Description

Ensembl ID A4U43_C01F12640 Gene ID Accession -
Symbol Alias - Full Name uncharacterized protein
Status Confidence Length 11916 bases Strand Minus strand
Position 1 : 28841645 - 28853560 RNA binding domain RRM_1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ONK79996 RRM_1 PF00076 1.9e-52 1
ONK79996 RRM_1 PF00076 1.9e-52 2
ONK79996 RRM_1 PF00076 1.9e-52 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
A4U43_C01F12640asparagus_officinalisONK8093070.184750.3958asparagus_officinalisONK7999652.465537.6726
A4U43_C01F12640asparagus_officinalisONK7900628.571416.5899asparagus_officinalisONK7999612.22887.10059
A4U43_C01F12640asparagus_officinalisONK7018919.113611.3573asparagus_officinalisONK7999613.60958.08679
A4U43_C01F12640asparagus_officinalisONK6712822.97312.7027asparagus_officinalisONK7999616.76539.27022
A4U43_C01F12640asparagus_officinalisONK6644327.243616.1859asparagus_officinalisONK7999633.530619.9211
A4U43_C01F12640asparagus_officinalisONK7674936.819.2asparagus_officinalisONK799969.072984.73373
A4U43_C01F12640asparagus_officinalisONK7571625.084213.2997asparagus_officinalisONK7999629.388615.5819
A4U43_C01F12640asparagus_officinalisONK8181427.108414.759asparagus_officinalisONK7999617.75159.66469
A4U43_C01F12640asparagus_officinalisONK5595215.5838.29596asparagus_officinalisONK7999627.416214.5957
A4U43_C01F12640asparagus_officinalisONK6434425.090914.9091asparagus_officinalisONK7999613.60958.08679
A4U43_C01F12640asparagus_officinalisONK8000325.18815.4135asparagus_officinalisONK7999613.2158.08679
A4U43_C01F12640asparagus_officinalisONK6901227.385916.1826asparagus_officinalisONK7999613.01787.69231
A4U43_C01F12640asparagus_officinalisONK8008325.373117.4129asparagus_officinalisONK7999610.05926.90335
A4U43_C01F12640asparagus_officinalisONK7167525.079415.2381asparagus_officinalisONK7999615.58199.46746
A4U43_C01F12640asparagus_officinalisONK7286419.576710.0529asparagus_officinalisONK799967.297833.74753
A4U43_C01F12640asparagus_officinalisONK7032718.181811.4402asparagus_officinalisONK7999635.108522.0907
A4U43_C01F12640asparagus_officinalisONK5504427.868916.3934asparagus_officinalisONK7999630.177517.7515
A4U43_C01F12640asparagus_officinalisONK703268.247423.09278asparagus_officinalisONK799961.577910.591716
A4U43_C01F12640asparagus_officinalisONK7674832.367119.8068asparagus_officinalisONK7999613.2158.08679
A4U43_C01F12640asparagus_officinalisONK7408820.973812.7341asparagus_officinalisONK7999611.04546.70611
A4U43_C01F12640asparagus_officinalisONK7738122.939114.3369asparagus_officinalisONK7999612.62337.88955
A4U43_C01F12640asparagus_officinalisONK5648817.464810.1408asparagus_officinalisONK7999612.22887.10059
A4U43_C01F12640asparagus_officinalisONK7612026.842116.8421asparagus_officinalisONK7999620.118312.6233
A4U43_C01F12640asparagus_officinalisONK56109105.47826asparagus_officinalisONK7999622.682412.426
A4U43_C01F12640asparagus_officinalisONK7120712.64116.77201asparagus_officinalisONK7999611.04545.91716
A4U43_C01F12640asparagus_officinalisONK7791415.20417.65306asparagus_officinalisONK7999629.388614.7929
A4U43_C01F12640asparagus_officinalisONK7211414.27047.08154asparagus_officinalisONK7999626.232713.0178
A4U43_C01F12640asparagus_officinalisONK8162210.79555.84416asparagus_officinalisONK7999626.232714.2012
A4U43_C01F12640asparagus_officinalisONK678014.67290.934579asparagus_officinalisONK799960.9861930.197239
A4U43_C01F12640asparagus_officinalisONK6671918.27210.3399asparagus_officinalisONK7999625.443814.3984
A4U43_C01F12640asparagus_officinalisONK667203.401360.680272asparagus_officinalisONK799960.9861930.197239
A4U43_C01F12640asparagus_officinalisONK5862715.25257.67677asparagus_officinalisONK7999629.78314.9901
A4U43_C01F12640asparagus_officinalisONK7173321.684213.4737asparagus_officinalisONK7999620.315612.6233
A4U43_C01F12640asparagus_officinalisONK7414829.473715.7895asparagus_officinalisONK7999616.5688.87574
A4U43_C01F12640asparagus_officinalisONK703579.477126.04575asparagus_officinalisONK7999611.43987.29783
A4U43_C01F12640asparagus_officinalisONK6331916.62768.8993asparagus_officinalisONK7999614.00397.49507
A4U43_C01F12640asparagus_officinalisONK7035612.04066.97085asparagus_officinalisONK7999618.737710.8481

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
A4U43_C01F12640asparagus_officinalisONK7999662.327447.7318marchantia_polymorphaPTQ4458861.003946.7181
A4U43_C01F12640asparagus_officinalisONK7999670.019753.8462cannabis_sativa_femalecds.evm.model.02.149373.49956.5217
A4U43_C01F12640asparagus_officinalisONK7999665.483250.8876cannabis_sativa_femalecds.evm.model.02.147974.107157.5893
A4U43_C01F12640asparagus_officinalisONK7999669.625254.0434ficus_caricaFCD_00021961-RA:cds73.236556.8465
A4U43_C01F12640asparagus_officinalisONK7999669.625252.4655beta_vulgarisKMT0240273.849455.6485
A4U43_C01F12640asparagus_officinalisONK7999671.400455.0296citrullus_lanatusCla97C05G080470.175.103757.8838
A4U43_C01F12640asparagus_officinalisONK7999670.21753.6489theobroma_cacaoEOX9560370.355753.7549
A4U43_C01F12640asparagus_officinalisONK7999653.648942.2091cucumis_meloMELO3C005985.2.172.340456.9149
A4U43_C01F12640asparagus_officinalisONK7999660.946747.14cucumis_sativusKGN5638273.049656.5012
A4U43_C01F12640asparagus_officinalisONK7999670.414254.2406populus_trichocarpaPotri.014G104500.12.v4.174.37557.2917
A4U43_C01F12640asparagus_officinalisONK7999669.625252.6627populus_trichocarpaPotri.002G178200.3.v4.173.388855.5094
A4U43_C01F12640asparagus_officinalisONK7999668.639149.7041arabidopsis_thalianaAT4G00830.270.30350.9091
A4U43_C01F12640asparagus_officinalisONK7999669.230851.4793brassica_napusCDY5171667.630150.289
A4U43_C01F12640asparagus_officinalisONK7999665.28648.1262brassica_napusCDX7437570.27651.8047
A4U43_C01F12640asparagus_officinalisONK7999667.850150.4931brassica_napusCDY0714966.409349.4208
A4U43_C01F12640asparagus_officinalisONK7999663.708145.7594brassica_napusCDX9186168.723449.3617
A4U43_C01F12640asparagus_officinalisONK7999662.919146.1538brassica_junceacds.BjuA03g31300S71.205452.2321
A4U43_C01F12640asparagus_officinalisONK7999669.230851.4793brassica_junceacds.BjuA09g69890S68.688851.0763
A4U43_C01F12640asparagus_officinalisONK7999662.919145.1677brassica_junceacds.BjuB08g29110S70.264350.4405
A4U43_C01F12640asparagus_officinalisONK7999668.836351.8738brassica_junceacds.BjuB08g26880S65.111949.0672
A4U43_C01F12640asparagus_officinalisONK7999670.808754.4379prunus_persicaONI2357974.020656.9072
A4U43_C01F12640asparagus_officinalisONK7999670.611454.2406prunus_dulcisVVA2554373.814456.701
A4U43_C01F12640asparagus_officinalisONK7999669.625254.0434cajanus_cajanC.cajan_10951.t62.588748.5816
A4U43_C01F12640asparagus_officinalisONK7999668.836353.2544malus_domestica_goldenmRNA:MD01G006760072.256755.9006
A4U43_C01F12640asparagus_officinalisONK7999669.42853.8462malus_domestica_goldenmRNA:MD07G012990061.217447.4783
A4U43_C01F12640asparagus_officinalisONK7999667.850151.4793medicago_truncatulaAES8281571.816354.4885
A4U43_C01F12640asparagus_officinalisONK7999668.244650.8876lupinus_angustifoliusOIV9506672.083353.75
A4U43_C01F12640asparagus_officinalisONK7999667.850152.071lupinus_angustifoliusOIV9387772.117455.3459
A4U43_C01F12640asparagus_officinalisONK7999667.258451.2821lupinus_angustifoliusOIW0457171.041754.1667
A4U43_C01F12640asparagus_officinalisONK7999669.625253.0572phaseolus_vulgarisESW1100472.188155.0102
A4U43_C01F12640asparagus_officinalisONK7999669.625253.6489glycine_maxKRH6895573.084956.3147
A4U43_C01F12640asparagus_officinalisONK7999669.625253.6489glycine_maxKRG9723173.084956.3147
A4U43_C01F12640asparagus_officinalisONK7999669.625252.2682pisum_sativumPsat3g000800.3.cds73.541755.2083
A4U43_C01F12640asparagus_officinalisONK7999669.822553.6489vigna_unguiculataVigun09g005800.1.v1.272.097855.3971
A4U43_C01F12640asparagus_officinalisONK7999670.019753.6489vigna_angularisKOM2913773.958356.6667
A4U43_C01F12640asparagus_officinalisONK7999666.469451.0848helianthus_annuusmRNA:HanXRQr2_Chr16g076717172.162755.4604
A4U43_C01F12640asparagus_officinalisONK7999669.033552.2682lactuca_sativacds-PLY99880.172.614154.9793
A4U43_C01F12640asparagus_officinalisONK7999668.441850.4931solanum_lycopersicumSolyc10g009220.3.171.694252.8926
A4U43_C01F12640asparagus_officinalisONK7999670.21755.0296manihot_esculentaOAY6208973.100657.2895
A4U43_C01F12640asparagus_officinalisONK7999669.625254.8323manihot_esculentaOAY4894573.695258.0376
A4U43_C01F12640asparagus_officinalisONK7999644.378738.0671oryza_longistaminataKN539150.1_FGP00648.076941.2393
A4U43_C01F12640asparagus_officinalisONK7999628.994125.8383ananas_comosusAco024711.1.mrna175.773267.5258
A4U43_C01F12640asparagus_officinalisONK7999669.230853.4517ipomoea_trilobaitb11g23370.t473.12556.4583
A4U43_C01F12640asparagus_officinalisONK7999640.433928.7968prunus_aviumPav_co4048787.1_g010.1.mk:mrna74.007252.7076
A4U43_C01F12640asparagus_officinalisONK7999668.836352.4655chenopodium_quinoaAUR62042473-RA:cds73.784456.2368
A4U43_C01F12640asparagus_officinalisONK7999669.230852.4655rosa_chinensisPRQ5858572.97355.3015
A4U43_C01F12640asparagus_officinalisONK7999669.42851.8738nicotiana_attenuataOIS9941173.640255.0209
A4U43_C01F12640asparagus_officinalisONK7999670.21754.8323quercus_lobataQL08p046833:mrna73.402157.3196
A4U43_C01F12640asparagus_officinalisONK7999678.303764.8915musa_acuminataMa10_p08540.179.465.8
A4U43_C01F12640asparagus_officinalisONK7999663.313646.7456olea_europaeaOE9A055966C152.025938.4117
A4U43_C01F12640asparagus_officinalisONK7999633.92523.8659olea_europaeaOE9A032882C168.848.4
A4U43_C01F12640asparagus_officinalisONK7999669.033552.6627olea_europaeaOE9A097781C273.068955.7411
A4U43_C01F12640asparagus_officinalisONK7999662.524746.1538olea_europaeaOE9A083382C251.377637.9254
A4U43_C01F12640asparagus_officinalisONK7999649.309737.8698olea_europaeaOE9A114067C171.633255.0143
A4U43_C01F12640asparagus_officinalisONK7999649.309737.6726cynara_cardunculusKVH9732973.529456.1765
A4U43_C01F12640asparagus_officinalisONK7999637.672633.1361dioscorea_rotundataDRNTG_15959.183.043573.0435
A4U43_C01F12640asparagus_officinalisONK7999668.441849.9014arabidopsis_hallerig19769.t170.10151.1111
A4U43_C01F12640asparagus_officinalisONK7999669.033551.2821eutrema_salsugineumESQ3778770.850252.6316
A4U43_C01F12640asparagus_officinalisONK7999670.414254.8323pistacia_veracds-EVM0004660.174.686258.159
A4U43_C01F12640asparagus_officinalisONK7999667.652950.2959kalanchoe_fedtschenkoiKaladp0090s0071.1.v1.171.014552.795
A4U43_C01F12640asparagus_officinalisONK7999668.441852.2682kalanchoe_fedtschenkoiKaladp0022s0010.1.v1.172.442655.3236
A4U43_C01F12640asparagus_officinalisONK7999633.136127.4162saccharum_spontaneumSspon.01G0038980-1P-mRNA-1:cds65.62554.2969
A4U43_C01F12640asparagus_officinalisONK7999669.625253.4517corymbia_citriodoracds-KAF8033565.174.004256.8134
A4U43_C01F12640asparagus_officinalisONK7999670.808754.2406citrus_clementinaESR4891374.481357.0539
A4U43_C01F12640asparagus_officinalisONK7999668.639152.071citrus_clementinaESR5798672.651455.1148
A4U43_C01F12640asparagus_officinalisONK7999669.033552.6627fraxinus_excelsiorFRAEX38873_v2_000319360.3.cds73.068955.7411
A4U43_C01F12640asparagus_officinalisONK7999665.088849.5069fraxinus_excelsiorFRAEX38873_v2_000389140.1.cds68.893552.4008
A4U43_C01F12640asparagus_officinalisONK7999632.149923.8659trifolium_pratenseTp57577_TGAC_v2_mRNA490964.426947.8261
A4U43_C01F12640asparagus_officinalisONK7999653.648939.645brassica_rapa_ro18A03p033410.1_BraROA.170.284251.938
A4U43_C01F12640asparagus_officinalisONK7999656.410341.4201brassica_rapa_ro18A09p001060.1_BraROA.166.511648.8372
A4U43_C01F12640asparagus_officinalisONK7999669.822553.6489eucalyptus_grandisKCW7850974.058656.9038
A4U43_C01F12640asparagus_officinalisONK7999670.808754.2406actinidia_chinensisPSS2624873.716656.4682
A4U43_C01F12640asparagus_officinalisONK7999666.469448.5207brassica_oleraceaBo3g053320.169.628150.8264
A4U43_C01F12640asparagus_officinalisONK7999668.244650.8876brassica_oleraceaBo9g003950.167.843150.5882
A4U43_C01F12640asparagus_officinalisONK7999671.203254.8323vitis_viniferaVitvi15g00895_P00175.840358.4034
A4U43_C01F12640asparagus_officinalisONK7999668.244650.0986arabidopsis_lyratafgenesh2_kg.6__3616__AT4G00830.170.040551.417
A4U43_C01F12640asparagus_officinalisONK7999657.988241.6174camelina_sativaCsa08g053180.167.586248.5057
A4U43_C01F12640asparagus_officinalisONK7999666.272247.3373camelina_sativaCsa02g002480.169.421549.5868
A4U43_C01F12640asparagus_officinalisONK7999658.974446.3511daucus_carotaKZN1032371.702656.3549
A4U43_C01F12640asparagus_officinalisONK7999667.652949.9014coffea_canephoraCDP0862471.607552.8184
A4U43_C01F12640asparagus_officinalisONK7999659.368844.5759selaginella_moellendorffiiEFJ2283063.102747.3795
A4U43_C01F12640asparagus_officinalisONK7999659.368844.5759selaginella_moellendorffiiEFJ3081063.102747.3795
A4U43_C01F12640asparagus_officinalisONK7999661.932946.3511amborella_trichopodaERN0826165.553249.0605
A4U43_C01F12640asparagus_officinalisONK7999670.21754.6351quercus_subercds-POE55949.173.402157.1134
A4U43_C01F12640asparagus_officinalisONK7999668.047353.6489juglans_regiacds.Jr07_09280_p168.181853.7549
A4U43_C01F12640asparagus_officinalisONK7999670.611455.0296juglans_regiacds.Jr12_05910_p173.210657.0552
A4U43_C01F12640asparagus_officinalisONK7999670.611455.0296juglans_regiacds.Jr12_05920_p173.210657.0552
A4U43_C01F12640asparagus_officinalisONK7999670.611455.0296juglans_regiacds.Jr12_05930_p173.210657.0552
A4U43_C01F12640asparagus_officinalisONK7999668.047353.6489juglans_regiacds.Jr07_09290_p168.588554.0755
A4U43_C01F12640asparagus_officinalisONK7999669.822554.4379corylus_avellanaCav07g07890.t162.76648.9362
A4U43_C01F12640asparagus_officinalisONK7999670.019754.2406corchorus_capsularisOMO6420668.269252.8846
A4U43_C01F12640asparagus_officinalisONK7999669.42852.6627gossypium_raimondiiKJB4161273.486455.7411
A4U43_C01F12640asparagus_officinalisONK7999658.382640.2367chara_brauniiGBG5987757.253439.4584
A4U43_C01F12640asparagus_officinalisONK7999669.822553.4517vigna_radiataVradi05g00420.173.596756.341

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression