_6 PF00562 3.2e-06 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
A4U43_C01F29510asparagus_officinalisONK739428.629445.38071asparagus_officinalisONK8147444.736827.8947
A4U43_C01F29510asparagus_officinalisONK736338.387625.70033asparagus_officinalisONK8147454.210536.8421
A4U43_C01F29510asparagus_officinalisONK814753.1251.61638asparagus_officinalisONK8147415.26327.89474
A4U43_C01F29510asparagus_officinalisONK737478.003684.8758asparagus_officinalisONK8147445.789527.8947

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
A4U43_C01F29510asparagus_officinalisONK8147445.789528.4211physcomitrium_patensPp3c15_16480V3.17.016134.35484
A4U43_C01F29510asparagus_officinalisONK8147445.263226.3158physcomitrium_patensPp3c4_16140V3.36.782333.94322
A4U43_C01F29510asparagus_officinalisONK8147447.368430marchantia_polymorphaPTQ373435.758163.64683
A4U43_C01F29510asparagus_officinalisONK814742.631582.10526papaver_somniferumRZC726351.547991.23839
A4U43_C01F29510asparagus_officinalisONK8147447.368428.4211cannabis_sativa_femalecds.evm.model.01.27447.81254.6875
A4U43_C01F29510asparagus_officinalisONK8147415.26329.47368cannabis_sativa_femalecds.evm.model.08.16684.538342.8169
A4U43_C01F29510asparagus_officinalisONK8147445.263225.7895ficus_caricaFCD_00016345-RA:cds8.875135.05676
A4U43_C01F29510asparagus_officinalisONK8147447.368429.4737beta_vulgarisKMT181227.444174.63193
A4U43_C01F29510asparagus_officinalisONK8147447.368429.4737citrullus_lanatusCla97C05G097280.17.531384.68619
A4U43_C01F29510asparagus_officinalisONK8147446.842128.9474theobroma_cacaoEOY293367.516894.64527
A4U43_C01F29510asparagus_officinalisONK8147447.368428.4211cucumis_meloMELO3C016960.2.17.51884.51128
A4U43_C01F29510asparagus_officinalisONK8147447.368427.8947cucumis_sativusKGN554297.51884.42774
A4U43_C01F29510asparagus_officinalisONK8147447.368427.3684populus_trichocarpaPotri.018G019100.1.v4.17.550344.36242
A4U43_C01F29510asparagus_officinalisONK8147426.842118.4211populus_trichocarpaPotri.006G263900.2.v4.119.691113.5135
A4U43_C01F29510asparagus_officinalisONK8147446.315828.9474arabidopsis_thalianaAT3G23780.27.508534.69283
A4U43_C01F29510asparagus_officinalisONK8147446.842129.4737arabidopsis_thalianaAT3G18090.18.436025.30806
A4U43_C01F29510asparagus_officinalisONK814742015.2632brassica_napusCDY1849628.571421.8045
A4U43_C01F29510asparagus_officinalisONK8147411.57895.26316brassica_napusCDY704832.879581.3089
A4U43_C01F29510asparagus_officinalisONK8147434.736823.6842brassica_napusCDY7136446.808531.9149
A4U43_C01F29510asparagus_officinalisONK8147446.842128.9474brassica_napusCDX921937.613344.70488
A4U43_C01F29510asparagus_officinalisONK8147420.526315.7895brassica_junceacds.BjuB01g15090S36.792528.3019
A4U43_C01F29510asparagus_officinalisONK8147446.842128.9474brassica_junceacds.BjuA05g27260S7.587384.68883
A4U43_C01F29510asparagus_officinalisONK8147446.842129.4737brassica_junceacds.BjuB01g11830S7.613344.79042
A4U43_C01F29510asparagus_officinalisONK814742015.2632brassica_junceacds.BjuA01g09530S65.517250
A4U43_C01F29510asparagus_officinalisONK8147448.421128.9474prunus_persicaONI329137.666674.58333
A4U43_C01F29510asparagus_officinalisONK8147448.421128.9474prunus_dulcisVVA116087.666674.58333
A4U43_C01F29510asparagus_officinalisONK8147445.789529.4737cajanus_cajanC.cajan_32188.t7.372884.74576
A4U43_C01F29510asparagus_officinalisONK8147446.842128.9474malus_domestica_goldenmRNA:MD08G00492007.472714.61797
A4U43_C01F29510asparagus_officinalisONK8147446.842128.4211malus_domestica_goldenmRNA:MD15G00353007.472714.53401
A4U43_C01F29510asparagus_officinalisONK8147447.368430medicago_truncatulaAES735467.575764.79798
A4U43_C01F29510asparagus_officinalisONK8147424.736816.8421medicago_truncatulaKEH4011815.719110.7023
A4U43_C01F29510asparagus_officinalisONK814743.157892.63158medicago_truncatulaKEH164231.160540.967118
A4U43_C01F29510asparagus_officinalisONK8147446.315829.4737lupinus_angustifoliusOIW149737.327234.66278
A4U43_C01F29510asparagus_officinalisONK8147446.315829.4737lupinus_angustifoliusOIV964567.108244.52343
A4U43_C01F29510asparagus_officinalisONK8147445.789528.4211phaseolus_vulgarisESW089367.237944.49251
A4U43_C01F29510asparagus_officinalisONK8147446.315829.4737glycine_maxKRH616637.30294.6473
A4U43_C01F29510asparagus_officinalisONK8147446.315829.4737glycine_maxKRH523267.30294.6473
A4U43_C01F29510asparagus_officinalisONK8147447.368429.4737pisum_sativumPsat5g032960.1.cds7.512524.67446
A4U43_C01F29510asparagus_officinalisONK8147446.315828.9474vigna_unguiculataVigun09g215700.1.v1.27.327234.57952
A4U43_C01F29510asparagus_officinalisONK8147446.315828.9474vigna_angularisKOM420687.345584.59098
A4U43_C01F29510asparagus_officinalisONK8147447.894728.9474sesamum_indicumSIN_1021623.t7.539354.55675
A4U43_C01F29510asparagus_officinalisONK8147437.894725.7895sesamum_indicumSIN_1021619.t29.387820
A4U43_C01F29510asparagus_officinalisONK814744.210532.63158sesamum_indicumSIN_1018144.t.cds13.809522.38095
A4U43_C01F29510asparagus_officinalisONK8147446.842128.4211capsicum_annuumPHT879147.313074.43714
A4U43_C01F29510asparagus_officinalisONK8147446.315827.3684capsicum_annuumPHT931097.213114.2623
A4U43_C01F29510asparagus_officinalisONK8147446.842130helianthus_annuusmRNA:HanXRQr2_Chr15g07049417.416674.75
A4U43_C01F29510asparagus_officinalisONK8147445.789527.3684helianthus_annuusmRNA:HanXRQr2_Chr14g06625017.532474.50216
A4U43_C01F29510asparagus_officinalisONK8147446.842130helianthus_annuusmRNA:HanXRQr2_Chr11g04670317.422854.75396
A4U43_C01F29510asparagus_officinalisONK8147445.789529.4737lactuca_sativacds-PLY83453.17.219924.6473
A4U43_C01F29510asparagus_officinalisONK8147422.105310.5263lactuca_sativacds-PLY69872.110.93755.20833
A4U43_C01F29510asparagus_officinalisONK8147443.157926.8421lactuca_sativacds-PLY89966.112.51917.78626
A4U43_C01F29510asparagus_officinalisONK8147436.315824.7368solanum_tuberosumPGSC0003DMT40003946728.278719.2623
A4U43_C01F29510asparagus_officinalisONK8147446.842127.8947solanum_tuberosumPGSC0003DMT4000793357.097294.22648
A4U43_C01F29510asparagus_officinalisONK8147446.842128.4211solanum_lycopersicumSolyc03g110885.1.17.343234.45545
A4U43_C01F29510asparagus_officinalisONK8147446.315827.8947solanum_lycopersicumSolyc08g075940.3.17.219034.34783
A4U43_C01F29510asparagus_officinalisONK8147447.368427.8947manihot_esculentaOAY535997.468884.39834
A4U43_C01F29510asparagus_officinalisONK8147447.368427.8947manihot_esculentaOAY274847.475084.40199
A4U43_C01F29510asparagus_officinalisONK8147400lolium_perennecds.KYUSt_chr3.924600
A4U43_C01F29510asparagus_officinalisONK8147432.631620.5263ipomoea_trilobaitb03g26390.t15.410123.40314
A4U43_C01F29510asparagus_officinalisONK8147447.894729.4737ipomoea_trilobaitb06g03200.t17.495884.61285
A4U43_C01F29510asparagus_officinalisONK8147448.421128.9474prunus_aviumPav_sc0000890.1_g410.1.mk:mrna7.666674.58333
A4U43_C01F29510asparagus_officinalisONK8147447.368428.9474chenopodium_quinoaAUR62038757-RA:cds7.506264.58716
A4U43_C01F29510asparagus_officinalisONK8147447.368429.4737chenopodium_quinoaAUR62020625-RA:cds7.860264.89083
A4U43_C01F29510asparagus_officinalisONK8147446.842129.4737chenopodium_quinoaAUR62009365-RA:cds7.379774.64345
A4U43_C01F29510asparagus_officinalisONK8147447.894730arabis_alpinaKFK442707.751284.8552
A4U43_C01F29510asparagus_officinalisONK814742.631581.05263rosa_chinensisPRQ320661.992030.796813
A4U43_C01F29510asparagus_officinalisONK8147444.736826.3158rosa_chinensisPRQ320698.891215.23013
A4U43_C01F29510asparagus_officinalisONK8147446.315827.8947rosa_chinensisPRQ467787.321134.40932
A4U43_C01F29510asparagus_officinalisONK814743.157892.10526rosa_chinensisPRQ320644.166672.77778
A4U43_C01F29510asparagus_officinalisONK814744.210531.05263rosa_chinensisPRQ320651.860470.465116
A4U43_C01F29510asparagus_officinalisONK8147446.842127.8947nicotiana_attenuataOIT086887.307064.3514
A4U43_C01F29510asparagus_officinalisONK8147447.368427.8947quercus_lobataQL02p018902:mrna7.544014.44258
A4U43_C01F29510asparagus_officinalisONK8147420.526315.2632olea_europaeaOE9A017468C121.787716.2011
A4U43_C01F29510asparagus_officinalisONK8147444.210528.9474olea_europaeaOE9A111528C19.75616.38792
A4U43_C01F29510asparagus_officinalisONK8147447.894730cynara_cardunculusKVI068857.422514.64927
A4U43_C01F29510asparagus_officinalisONK8147444.210526.8421cynara_cardunculusKVI097777.977214.8433
A4U43_C01F29510asparagus_officinalisONK8147447.368425.7895nymphaea_colorataNC2G0034260.1:cds7.358954.00654
A4U43_C01F29510asparagus_officinalisONK8147446.842128.9474arabidopsis_hallerig21551.t17.613344.70488
A4U43_C01F29510asparagus_officinalisONK8147446.842129.4737arabidopsis_hallerig24014.t17.183214.51977
A4U43_C01F29510asparagus_officinalisONK8147447.368429.4737eutrema_salsugineumESQ481067.698894.79042
A4U43_C01F29510asparagus_officinalisONK8147447.894728.4211pistacia_veracds-EVM0016412.17.711864.57627
A4U43_C01F29510asparagus_officinalisONK8147446.315828.9474kalanchoe_fedtschenkoiKaladp0042s0363.1.v1.17.315054.5719
A4U43_C01F29510asparagus_officinalisONK8147447.894728.9474corymbia_citriodoracds-KAF8033533.17.634234.61409
A4U43_C01F29510asparagus_officinalisONK814744.736840corymbia_citriodoracds-KAF7846371.11.204820
A4U43_C01F29510asparagus_officinalisONK8147447.894729.4737corymbia_citriodoracds-KAF8033642.17.602344.67836
A4U43_C01F29510asparagus_officinalisONK8147448.947428.9474citrus_clementinaESR561237.762944.59098
A4U43_C01F29510asparagus_officinalisONK8147435.789522.6316fraxinus_excelsiorFRAEX38873_v2_000318750.1.cds6.028373.81206
A4U43_C01F29510asparagus_officinalisONK8147447.368430fraxinus_excelsiorFRAEX38873_v2_000039490.2.cds7.544014.77787
A4U43_C01F29510asparagus_officinalisONK8147446.315829.4737trifolium_pratenseTp57577_TGAC_v2_mRNA18968.021885.10483
A4U43_C01F29510asparagus_officinalisONK8147448.421128.4211brassica_rapa_ro18A05p041350.1_BraROA.13.484852.04545
A4U43_C01F29510asparagus_officinalisONK814743.157891.57895leersia_perrieriLPERR10G02480.11.401870.700935
A4U43_C01F29510asparagus_officinalisONK8147447.368429.4737eucalyptus_grandisKCW786027.575764.7138
A4U43_C01F29510asparagus_officinalisONK8147447.368428.9474actinidia_chinensisPSS010767.352944.49346
A4U43_C01F29510asparagus_officinalisONK814743.157891.05263brassica_oleraceaBo23552s010.16.382982.12766
A4U43_C01F29510asparagus_officinalisONK814747.368423.15789brassica_oleraceaBo01983s010.11.837270.787402
A4U43_C01F29510asparagus_officinalisONK8147441.578925.2632brassica_oleraceaBo00679s040.111.46596.96662
A4U43_C01F29510asparagus_officinalisONK8147425.263219.4737brassica_oleraceaBo20879s010.146.601935.9223
A4U43_C01F29510asparagus_officinalisONK814745.263163.68421brassica_oleraceaBo5g121240.11.70941.19658
A4U43_C01F29510asparagus_officinalisONK814743.157892.10526brassica_oleraceaBo02844s010.11.744191.16279
A4U43_C01F29510asparagus_officinalisONK8147446.315828.9474vitis_viniferaVitvi04g01927_P0017.502134.68883
A4U43_C01F29510asparagus_officinalisONK8147446.842128.9474arabidopsis_lyratascaffold_302132.17.613344.70488
A4U43_C01F29510asparagus_officinalisONK8147436.315825.7895arabidopsis_lyratascaffold_302885.113.66349.70297
A4U43_C01F29510asparagus_officinalisONK8147444.210528.4211camelina_sativaCsa19g035400.111.02367.08661
A4U43_C01F29510asparagus_officinalisONK8147446.842130camelina_sativaCsa01g029400.17.632934.88851
A4U43_C01F29510asparagus_officinalisONK8147446.842130camelina_sativaCsa19g035960.18.076235.17241
A4U43_C01F29510asparagus_officinalisONK8147444.736827.8947camelina_sativaCsa01g030010.16.933124.323
A4U43_C01F29510asparagus_officinalisONK8147443.157927.3684camelina_sativaCsa19g025340.17.231044.58554
A4U43_C01F29510asparagus_officinalisONK8147446.315829.4737camelina_sativaCsa15g046940.17.553654.80687
A4U43_C01F29510asparagus_officinalisONK8147446.842130camelina_sativaCsa15g048580.15.100293.26648
A4U43_C01F29510asparagus_officinalisONK8147443.684228.9474camelina_sativaCsa15g024470.18.341715.52764
A4U43_C01F29510asparagus_officinalisONK8147445.263230daucus_carotaKZN104537.312934.84694
A4U43_C01F29510asparagus_officinalisONK8147447.368430.5263daucus_carotaKZN011947.633594.91942
A4U43_C01F29510asparagus_officinalisONK8147443.157925.2632daucus_carotaKZM897795.28353.09278
A4U43_C01F29510asparagus_officinalisONK8147400eragrostis_curvulaTVU0621600
A4U43_C01F29510asparagus_officinalisONK8147400eragrostis_curvulaTVU0621500
A4U43_C01F29510asparagus_officinalisONK8147447.894728.9474coffea_canephoraCDP096777.502064.53421
A4U43_C01F29510asparagus_officinalisONK8147447.894727.8947coffea_canephoraCDP071727.398374.30894
A4U43_C01F29510asparagus_officinalisONK8147441.578927.8947selaginella_moellendorffiiEFJ290087.86075.27363
A4U43_C01F29510asparagus_officinalisONK8147443.684225.2632selaginella_moellendorffiiEFJ0988310.83556.26632
A4U43_C01F29510asparagus_officinalisONK8147442.105328.4211selaginella_moellendorffiiEFJ137108.421055.68421
A4U43_C01F29510asparagus_officinalisONK8147444.210525.2632selaginella_moellendorffiiEFJ1530011.02366.29921
A4U43_C01F29510asparagus_officinalisONK8147446.842130amborella_trichopodaERM943697.289114.6683
A4U43_C01F29510asparagus_officinalisONK8147447.368427.8947quercus_subercds-POE51465.16.139153.61528
A4U43_C01F29510asparagus_officinalisONK8147446.842128.9474juglans_regiacds.Jr11_30260_p17.472714.61797
A4U43_C01F29510asparagus_officinalisONK8147439.473724.7368corchorus_capsularisOMO7567917.32110.8545
A4U43_C01F29510asparagus_officinalisONK8147442.105327.8947corchorus_capsularisOMO592794.125842.73337
A4U43_C01F29510asparagus_officinalisONK8147445.263228.4211corchorus_capsularisOMO615775.886383.6961
A4U43_C01F29510asparagus_officinalisONK814744.736843.15789corchorus_capsularisOMO756801.367780.911854
A4U43_C01F29510asparagus_officinalisONK8147446.315828.9474gossypium_raimondiiKJB076927.308974.56811
A4U43_C01F29510asparagus_officinalisONK814746.315792.10526chara_brauniiGBG745682.489630.829876
A4U43_C01F29510asparagus_officinalisONK8147415.263211.0526vigna_radiataVradi05g10980.111.55388.36653
A4U43_C01F29510asparagus_officinalisONK8147413.15795.26316vigna_radiataVradi05g11000.13.059981.22399

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression