Ensembl ID ENSG00000204842 Gene ID 6311 Accession 10555
Gene Symbol ATXN2 Alias ATX2;SCA2;TNRC13 Full Name ataxin 2
Position 12 : 111443485 - 111599676 Length 156192 bases Strand Minus strand
Status Confidence Main interacting RNAsmRNARBP type Canonical_RBPs
Summary This gene belongs to a group of genes that is associated with microsatellite-expansion diseases, a class of neurological and neuromuscular disorders caused by expansion of short stretches of repetitive DNA. The protein encoded by this gene has two globular domains near the N-terminus, one of which contains a clathrin-mediated trans-Golgi signal and an endoplasmic reticulum exit signal. The encoded cytoplasmic protein localizes to the endoplasmic reticulum and plasma membrane, is involved in endocytosis, and modulates mTOR signals, modifying ribosomal translation and mitochondrial function. The N-terminal region of the protein contains a polyglutamine tract of 14-31 residues that can be expanded in the pathogenic state to 32-200 residues. Intermediate length expansions of this tract increase susceptibility to amyotrophic lateral sclerosis, while long expansions of this tract result in spinocerebellar ataxia-2, an autosomal-dominantly inherited, neurodegenerative disorder. Genome-wide association studies indicate that loss-of-function mutations in this gene may be associated with susceptibility to type I diabetes, obesity and hypertension. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Nov 2016]

ENSG00000204842 Expression In 33 Tumors

Ensembl ID Gene symbol Log2 Foldchange Pvaue Cancer
ENSG00000204842 ATXN2 0.77 1.09e-23 KICH
Ensembl ID Gene symbol Cancer types Pubmed ID
ENSG00000204842 ATXN2 tumors 12545161
ENSG00000204842 ATXN2 tumors 23335000
ENSG00000204842 ATXN2 ovarian cancer 23571109
ENSG00000204842 ATXN2 tumor 25721894
ENSG00000204842 ATXN2 gastric cancer 30787271
ENSG00000204842 ATXN2 lung cancers 31428775
ENSG00000204842 ATXN2 tumor 31430912
Ensembl ID Gene symbol Disease/phenotype Mutation type Mutated / Total samples Literature
Ensembl ID Gene symbol Cancer P-value Which worse show
ENSG00000204842 ATXN2 MESO 0.014 high
ENSG00000204842 ATXN2 PAAD 0.012 low
ENSG00000204842 ATXN2 ACC 0.048 high
ENSG00000204842 ATXN2 READ 0.043 high
ENSG00000204842 ATXN2 KIRP 0.05 high
ENSG00000204842 ATXN2 KICH 0.033 high
ENSG00000204842 ATXN2 THYM 0.011 low
ENSG00000204842 ATXN2 ESCA 0.002 high
ENSG00000204842 ATXN2 KIRC 0.0022 high
ENSG00000204842 ATXN2 BLCA 0.037 low
ENSG00000204842 ATXN2 LAML 0.018 low
ENSG00000204842 ATXN2 SKCM 0.0085 high
ENSG00000204842 ATXN2 LIHC 4e-04 high
Ensembl ID Gene symbol Cancer CNV type -log10(q-value) G-score average amplitude frequency
ENSG00000204842 ATXN2 CHOL Del 0.852431 0.219537 0.589045 0.222222
ENSG00000204842 ATXN2 LUAD Del 0.779862 0.052244 0.282622 0.240310
ENSG00000204842 ATXN2 LGG Del 1.007269 0.042420 0.422044 0.124756
ENSG00000204842 ATXN2 PAAD Del 1.358045 0.058840 0.351339 0.222826
ENSG00000204842 ATXN2 SKCM Del 1.124428 0.073750 0.433577 0.242507
ENSG00000204842 ATXN2 BLCA Amp 0.910677 0.172167 0.539346 0.257353
ENSG00000204842 ATXN2 BRCA Del 3.100247 0.082001 0.379360 0.190741
ENSG00000204842 ATXN2 OV Del 3.005200 0.219335 0.553657 0.326425