Ensembl ID ENSG00000198952 Gene ID 23381 Accession 24644
Gene Symbol SMG5 Alias EST1B;SMG-5;LPTSRP1;LPTS-RP1 Full Name SMG5 nonsense mediated mRNA decay factor
Position 1 : 156249224 - 156282825 Length 33602 bases Strand Minus strand
Status Confidence Main interacting RNAsmRNARBP type Canonical_RBPs
Summary SMG5 is involved in nonsense-mediated mRNA decay (Ohnishi et al., 2003 [PubMed 14636577]).[supplied by OMIM, Mar 2008]

ENSG00000198952 Expression In 33 Tumors

Ensembl ID Gene symbol Log2 Foldchange Pvaue Cancer
ENSG00000198952 SMG5 0.74 3.96e-40 BRCA
ENSG00000198952 SMG5 0.39 2.56e-13 PRAD
ENSG00000198952 SMG5 1.33 1.54e-42 LIHC
ENSG00000198952 SMG5 0.89 3.53e-19 UCEC
ENSG00000198952 SMG5 0.75 2.68e-24 LUAD
Ensembl ID Gene symbol Cancer types Pubmed ID
ENSG00000198952 SMG5 cancer 21571633
Ensembl ID Gene symbol Disease/phenotype Mutation type Mutated / Total samples Literature
Ensembl ID Gene symbol Cancer P-value Which worse show
ENSG00000198952 SMG5 STAD 0.0018 low
ENSG00000198952 SMG5 UVM 0.037 high
ENSG00000198952 SMG5 PAAD 0.016 low
ENSG00000198952 SMG5 UCEC 0.00017 high
ENSG00000198952 SMG5 ACC 0.022 high
ENSG00000198952 SMG5 HNSC 0.033 low
ENSG00000198952 SMG5 READ 0.01 low
ENSG00000198952 SMG5 KICH 0.014 high
ENSG00000198952 SMG5 PCPG 0.026 high
ENSG00000198952 SMG5 THYM 0.0017 high
ENSG00000198952 SMG5 BRCA 0.018 high
ENSG00000198952 SMG5 COAD 0.05 high
ENSG00000198952 SMG5 ESCA 0.032 high
ENSG00000198952 SMG5 DLBC 0.029 low
ENSG00000198952 SMG5 KIRC 0.026 high
ENSG00000198952 SMG5 BLCA 0.039 low
ENSG00000198952 SMG5 LAML 0.0038 high
ENSG00000198952 SMG5 SKCM 0.02 high
ENSG00000198952 SMG5 CESC 0.033 low
Ensembl ID Gene symbol Cancer CNV type -log10(q-value) G-score average amplitude frequency
ENSG00000198952 SMG5 CHOL Amp 0.963900 0.479130 0.983432 0.638889
ENSG00000198952 SMG5 LUSC Amp 1.989044 0.235242 0.527242 0.520958
ENSG00000198952 SMG5 LUAD Amp 15.281065 0.342347 0.583033 0.732558
ENSG00000198952 SMG5 LGG Amp 1.091718 0.049842 0.555098 0.079922
ENSG00000198952 SMG5 CESC Amp 2.224565 0.186473 0.612657 0.538983
ENSG00000198952 SMG5 UCS Amp 2.699658 0.789599 0.871902 0.714286
ENSG00000198952 SMG5 SARC Amp 1.930290 0.325917 0.655787 0.365759
ENSG00000198952 SMG5 GBM Amp 0.821541 0.069390 0.524349 0.180243
ENSG00000198952 SMG5 SKCM Amp 2.469309 0.174793 0.676460 0.542234
ENSG00000198952 SMG5 LIHC Amp 16.430998 0.375836 0.896722 0.751351
ENSG00000198952 SMG5 PCPG Amp 0.826699 0.073017 0.648739 0.160494
ENSG00000198952 SMG5 DLBC Amp 1.852987 0.292853 0.670338 0.270833
ENSG00000198952 SMG5 BLCA Amp 7.620711 0.344291 0.568675 0.450980
ENSG00000198952 SMG5 BRCA Amp 17.430289 0.329320 0.779425 0.726852
ENSG00000198952 SMG5 STAD Amp 1.067368 0.143082 0.439606 0.356009
ENSG00000198952 SMG5 UCEC Amp 15.387035 0.305393 0.892248 0.473098
ENSG00000198952 SMG5 OV Amp 9.904917 0.545356 0.728530 0.604491