Description

Ensembl ID A4U43_C01F20780 Gene ID Accession -
Symbol Alias - Full Name uncharacterized protein
Status Confidence Length 9242 bases Strand Plus strand
Position 1 : 80256270 - 80265511 RNA binding domain RRM_1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ONK80699 RRM_1 PF00076 8.2e-08 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
A4U43_C01F20780asparagus_officinalisONK6964912.08415.42907asparagus_officinalisONK8069938.121517.1271

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
A4U43_C01F20780asparagus_officinalisONK8069952.486237.5691papaver_somniferumRZC5003826.536318.9944
A4U43_C01F20780asparagus_officinalisONK8069965.193441.9889cannabis_sativa_femalecds.evm.model.02.258444.029928.3582
A4U43_C01F20780asparagus_officinalisONK8069965.745940.884ficus_caricaFCD_00005538-RA:cds42.652326.5233
A4U43_C01F20780asparagus_officinalisONK8069961.878539.779beta_vulgarisKMT0553935.331222.7129
A4U43_C01F20780asparagus_officinalisONK8069960.773542.5414citrullus_lanatusCla97C09G162550.141.984729.3893
A4U43_C01F20780asparagus_officinalisONK8069963.535943.6464theobroma_cacaoEOY2708342.124528.9377
A4U43_C01F20780asparagus_officinalisONK8069953.591236.4641cucumis_meloMELO3C024397.2.140.928327.8481
A4U43_C01F20780asparagus_officinalisONK8069961.32643.0939cucumis_sativusKGN4553542.366429.771
A4U43_C01F20780asparagus_officinalisONK8069962.983441.4365populus_trichocarpaPotri.003G035000.2.v4.140.569426.6904
A4U43_C01F20780asparagus_officinalisONK8069961.878543.0939arabidopsis_thalianaAT3G13700.137.837826.3514
A4U43_C01F20780asparagus_officinalisONK8069958.011140.3315brassica_napusCDY2363138.888927.037
A4U43_C01F20780asparagus_officinalisONK8069959.668542.5414brassica_napusCDX9750840.298528.7313
A4U43_C01F20780asparagus_officinalisONK8069960.22140.884brassica_junceacds.BjuB01g08070S36.092724.5033
A4U43_C01F20780asparagus_officinalisONK8069959.668542.5414brassica_junceacds.BjuA05g30860S38.989227.7978
A4U43_C01F20780asparagus_officinalisONK8069966.850844.1989prunus_persicaONI1559843.214328.5714
A4U43_C01F20780asparagus_officinalisONK8069966.850844.1989prunus_dulcisVVA2424835.588223.5294
A4U43_C01F20780asparagus_officinalisONK8069959.668539.779cajanus_cajanC.cajan_00518.t36.610224.4068
A4U43_C01F20780asparagus_officinalisONK8069961.32640.884malus_domestica_goldenmRNA:MD09G016970040.659327.1062
A4U43_C01F20780asparagus_officinalisONK8069960.773541.4365medicago_truncatulaKEH1833341.044827.9851
A4U43_C01F20780asparagus_officinalisONK8069952.486234.2541lupinus_angustifoliusOIW1717934.545522.5455
A4U43_C01F20780asparagus_officinalisONK8069952.486235.9116lupinus_angustifoliusOIW0493439.094726.749
A4U43_C01F20780asparagus_officinalisONK8069959.11639.2265phaseolus_vulgarisESW0755740.530326.8939
A4U43_C01F20780asparagus_officinalisONK8069959.668540.3315glycine_maxKRH4416838.989226.3538
A4U43_C01F20780asparagus_officinalisONK8069958.563539.2265glycine_maxKRH471434026.7925
A4U43_C01F20780asparagus_officinalisONK8069961.878539.779pisum_sativumPsat4g190320.1.cds41.79126.8657
A4U43_C01F20780asparagus_officinalisONK8069960.22140.884vigna_unguiculataVigun10g174400.1.v1.241.287928.0303
A4U43_C01F20780asparagus_officinalisONK8069959.668540.884vigna_angularisKOM3023139.560427.1062
A4U43_C01F20780asparagus_officinalisONK8069960.22140.884sesamum_indicumSIN_1010384.t35.504924.1042
A4U43_C01F20780asparagus_officinalisONK8069961.878540.3315helianthus_annuusmRNA:HanXRQr2_Chr02g004636141.025626.7399
A4U43_C01F20780asparagus_officinalisONK8069962.430937.5691lactuca_sativacds-PLY94652.141.544125
A4U43_C01F20780asparagus_officinalisONK8069961.878541.4365solanum_tuberosumPGSC0003DMT40000641040.287826.9784
A4U43_C01F20780asparagus_officinalisONK8069962.983440.884solanum_lycopersicumSolyc03g121450.3.122.529614.6245
A4U43_C01F20780asparagus_officinalisONK8069964.640945.3039manihot_esculentaOAY5314141.63729.1815
A4U43_C01F20780asparagus_officinalisONK8069956.353639.779avena_sativa_sangAVESA.00010b.r2.5CG0862690.1.CDS34.812324.5734
A4U43_C01F20780asparagus_officinalisONK8069958.563541.4365avena_sativa_sangAVESA.00010b.r2.7DG1339650.1.CDS37.455826.5018
A4U43_C01F20780asparagus_officinalisONK8069928.176821.547avena_sativa_sangAVESA.00010b.r2.7AG1203980.1.CDS25.628119.598
A4U43_C01F20780asparagus_officinalisONK8069925.41447.18232lolium_perennecds.KYUSt_chr7.3789715.13164.27632
A4U43_C01F20780asparagus_officinalisONK8069954.696139.779lolium_perennecds.KYUSt_chr7.3789429.729721.6216
A4U43_C01F20780asparagus_officinalisONK8069956.353640.884lolium_perennecds.KYUSt_chr7.3789628.099220.3857
A4U43_C01F20780asparagus_officinalisONK8069958.563540.3315oryza_brachyanthaOB06G13110.135.690224.5791
A4U43_C01F20780asparagus_officinalisONK8069958.563539.779oryza_rufipogonORUFI06G03400.136.551724.8276
A4U43_C01F20780asparagus_officinalisONK8069953.038735.9116oryza_punctataOPUNC06G03210.124.181416.3728
A4U43_C01F20780asparagus_officinalisONK8069956.353639.779avena_sativa_ot3098cds.AVESA.00001b.r3.5Cg0003121.231.578922.291
A4U43_C01F20780asparagus_officinalisONK8069959.11641.4365avena_sativa_ot3098cds.AVESA.00001b.r3.7Dg0003322.136.026925.2525
A4U43_C01F20780asparagus_officinalisONK8069956.906140.3315avena_sativa_ot3098cds.AVESA.00001b.r3.7Ag0000817.134.10624.1722
A4U43_C01F20780asparagus_officinalisONK8069958.563540.884secale_cerealeSECCE4Rv1G0264680.135.690224.9158
A4U43_C01F20780asparagus_officinalisONK8069960.22141.4365oryza_glaberrimaORGLA06G0033900.136.333325
A4U43_C01F20780asparagus_officinalisONK8069948.066331.4917oryza_longistaminataKN540365.1_FGP00818.954212.4183
A4U43_C01F20780asparagus_officinalisONK8069922.099418.232setaria_italicaKQL0973924.691420.3704
A4U43_C01F20780asparagus_officinalisONK8069957.458644.1989sorghum_bicolorKXG1932034.666726.6667
A4U43_C01F20780asparagus_officinalisONK8069960.22146.9613setaria_viridisTKW2020936.333328.3333
A4U43_C01F20780asparagus_officinalisONK8069958.563540.3315triticum_aestivumTraesCS7A02G106400.135.690224.5791
A4U43_C01F20780asparagus_officinalisONK8069958.563540.3315triticum_aestivumTraesCS7D02G100500.135.690224.5791
A4U43_C01F20780asparagus_officinalisONK8069957.458639.2265triticum_aestivumTraesCS7B02G005000.135.016823.9057
A4U43_C01F20780asparagus_officinalisONK8069958.563540.3315triticum_urartuTuG1812G0700001102.01.T0135.690224.5791
A4U43_C01F20780asparagus_officinalisONK8069958.011139.2265oryza_glumipatulaOGLUM06G03460.136.206924.4828
A4U43_C01F20780asparagus_officinalisONK8069927.624316.5746ipomoea_trilobaitb11g09570.t144.247826.5487
A4U43_C01F20780asparagus_officinalisONK8069960.773540.3315ipomoea_trilobaitb11g09360.t538.461525.5245
A4U43_C01F20780asparagus_officinalisONK8069960.22141.4365oryza_sativaOs06t0151200-0136.333325
A4U43_C01F20780asparagus_officinalisONK8069965.193443.6464prunus_aviumPav_sc0001797.1_g660.1.mk:mrna34.604123.1672
A4U43_C01F20780asparagus_officinalisONK8069955.801140.884brachypodium_distachyonKQK1961833.223724.3421
A4U43_C01F20780asparagus_officinalisONK8069961.32637.0166chenopodium_quinoaAUR62009809-RA:cds35.015821.1356
A4U43_C01F20780asparagus_officinalisONK8069961.32636.4641chenopodium_quinoaAUR62043081-RA:cds46.2527.5
A4U43_C01F20780asparagus_officinalisONK8069959.668541.4365arabis_alpinaKFK3871938.571426.7857
A4U43_C01F20780asparagus_officinalisONK8069965.193440.3315rosa_chinensisPRQ5129442.293926.1649
A4U43_C01F20780asparagus_officinalisONK8069960.22139.779nicotiana_attenuataOIT0524639.492826.087
A4U43_C01F20780asparagus_officinalisONK8069961.878543.0939quercus_lobataQL05p014819:mrna39.160827.2727
A4U43_C01F20780asparagus_officinalisONK8069965.745948.0663musa_acuminataMa02_p18380.237.187527.1875
A4U43_C01F20780asparagus_officinalisONK8069960.22140.3315olea_europaeaOE9A053548C139.636426.5455
A4U43_C01F20780asparagus_officinalisONK8069961.32648.0663panicum_halliiPUZ6218630.833324.1667
A4U43_C01F20780asparagus_officinalisONK8069955.248636.4641cynara_cardunculusKVH9795937.878825
A4U43_C01F20780asparagus_officinalisONK8069960.773543.6464nymphaea_colorataNC1G0132040.1:cds30.30321.7631
A4U43_C01F20780asparagus_officinalisONK8069963.535948.6188dioscorea_rotundataDRNTG_14791.135.714327.3292
A4U43_C01F20780asparagus_officinalisONK8069958.563540.3315triticum_turgidumTRITD7Av1G030930.135.690224.5791
A4U43_C01F20780asparagus_officinalisONK8069958.011138.674triticum_turgidumTRITD7Bv1G001550.333.227822.1519
A4U43_C01F20780asparagus_officinalisONK8069962.430943.6464arabidopsis_hallerig06899.t139.372827.5261
A4U43_C01F20780asparagus_officinalisONK8069960.773541.9889eutrema_salsugineumESQ4863238.327526.4808
A4U43_C01F20780asparagus_officinalisONK8069960.773540.884pistacia_veracds-EVM0014935.139.855126.8116
A4U43_C01F20780asparagus_officinalisONK8069961.32640.884pistacia_veracds-EVM0022599.140.217426.8116
A4U43_C01F20780asparagus_officinalisONK8069960.773541.9889oryza_indicaBGIOSGA021897-PA34.920624.127
A4U43_C01F20780asparagus_officinalisONK8069956.906144.7514saccharum_spontaneumSspon.08G0014870-3D-mRNA-1:cds34.448227.0903
A4U43_C01F20780asparagus_officinalisONK8069953.591240.884saccharum_spontaneumSspon.08G0014870-1A-mRNA-1:cds27.635321.0826
A4U43_C01F20780asparagus_officinalisONK8069940.88433.1492saccharum_spontaneumSspon.08G0014870-2B-mRNA-1:cds25.517220.6897
A4U43_C01F20780asparagus_officinalisONK8069964.088439.779corymbia_citriodoracds-KAF8025692.140.989425.4417
A4U43_C01F20780asparagus_officinalisONK8069964.088441.9889citrus_clementinaESR3974840.559426.5734
A4U43_C01F20780asparagus_officinalisONK8069959.668539.779fraxinus_excelsiorFRAEX38873_v2_000151210.2.cds39.130426.087
A4U43_C01F20780asparagus_officinalisONK8069938.121529.8343echinochloa_crusgalliscaffold10.261.cds31.363624.5455
A4U43_C01F20780asparagus_officinalisONK8069928.729319.337echinochloa_crusgalliscaffold3.117.cds37.956225.5474
A4U43_C01F20780asparagus_officinalisONK8069960.773548.0663echinochloa_crusgalliscaffold10.254.cds37.03729.2929
A4U43_C01F20780asparagus_officinalisONK8069948.066333.7017triticum_dicoccoidesTRIDC7BG000600.232.830223.0189
A4U43_C01F20780asparagus_officinalisONK8069957.458640.3315triticum_dicoccoidesTRIDC7AG012370.433.333323.3974
A4U43_C01F20780asparagus_officinalisONK8069923.756916.0221trifolium_pratenseTp57577_TGAC_v2_mRNA4202759.722240.2778
A4U43_C01F20780asparagus_officinalisONK8069931.491720.9945trifolium_pratenseTp57577_TGAC_v2_mRNA818032.758621.8391
A4U43_C01F20780asparagus_officinalisONK8069959.668542.5414brassica_rapa_ro18A05p045650.1_BraROA.140.298528.7313
A4U43_C01F20780asparagus_officinalisONK8069959.11639.2265leersia_perrieriLPERR06G03200.132.923121.8462
A4U43_C01F20780asparagus_officinalisONK8069964.088438.1215eucalyptus_grandisKCW6974140.559424.1259
A4U43_C01F20780asparagus_officinalisONK8069962.430940.884actinidia_chinensisPSS1805340.94226.8116
A4U43_C01F20780asparagus_officinalisONK8069963.535942.5414actinidia_chinensisPSS0735941.516227.7978
A4U43_C01F20780asparagus_officinalisONK8069958.563540.3315brassica_oleraceaBo5g132230.139.259327.037
A4U43_C01F20780asparagus_officinalisONK8069963.535944.7514vitis_viniferaVitvi09g00202_P00142.279429.7794
A4U43_C01F20780asparagus_officinalisONK8069961.878542.5414arabidopsis_lyratafgenesh2_kg.3__1470__AT3G13710.139.024426.8293
A4U43_C01F20780asparagus_officinalisONK8069961.32641.9889camelina_sativaCsa19g019160.123.076915.8004
A4U43_C01F20780asparagus_officinalisONK8069961.32641.4365camelina_sativaCsa01g016070.114.39699.72763
A4U43_C01F20780asparagus_officinalisONK8069961.878541.9889camelina_sativaCsa15g017880.112.85888.7256
A4U43_C01F20780asparagus_officinalisONK8069958.011139.2265daucus_carotaKZN0677836.332224.5675
A4U43_C01F20780asparagus_officinalisONK8069957.458645.3039eragrostis_curvulaTVU1257629.213523.0337
A4U43_C01F20780asparagus_officinalisONK8069965.745942.5414coffea_canephoraCDO9792740.614326.2799
A4U43_C01F20780asparagus_officinalisONK8069959.668544.1989zea_maysZm00001eb270800_P0013626.6667
A4U43_C01F20780asparagus_officinalisONK8069961.32646.4088amborella_trichopodaERN1525232.267424.4186
A4U43_C01F20780asparagus_officinalisONK8069961.878543.6464quercus_subercds-POE91723.139.436627.8169
A4U43_C01F20780asparagus_officinalisONK8069948.066335.9116eragrostis_tefEt_2A_016204.CDS31.071423.2143
A4U43_C01F20780asparagus_officinalisONK8069956.353641.4365eragrostis_tefEt_2B_020323.CDS27.868920.4918
A4U43_C01F20780asparagus_officinalisONK8069962.430944.1989juglans_regiacds.Jr07_28440_p140.647528.777
A4U43_C01F20780asparagus_officinalisONK8069933.701722.6519juglans_regiacds.Jr07_28450_p156.481537.963
A4U43_C01F20780asparagus_officinalisONK8069958.011139.779oryza_meridionalisOMERI06G03970.135.593224.4068
A4U43_C01F20780asparagus_officinalisONK8069963.535944.1989corylus_avellanaCav07g10190.t140.780128.3688
A4U43_C01F20780asparagus_officinalisONK8069960.22140.3315corchorus_capsularisOMO7081738.380325.7042
A4U43_C01F20780asparagus_officinalisONK8069962.430940.884gossypium_raimondiiKJB7026041.391927.1062
A4U43_C01F20780asparagus_officinalisONK8069958.011139.779hordeum_vulgareHORVU.MOREX.r3.7HG0651460.235.47324.3243
A4U43_C01F20780asparagus_officinalisONK8069944.751434.8066digitaria_exilisDexi4B01G0003780.1:cds33.061225.7143
A4U43_C01F20780asparagus_officinalisONK8069960.22145.8564digitaria_exilisDexi4A01G0003670.1:cds36.333327.6667
A4U43_C01F20780asparagus_officinalisONK8069959.668540.884vigna_radiataVradi09g01880.131.952721.8935

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression