Ensembl ID ENSG00000213246 Gene ID 6827 Accession 11467
Gene Symbol SUPT4H1 Alias SPT4;SPT4H;SUPT4H;Supt4a Full Name SPT4 homolog, DSIF elongation factor subunit
Position 17 : 58345178 - 58353093 Length 7916 bases Strand Minus strand
Status Confidence Main interacting RNAsmRNARBP type Canonical_RBPs
Summary This gene encodes the small subunit of DRB (5,6-dichloro-1-beta-d-ribofuranosylbenzimidazole) sensitivity-inducing factor (DSIF) complex, which regulates mRNA processing and transcription elongation by RNA polymerase II. The encoded protein is localized to the nucleus and interacts with the large subunit (SUPT5H) to form the DSIF complex. Related pseudogenes have been identified on chromosomes 2 and 12. Alternatively spliced transcript variants have been found for this gene. [provided by RefSeq, Nov 2012]

ENSG00000213246 Expression In 33 Tumors

Ensembl ID Gene symbol Log2 Foldchange Pvaue Cancer
ENSG00000213246 SUPT4H1 0.52 4.99e-16 BRCA
ENSG00000213246 SUPT4H1 -0.4 1.31e-12 KICH
Ensembl ID Gene symbol Cancer types Pubmed ID
ENSG00000213246 SUPT4H1 tumor 21329510
ENSG00000213246 SUPT4H1 cancer 27461012
ENSG00000213246 SUPT4H1 pancreatic cancer 31917448
Ensembl ID Gene symbol Disease/phenotype Mutation type Mutated / Total samples Literature
Ensembl ID Gene symbol Cancer P-value Which worse show
ENSG00000213246 SUPT4H1 MESO 0.0075 low
ENSG00000213246 SUPT4H1 SARC 0.015 low
ENSG00000213246 SUPT4H1 CHOL 0.023 high
ENSG00000213246 SUPT4H1 PAAD 0.0018 low
ENSG00000213246 SUPT4H1 UCEC 0.0076 low
ENSG00000213246 SUPT4H1 THCA 0.014 low
ENSG00000213246 SUPT4H1 ACC 0.008 high
ENSG00000213246 SUPT4H1 LGG 0.0057 low
ENSG00000213246 SUPT4H1 HNSC 0.0051 high
ENSG00000213246 SUPT4H1 KIRP 0.0012 high
ENSG00000213246 SUPT4H1 KICH 0.0086 high
ENSG00000213246 SUPT4H1 BRCA 0.036 high
ENSG00000213246 SUPT4H1 UCS 0.027 low
ENSG00000213246 SUPT4H1 OV 0.0019 low
ENSG00000213246 SUPT4H1 PRAD 0.024 low
ENSG00000213246 SUPT4H1 LAML 0.0062 low
ENSG00000213246 SUPT4H1 CESC 0.0067 low
ENSG00000213246 SUPT4H1 LIHC 0.00024 high
Ensembl ID Gene symbol Cancer CNV type -log10(q-value) G-score average amplitude frequency
ENSG00000213246 SUPT4H1 LGG Amp 1.687531 0.058477 0.568330 0.070175
ENSG00000213246 SUPT4H1 PAAD Del 7.883117 0.149453 0.389079 0.271739
ENSG00000213246 SUPT4H1 SKCM Amp 3.831639 0.212656 0.549184 0.318801
ENSG00000213246 SUPT4H1 LIHC Amp 3.233582 0.172797 0.647820 0.337838
ENSG00000213246 SUPT4H1 BLCA Amp 0.935652 0.173025 0.476369 0.436275
ENSG00000213246 SUPT4H1 BRCA Amp 43.507777 0.509084 0.864632 0.356481
ENSG00000213246 SUPT4H1 UCEC Del 0.649418 0.046801 0.544675 0.139147