Description

Ensembl ID A4A49_22407 Gene ID Accession -
Symbol CSP1_2 Alias - Full Name cold shock protein 1
Status Confidence Length 968 bases Strand Minus strand
Position scaffold01300 : 144649 - 145616 RNA binding domain CSD , OB_RNB , zf-CCHC
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
OIT31327 CSD PF00313 1.2e-24 1
OIT31327 OB_RNB PF08206 1.6e-05 2
OIT31327 zf-CCHC PF00098 2.9e-38 3
OIT31327 zf-CCHC PF00098 2.9e-38 4
OIT31327 zf-CCHC PF00098 2.9e-38 5
OIT31327 zf-CCHC PF00098 2.9e-38 6
OIT31327 zf-CCHC PF00098 2.9e-38 7

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- OIT31327 968 264aa OIT31327

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
A4A49_22407

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
A4A49_22407

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression