Description

Ensembl ID A4U43_C01F16970 Gene ID Accession -
Symbol Alias - Full Name uncharacterized protein
Status Confidence Length 4476 bases Strand Minus strand
Position 1 : 56081204 - 56085679 RNA binding domain RRM_1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ONK80373 RRM_1 PF00076 1.9e-06 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
A4U43_C01F16970asparagus_officinalisONK5656257.638956.5972asparagus_officinalisONK8037382.587181.0945
A4U43_C01F16970asparagus_officinalisONK6333434.123228.436asparagus_officinalisONK8037335.820929.8507
A4U43_C01F16970asparagus_officinalisONK7648235.507228.6232asparagus_officinalisONK8037348.756239.3035
A4U43_C01F16970asparagus_officinalisONK6560040.243932.9268asparagus_officinalisONK8037349.253740.2985
A4U43_C01F16970asparagus_officinalisONK7553824.819.6asparagus_officinalisONK8037330.845824.3781
A4U43_C01F16970asparagus_officinalisONK6531015.724812.285asparagus_officinalisONK8037331.840824.8756

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
A4U43_C01F16970asparagus_officinalisONK8037338.80632.8358chlamydomonas_reinhardtiiPNW7414027.272723.0769
A4U43_C01F16970asparagus_officinalisONK8037345.273635.8209physcomitrium_patensPp3c5_15610V3.135.271327.907
A4U43_C01F16970asparagus_officinalisONK8037361.691552.2388ficus_caricaFCD_00027299-RA:cds38.7532.8125
A4U43_C01F16970asparagus_officinalisONK8037350.746337.3134cucumis_sativusKGN6657425.310218.6104
A4U43_C01F16970asparagus_officinalisONK8037359.701548.7562populus_trichocarpaPotri.008G056600.1.v4.143.795635.7664
A4U43_C01F16970asparagus_officinalisONK8037366.169254.2289populus_trichocarpaPotri.010G203200.4.v4.148.717939.9267
A4U43_C01F16970asparagus_officinalisONK8037362.686656.2189arabidopsis_thalianaAT3G55460.148.091643.1298
A4U43_C01F16970asparagus_officinalisONK8037345.273637.8109brassica_napusCDY3306031.707326.4808
A4U43_C01F16970asparagus_officinalisONK8037363.681652.7363prunus_persicaONI2436547.583639.4052
A4U43_C01F16970asparagus_officinalisONK8037364.179153.2338prunus_dulcisVVA1248342.295135.082
A4U43_C01F16970asparagus_officinalisONK8037362.686651.2438malus_domestica_goldenmRNA:MD07G016440035.49329.0141
A4U43_C01F16970asparagus_officinalisONK8037363.184152.2388malus_domestica_goldenmRNA:MD01G010670037.134530.7018
A4U43_C01F16970asparagus_officinalisONK8037363.681654.2289helianthus_annuusmRNA:HanXRQr2_Chr07g031056149.420842.0849
A4U43_C01F16970asparagus_officinalisONK8037365.174155.2239manihot_esculentaOAY3862348.339540.9594
A4U43_C01F16970asparagus_officinalisONK8037332.835825.8706lolium_perennecds.KYUSt_chr4.1492849.624139.0977
A4U43_C01F16970asparagus_officinalisONK8037350.746339.3035oryza_brachyanthaOB11G28070.124.637719.0821
A4U43_C01F16970asparagus_officinalisONK8037341.293529.3532oryza_rufipogonORUFI11G25510.216.403211.6601
A4U43_C01F16970asparagus_officinalisONK8037351.741343.2836secale_cerealeSECCE4Rv1G0232240.111.1239.30481
A4U43_C01F16970asparagus_officinalisONK8037347.761235.3234oryza_glaberrimaORGLA11G0189900.119.123514.1434
A4U43_C01F16970asparagus_officinalisONK8037352.736342.7861triticum_aestivumTraesCS4D02G136700.411.68699.48181
A4U43_C01F16970asparagus_officinalisONK8037353.233843.2836triticum_aestivumTraesCS4A02G176000.1311.75829.56044
A4U43_C01F16970asparagus_officinalisONK8037335.323425.8706homo_sapiensENSP0000041430227.203119.9234
A4U43_C01F16970asparagus_officinalisONK8037353.731343.7811triticum_urartuTuG1812S0002072700.01.T0120.111716.3873
A4U43_C01F16970asparagus_officinalisONK8037337.810927.8607oryza_glumipatulaOGLUM11G22800.117.272712.7273
A4U43_C01F16970asparagus_officinalisONK8037348.756235.8209oryza_sativaOs11t0704700-0119.178114.09
A4U43_C01F16970asparagus_officinalisONK8037354.726444.2786chenopodium_quinoaAUR62039371-RA:cds42.307734.2308
A4U43_C01F16970asparagus_officinalisONK8037364.179153.7313rosa_chinensisPRQ5921345.744738.2979
A4U43_C01F16970asparagus_officinalisONK8037347.263737.8109musa_acuminataMa09_p22150.437.549430.0395
A4U43_C01F16970asparagus_officinalisONK8037346.766237.8109olea_europaeaOE9A104891C231.023125.0825
A4U43_C01F16970asparagus_officinalisONK8037353.233843.2836triticum_turgidumTRITD4Av1G138930.911.77129.57096
A4U43_C01F16970asparagus_officinalisONK8037357.711446.2687triticum_dicoccoidesTRIDC4AG044620.838.283830.6931
A4U43_C01F16970asparagus_officinalisONK8037352.238841.791triticum_dicoccoidesTRIDC4BG022140.1110.94898.75912
A4U43_C01F16970asparagus_officinalisONK8037353.233843.2836triticum_dicoccoidesTRIDC4AG028310.1912.441910.1163
A4U43_C01F16970asparagus_officinalisONK8037343.781135.8209actinidia_chinensisPSS0784642.105334.4498
A4U43_C01F16970asparagus_officinalisONK8037345.273637.8109brassica_oleraceaBo6g034420.131.707326.4808
A4U43_C01F16970asparagus_officinalisONK8037362.686656.7164arabidopsis_lyratafgenesh2_kg.5__1965__AT3G55460.148.461543.8462
A4U43_C01F16970asparagus_officinalisONK8037341.293529.3532oryza_barthiiOBART11G23620.216.403211.6601
A4U43_C01F16970asparagus_officinalisONK8037346.766236.3184camelina_sativaCsa17g095140.132.752625.4355
A4U43_C01F16970asparagus_officinalisONK8037342.786131.8408eragrostis_curvulaTVU0489132.452824.1509
A4U43_C01F16970asparagus_officinalisONK8037348.258738.806coffea_canephoraCDP2127745.971636.9668
A4U43_C01F16970asparagus_officinalisONK8037322.885618.408amborella_trichopodaERN1138817.829514.3411
A4U43_C01F16970asparagus_officinalisONK8037349.253741.2935quercus_subercds-POE73520.141.078834.4398
A4U43_C01F16970asparagus_officinalisONK8037333.333327.8607ciona_savignyiENSCSAVP0000000861829.64624.7788
A4U43_C01F16970asparagus_officinalisONK8037363.184155.2239corchorus_capsularisOMO5899844.561438.9474
A4U43_C01F16970asparagus_officinalisONK8037366.169256.2189gossypium_raimondiiKJB6764346.503539.5105
A4U43_C01F16970asparagus_officinalisONK8037362.189152.7363gossypium_raimondiiKJB7392741.390735.0993
A4U43_C01F16970asparagus_officinalisONK8037349.751240.796hordeum_vulgareHORVU.MOREX.r3.7HG0748400.156.818246.5909
A4U43_C01F16970asparagus_officinalisONK8037341.79129.3532oryza_nivaraONIVA11G23140.316.600811.6601

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression