RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	A4A49_62332	Gene ID		Accession	-
Symbol		Alias	-	Full Name	arginine--trna ligase, chloroplasticmitochondrial
Status	Confidence	Length	17770 bases	Strand	Minus strand
Position	10 : 30146077 - 30163846	RNA binding domain	tRNA-synt_1d , Arg_tRNA_synt_N , DALR_1
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
OIS97880	tRNA-synt_1d	PF00750	2e-118	1
OIS97880	Arg_tRNA_synt_N	PF03485	4.3e-19	2
OIS97880	DALR_1	PF05746	5.2e-30	3

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	OIS97880	1959	652aa	OIS97880

Gene Model

Click here to download A4A49_62332's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download A4A49_62332's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
A4A49_62332

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
A4A49_62332

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression