Description

Ensembl ID A4U43_C01F2160 Gene ID Accession -
Symbol Alias - Full Name uncharacterized protein
Status Confidence Length 2424 bases Strand Minus strand
Position 1 : 3193364 - 3195787 RNA binding domain RRM_1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ONK79031 RRM_1 PF00076 2.7e-41 1
ONK79031 RRM_1 PF00076 2.7e-41 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
A4U43_C01F2160asparagus_officinalisONK716958.87644.60674asparagus_officinalisONK7903131.474116.3347
A4U43_C01F2160asparagus_officinalisONK7215414.72178.07899asparagus_officinalisONK7903132.669317.9283
A4U43_C01F2160asparagus_officinalisONK7343110.38194.77327asparagus_officinalisONK7903134.661415.9363
A4U43_C01F2160asparagus_officinalisONK6463711.61835.80913asparagus_officinalisONK7903133.466116.7331
A4U43_C01F2160asparagus_officinalisONK6463412.82057.17949asparagus_officinalisONK790319.960165.57769
A4U43_C01F2160asparagus_officinalisONK7960529.629613.5802asparagus_officinalisONK7903128.685313.1474
A4U43_C01F2160asparagus_officinalisONK7073531.219513.6585asparagus_officinalisONK7903125.49811.1554
A4U43_C01F2160asparagus_officinalisONK7608426.50616.2651asparagus_officinalisONK7903117.529910.757
A4U43_C01F2160asparagus_officinalisONK7450834.883723.2558asparagus_officinalisONK7903111.95227.96813
A4U43_C01F2160asparagus_officinalisONK6390529.943518.0791asparagus_officinalisONK7903121.115512.749
A4U43_C01F2160asparagus_officinalisONK6231330.674818.4049asparagus_officinalisONK7903119.920311.9522
A4U43_C01F2160asparagus_officinalisONK5829040.192924.7588asparagus_officinalisONK7903149.800830.6773
A4U43_C01F2160asparagus_officinalisONK7763947.395829.1667asparagus_officinalisONK7903136.25522.3108
A4U43_C01F2160asparagus_officinalisONK6527334.441122.0544asparagus_officinalisONK7903145.418329.0837
A4U43_C01F2160asparagus_officinalisONK7542741.155225.9928asparagus_officinalisONK7903145.418328.6853
A4U43_C01F2160asparagus_officinalisONK787839.405415.18919asparagus_officinalisONK7903134.661419.1235
A4U43_C01F2160asparagus_officinalisONK7501017.92218.83117asparagus_officinalisONK7903127.4913.5458
A4U43_C01F2160asparagus_officinalisONK6550220.159211.4058asparagus_officinalisONK7903130.278917.1315
A4U43_C01F2160asparagus_officinalisONK5604139.426524.0143asparagus_officinalisONK7903143.824726.6932
A4U43_C01F2160asparagus_officinalisONK6388652.049233.1967asparagus_officinalisONK7903150.597632.2709
A4U43_C01F2160asparagus_officinalisONK6484519.473711.0526asparagus_officinalisONK7903129.482116.7331
A4U43_C01F2160asparagus_officinalisONK7955923.333313.6364asparagus_officinalisONK7903130.677317.9283
A4U43_C01F2160asparagus_officinalisONK6484320.161310.7527asparagus_officinalisONK7903129.880515.9363
A4U43_C01F2160asparagus_officinalisONK583592510.7143asparagus_officinalisONK7903113.94425.9761
A4U43_C01F2160asparagus_officinalisONK7766623.809511.5646asparagus_officinalisONK7903113.94426.77291
A4U43_C01F2160asparagus_officinalisONK6432817.69049.33661asparagus_officinalisONK7903128.685315.1394
A4U43_C01F2160asparagus_officinalisONK7749915.26037.18133asparagus_officinalisONK7903133.864515.9363
A4U43_C01F2160asparagus_officinalisONK5757514.10266.57051asparagus_officinalisONK7903135.059816.3347
A4U43_C01F2160asparagus_officinalisONK649889.090914.82375asparagus_officinalisONK7903119.521910.3586
A4U43_C01F2160asparagus_officinalisONK5677432.817.6asparagus_officinalisONK7903116.33478.76494
A4U43_C01F2160asparagus_officinalisONK6804120.518912.5asparagus_officinalisONK7903134.661421.1155
A4U43_C01F2160asparagus_officinalisONK6606720.286413.1265asparagus_officinalisONK7903133.864521.9123
A4U43_C01F2160asparagus_officinalisONK6593932.608717.3913asparagus_officinalisONK7903117.92839.56175
A4U43_C01F2160asparagus_officinalisONK7572826.209715.3226asparagus_officinalisONK7903125.896415.1394
A4U43_C01F2160asparagus_officinalisONK8102022.689112.3249asparagus_officinalisONK7903132.270917.5299
A4U43_C01F2160asparagus_officinalisONK6934823.489913.0872asparagus_officinalisONK7903127.888415.5378
A4U43_C01F2160asparagus_officinalisONK7248318.58828.70588asparagus_officinalisONK7903131.474114.741
A4U43_C01F2160asparagus_officinalisONK8206823.582111.9403asparagus_officinalisONK7903131.474115.9363
A4U43_C01F2160asparagus_officinalisONK7635116.83999.97921asparagus_officinalisONK7903132.270919.1235
A4U43_C01F2160asparagus_officinalisONK7565221.333311.2asparagus_officinalisONK7903131.872516.7331
A4U43_C01F2160asparagus_officinalisONK6516716.73397.8629asparagus_officinalisONK7903133.067715.5378
A4U43_C01F2160asparagus_officinalisONK6732410.25935.74972asparagus_officinalisONK7903136.25520.3187

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
A4U43_C01F2160asparagus_officinalisONK7903168.127556.1753papaver_somniferumRZC7743070.661258.2645
A4U43_C01F2160asparagus_officinalisONK7903170.916359.761papaver_somniferumRZC8313670.916359.761
A4U43_C01F2160asparagus_officinalisONK7903171.713260.5578theobroma_cacaoEOX9675071.146260.0791
A4U43_C01F2160asparagus_officinalisONK7903175.298862.5498cucumis_meloMELO3C023523.2.175.298862.5498
A4U43_C01F2160asparagus_officinalisONK7903172.5158.5657cucumis_sativusKGN4515968.679255.4717
A4U43_C01F2160asparagus_officinalisONK7903169.721160.1594populus_trichocarpaPotri.009G065900.1.v4.168.627459.2157
A4U43_C01F2160asparagus_officinalisONK7903165.338653.3865arabidopsis_thalianaAT3G52150.164.822152.9644
A4U43_C01F2160asparagus_officinalisONK7903137.051831.4741brassica_napusCDX7806778.813666.9492
A4U43_C01F2160asparagus_officinalisONK7903164.940253.3865brassica_napusCDX7806664.940253.3865
A4U43_C01F2160asparagus_officinalisONK7903160.159450.1992brassica_napusCDX7365563.179952.7197
A4U43_C01F2160asparagus_officinalisONK7903165.338653.7849brassica_napusCDX7806963.813252.5292
A4U43_C01F2160asparagus_officinalisONK7903156.175344.6215brassica_napusCDY2319261.03948.4848
A4U43_C01F2160asparagus_officinalisONK7903165.737154.9801brassica_napusCDX9531962.977152.6718
A4U43_C01F2160asparagus_officinalisONK7903163.74550.5976brassica_junceacds.BjuA09g20820S49.230839.0769
A4U43_C01F2160asparagus_officinalisONK7903166.932354.5817brassica_junceacds.BjuB06g02400S63.878352.0913
A4U43_C01F2160asparagus_officinalisONK7903162.948250.996brassica_junceacds.BjuA04g06160S59.622648.3019
A4U43_C01F2160asparagus_officinalisONK7903142.629533.4661brassica_junceacds.BjuA09g20850S51.690840.5797
A4U43_C01F2160asparagus_officinalisONK7903158.565747.012brassica_junceacds.BjuA09g20840S44.954136.0856
A4U43_C01F2160asparagus_officinalisONK7903142.629533.4661brassica_junceacds.BjuA09g20810S51.690840.5797
A4U43_C01F2160asparagus_officinalisONK7903169.322759.761prunus_persicaONI2029469.322759.761
A4U43_C01F2160asparagus_officinalisONK7903164.143456.1753cajanus_cajanC.cajan_42100.t78.921669.1176
A4U43_C01F2160asparagus_officinalisONK7903170.916359.3625malus_domestica_goldenmRNA:MD07G000360070.916359.3625
A4U43_C01F2160asparagus_officinalisONK7903170.119559.3625malus_domestica_goldenmRNA:MD02G026430070.119559.3625
A4U43_C01F2160asparagus_officinalisONK7903165.338655.7769medicago_truncatulaAES6930369.787259.5745
A4U43_C01F2160asparagus_officinalisONK7903163.346653.3865lupinus_angustifoliusOIW1174359.328450
A4U43_C01F2160asparagus_officinalisONK7903170.119558.5657phaseolus_vulgarisESW2106973.02960.9958
A4U43_C01F2160asparagus_officinalisONK7903168.127558.1673glycine_maxKRH1390069.512259.3496
A4U43_C01F2160asparagus_officinalisONK7903166.533956.5737glycine_maxKRH4346561.851952.5926
A4U43_C01F2160asparagus_officinalisONK7903167.729156.9721pisum_sativumPsat0s2674g0040.1.cds71.428660.084
A4U43_C01F2160asparagus_officinalisONK7903164.541855.7769sesamum_indicumSIN_1008220.t62.307753.8462
A4U43_C01F2160asparagus_officinalisONK7903165.737157.7689helianthus_annuusmRNA:HanXRQr2_Chr17g081793169.915361.4407
A4U43_C01F2160asparagus_officinalisONK7903168.127559.3625helianthus_annuusmRNA:HanXRQr2_Chr16g075956166.53757.9767
A4U43_C01F2160asparagus_officinalisONK7903170.916361.753manihot_esculentaOAY4008369.260760.3113
A4U43_C01F2160asparagus_officinalisONK7903167.330755.3785avena_sativa_sangAVESA.00010b.r2.5DG0971210.1.CDS68.979656.7347
A4U43_C01F2160asparagus_officinalisONK7903167.330754.9801avena_sativa_sangAVESA.00010b.r2.5AG0838640.1.CDS68.979656.3265
A4U43_C01F2160asparagus_officinalisONK7903168.127554.9801avena_sativa_sangAVESA.00010b.r2.5CG0896160.1.CDS69.795956.3265
A4U43_C01F2160asparagus_officinalisONK7903165.737152.988oryza_brachyanthaOB09G12240.167.901254.7325
A4U43_C01F2160asparagus_officinalisONK7903166.533952.5896oryza_rufipogonORUFI09G03880.168.163353.8776
A4U43_C01F2160asparagus_officinalisONK7903163.74550.1992oryza_punctataOPUNC09G03070.167.796653.3898
A4U43_C01F2160asparagus_officinalisONK7903166.932354.1833avena_sativa_ot3098cds.AVESA.00001b.r3.5Dg0001702.162.453550.5576
A4U43_C01F2160asparagus_officinalisONK7903168.127554.9801avena_sativa_ot3098cds.AVESA.00001b.r3.5Cg0001731.169.795956.3265
A4U43_C01F2160asparagus_officinalisONK7903166.135552.988avena_sativa_ot3098cds.AVESA.00001b.r3.5Ag0002145.159.498247.6702
A4U43_C01F2160asparagus_officinalisONK7903166.135552.988secale_cerealeSECCE5Rv1G0322620.168.032854.5082
A4U43_C01F2160asparagus_officinalisONK7903159.76148.2072oryza_longistaminataKN539565.1_FGP01073.170759.0244
A4U43_C01F2160asparagus_officinalisONK7903166.533951.3944setaria_italicaKQL2398768.442652.8689
A4U43_C01F2160asparagus_officinalisONK7903166.533951.3944setaria_viridisTKW3242968.442652.8689
A4U43_C01F2160asparagus_officinalisONK7903164.940252.5896triticum_aestivumTraesCS5D02G178300.166.803354.0984
A4U43_C01F2160asparagus_officinalisONK7903165.338652.5896triticum_aestivumTraesCS5A02G173800.167.213154.0984
A4U43_C01F2160asparagus_officinalisONK7903165.338652.5896triticum_aestivumTraesCS5B02G171200.167.213154.0984
A4U43_C01F2160asparagus_officinalisONK7903175.298866.5339ananas_comosusAco015665.1.mrna174.409465.748
A4U43_C01F2160asparagus_officinalisONK7903164.541850.1992triticum_urartuTuG1812G0500002044.01.T0259.340746.1538
A4U43_C01F2160asparagus_officinalisONK7903166.135552.1912oryza_glumipatulaOGLUM09G04210.165.354351.5748
A4U43_C01F2160asparagus_officinalisONK7903166.533952.5896oryza_sativaOs09t0279500-0168.163353.8776
A4U43_C01F2160asparagus_officinalisONK7903166.135552.988brachypodium_distachyonKQJ8965968.032854.5082
A4U43_C01F2160asparagus_officinalisONK7903162.549849.8008aegilops_tauschiiAET5Gv20435200.463.052250.2008
A4U43_C01F2160asparagus_officinalisONK7903152.191245.8167chenopodium_quinoaAUR62018563-RA:cds69.312260.8466
A4U43_C01F2160asparagus_officinalisONK7903151.394447.4104chenopodium_quinoaAUR62020856-RA:cds82.165675.7962
A4U43_C01F2160asparagus_officinalisONK7903166.135553.7849arabis_alpinaKFK3446866.935554.4355
A4U43_C01F2160asparagus_officinalisONK7903176.095664.5418musa_acuminataMa04_p25980.175.494164.0316
A4U43_C01F2160asparagus_officinalisONK7903168.924358.1673olea_europaeaOE9A039957C168.379457.7075
A4U43_C01F2160asparagus_officinalisONK7903169.322758.9641cynara_cardunculusKVH9707269.322758.9641
A4U43_C01F2160asparagus_officinalisONK7903170.517956.1753nymphaea_colorataNC6G0268870.1:cds71.659957.085
A4U43_C01F2160asparagus_officinalisONK7903176.095665.7371dioscorea_rotundataDRNTG_09729.177.959267.3469
A4U43_C01F2160asparagus_officinalisONK7903164.143450.1992triticum_turgidumTRITD5Av1G127570.458.974446.1538
A4U43_C01F2160asparagus_officinalisONK7903164.541850.1992triticum_turgidumTRITD5Bv1G107040.559.340746.1538
A4U43_C01F2160asparagus_officinalisONK7903164.541853.3865arabidopsis_hallerig28341.t163.779552.7559
A4U43_C01F2160asparagus_officinalisONK7903167.330755.7769eutrema_salsugineumESQ4529065.503954.2636
A4U43_C01F2160asparagus_officinalisONK7903159.362546.2151oryza_indicaBGIOSGA030088-PA65.929251.3274
A4U43_C01F2160asparagus_officinalisONK7903164.940253.7849kalanchoe_fedtschenkoiKaladp0060s0283.1.v1.164.426953.3597
A4U43_C01F2160asparagus_officinalisONK7903164.541850.996saccharum_spontaneumSspon.02G0017580-3D-mRNA-1:cds66.393452.459
A4U43_C01F2160asparagus_officinalisONK7903162.948248.6056saccharum_spontaneumSspon.02G0017580-2C-mRNA-1:cds64.754150
A4U43_C01F2160asparagus_officinalisONK7903163.346654.5817corymbia_citriodoracds-KAF8009779.161.3952.8958
A4U43_C01F2160asparagus_officinalisONK7903168.127558.1673citrus_clementinaESR5230566.279156.5891
A4U43_C01F2160asparagus_officinalisONK7903140.637521.1155caenorhabditis_elegansR05H10.2.116.77638.7171
A4U43_C01F2160asparagus_officinalisONK7903167.729157.3705fraxinus_excelsiorFRAEX38873_v2_000068350.1.cds67.193756.917
A4U43_C01F2160asparagus_officinalisONK7903168.924358.9641fraxinus_excelsiorFRAEX38873_v2_000200330.1.cds68.379458.498
A4U43_C01F2160asparagus_officinalisONK7903165.338652.1912echinochloa_crusgalliscaffold189.20.cds67.213153.6885
A4U43_C01F2160asparagus_officinalisONK7903165.338652.1912echinochloa_crusgalliscaffold24.64.cds67.489753.9095
A4U43_C01F2160asparagus_officinalisONK7903165.338651.7928echinochloa_crusgalliscaffold79.98.cds67.213153.2787
A4U43_C01F2160asparagus_officinalisONK7903163.346650.5976triticum_dicoccoidesTRIDC5AG028490.464.112951.2097
A4U43_C01F2160asparagus_officinalisONK7903165.338652.5896triticum_dicoccoidesTRIDC5BG029910.156.357445.3608
A4U43_C01F2160asparagus_officinalisONK7903166.135553.3865brassica_rapa_ro18A04p009000.1_BraROA.165.09852.549
A4U43_C01F2160asparagus_officinalisONK7903164.940253.3865brassica_rapa_ro18A09p057630.1_BraROA.164.940253.3865
A4U43_C01F2160asparagus_officinalisONK7903165.737154.1833leersia_perrieriLPERR09G02520.168.464756.4315
A4U43_C01F2160asparagus_officinalisONK7903169.322759.761eucalyptus_grandisKCW5179837.58132.3974
A4U43_C01F2160asparagus_officinalisONK7903172.111660.9562actinidia_chinensisPSS2448371.541560.4743
A4U43_C01F2160asparagus_officinalisONK7903166.135555.3785brassica_oleraceaBo4g125600.163.117952.8517
A4U43_C01F2160asparagus_officinalisONK7903171.713260.5578vitis_viniferaVitvi13g01777_P00172.874561.5385
A4U43_C01F2160asparagus_officinalisONK7903161.354650.1992oryza_barthiiOBART09G03440.170.642257.7982
A4U43_C01F2160asparagus_officinalisONK7903165.338653.3865camelina_sativaCsa06g026380.164.822152.9644
A4U43_C01F2160asparagus_officinalisONK7903166.135555.7769camelina_sativaCsa04g037960.160.583951.0949
A4U43_C01F2160asparagus_officinalisONK7903165.338653.7849camelina_sativaCsa09g059180.164.822153.3597
A4U43_C01F2160asparagus_officinalisONK7903164.541852.5896eragrostis_curvulaTVU1113466.393454.0984
A4U43_C01F2160asparagus_officinalisONK7903170.119558.9641coffea_canephoraCDP0771967.692356.9231
A4U43_C01F2160asparagus_officinalisONK7903145.816738.6454coffea_canephoraCDP0771667.647157.0588
A4U43_C01F2160asparagus_officinalisONK7903162.549849.004zea_maysZm00001eb308420_P00457.090944.7273
A4U43_C01F2160asparagus_officinalisONK7903136.25532.2709amborella_trichopodaERN1640879.130470.4348
A4U43_C01F2160asparagus_officinalisONK7903168.127558.1673quercus_subercds-POE83849.163.568854.2751
A4U43_C01F2160asparagus_officinalisONK7903166.533952.5896eragrostis_tefEt_2A_015379.CDS52.848141.7722
A4U43_C01F2160asparagus_officinalisONK7903165.737152.988eragrostis_tefEt_2B_019575.CDS68.7555.4167
A4U43_C01F2160asparagus_officinalisONK7903166.533952.988oryza_meridionalisOMERI09G02690.168.163354.2857
A4U43_C01F2160asparagus_officinalisONK7903170.517958.5657corchorus_capsularisOMO6979669.68557.874
A4U43_C01F2160asparagus_officinalisONK7903170.119559.761gossypium_raimondiiKJB5961569.841359.5238
A4U43_C01F2160asparagus_officinalisONK7903164.940252.988hordeum_vulgareHORVU.MOREX.r3.5HG0471050.166.803354.5082
A4U43_C01F2160asparagus_officinalisONK7903165.338651.7928digitaria_exilisDexi2A01G0013760.1:cds67.768653.719
A4U43_C01F2160asparagus_officinalisONK7903167.330752.5896digitaria_exilisDexi2B01G0012840.1:cds69.834754.5455
A4U43_C01F2160asparagus_officinalisONK7903149.402444.6215vigna_radiataVradi05g17990.185.517277.2414
A4U43_C01F2160asparagus_officinalisONK7903165.737151.7928oryza_nivaraONIVA09G03800.165.476251.5873

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression