Ensembl ID ENSG00000204574 Gene ID 23 Accession 70
Gene Symbol ABCF1 Alias ABC27;ABC50 Full Name ATP binding cassette subfamily F member 1
Position 6 : 30571393 - 30597179 Length 25787 bases Strand Plus strand
Status Confidence Main interacting RNAsmRNARBP type Non-canonical_RBPs
Summary The protein encoded by this gene is a member of the superfamily of ATP-binding cassette (ABC) transporters. ABC proteins transport various molecules across extra- and intra-cellular membranes. ABC genes are divided into seven distinct subfamilies (ABC1, MDR/TAP, MRP, ALD, OABP, GCN20, White). This protein is a member of the GCN20 subfamily. Unlike other members of the superfamily, this protein lacks the transmembrane domains which are characteristic of most ABC transporters. This protein may be regulated by tumor necrosis factor-alpha and play a role in enhancement of protein synthesis and the inflammation process. [provided by RefSeq, Jul 2008]

ENSG00000204574 Expression In 33 Tumors

Ensembl ID Gene symbol Log2 Foldchange Pvaue Cancer
ENSG00000204574 ABCF1 -0.4 3.31e-16 KIRC
ENSG00000204574 ABCF1 0.44 2.20e-19 BRCA
Ensembl ID Gene symbol Cancer types Pubmed ID
ENSG00000204574 ABCF1 tumors 23556449
ENSG00000204574 ABCF1 Colorectal Cancer 25929864
ENSG00000204574 ABCF1 cancer 31100412
ENSG00000204574 ABCF1 Cancer 31487824
Ensembl ID Gene symbol Disease/phenotype Mutation type Mutated / Total samples Literature
Ensembl ID Gene symbol Cancer P-value Which worse show
ENSG00000204574 ABCF1 MESO 0.045 high
ENSG00000204574 ABCF1 SARC 0.00015 high
ENSG00000204574 ABCF1 CHOL 0.02 high
ENSG00000204574 ABCF1 UVM 0.045 low
ENSG00000204574 ABCF1 UCEC 0.0023 high
ENSG00000204574 ABCF1 LGG 0.0031 low
ENSG00000204574 ABCF1 HNSC 0.019 high
ENSG00000204574 ABCF1 READ 0.007 low
ENSG00000204574 ABCF1 KICH 0.02 high
ENSG00000204574 ABCF1 PCPG 0.046 high
ENSG00000204574 ABCF1 COAD 0.02 high
ENSG00000204574 ABCF1 OV 0.035 low
ENSG00000204574 ABCF1 DLBC 0.00084 low
ENSG00000204574 ABCF1 KIRC 0.0026 low
ENSG00000204574 ABCF1 LAML 0.0079 high
ENSG00000204574 ABCF1 GBM 0.027 low
ENSG00000204574 ABCF1 SKCM 0.00015 high
ENSG00000204574 ABCF1 LIHC 0.0031 high
Ensembl ID Gene symbol Cancer CNV type -log10(q-value) G-score average amplitude frequency
ENSG00000204574 ABCF1 CESC Amp 2.794576 0.205381 0.640310 0.277966
ENSG00000204574 ABCF1 SKCM Amp 2.045751 0.162738 0.749708 0.514986
ENSG00000204574 ABCF1 LIHC Amp 2.272449 0.152432 0.768726 0.405405
ENSG00000204574 ABCF1 BLCA Amp 0.832589 0.168872 0.484870 0.281863
ENSG00000204574 ABCF1 STAD Amp 0.668683 0.129145 0.467759 0.238095
ENSG00000204574 ABCF1 UVM Amp 2.411362 0.267714 1.168829 0.537500
ENSG00000204574 ABCF1 OV Amp 1.251533 0.349124 0.666152 0.473230