Ensembl ID
ENSG00000167088
Gene ID
6632
Accession
11158
Gene Symbol
SNRPD1
Alias
SMD1;SNRPD;Sm-D1;HsT2456
Full Name
small nuclear ribonucleoprotein D1 polypeptide
Position
18 : 21612314 - 21633520
Length
21207 bases
Strand
Plus strand
Status
Confidence
Main interacting RNAs snRNA RBP type
Canonical_RBPs
Summary
This gene encodes a small nuclear ribonucleoprotein that belongs to the SNRNP core protein family. The protein may act as a charged protein scaffold to promote SNRNP assembly or strengthen SNRNP-SNRNP interactions through nonspecific electrostatic contacts with RNA. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, May 2014]
ENSG00000167088 Expression In 33 Tumors
Ensembl ID
Gene symbol
Log2 Foldchange
Pvaue
Cancer
ENSG00000167088
SNRPD1
0.35
5.48e-13
KIRC
ENSG00000167088
SNRPD1
0.85
1.66e-44
BRCA
ENSG00000167088
SNRPD1
0.83
1.84e-20
COAD
ENSG00000167088
SNRPD1
1.30
3.51e-49
LUSC
ENSG00000167088
SNRPD1
0.73
3.24e-12
LIHC
ENSG00000167088
SNRPD1
1.08
2.62e-14
STAD
ENSG00000167088
SNRPD1
1.04
3.58e-22
UCEC
ENSG00000167088
SNRPD1
0.79
9.15e-18
LUAD
Ensembl ID
Gene symbol
Cancer types
Pubmed ID
ENSG00000167088
SNRPD1
cancer
23358685
ENSG00000167088
SNRPD1
breast cancer
29363793
Ensembl ID
Gene symbol
Disease/phenotype
Mutation type
Mutated / Total samples
Literature
Ensembl ID
Gene symbol
Cancer
P-value
Which worse
show
ENSG00000167088
SNRPD1
MESO
0.00046
high
show
ENSG00000167088
SNRPD1
STAD
0.039
low
show
ENSG00000167088
SNRPD1
UVM
0.0078
high
show
ENSG00000167088
SNRPD1
PAAD
0.022
high
show
ENSG00000167088
SNRPD1
LGG
0.0061
low
show
ENSG00000167088
SNRPD1
LUSC
0.0011
low
show
ENSG00000167088
SNRPD1
KIRP
0.048
low
show
ENSG00000167088
SNRPD1
KICH
0.0074
high
show
ENSG00000167088
SNRPD1
LUAD
0.012
high
show
ENSG00000167088
SNRPD1
THYM
0.0011
low
show
ENSG00000167088
SNRPD1
BRCA
0.016
low
show
ENSG00000167088
SNRPD1
DLBC
0.0015
low
show
ENSG00000167088
SNRPD1
PRAD
0.05
high
show
Ensembl ID
Gene symbol
Cancer
CNV type
-log10(q-value)
G-score
average amplitude
frequency
ENSG00000167088
SNRPD1
PAAD
Amp
7.476420
0.272454
0.643330
0.266304
ENSG00000167088
SNRPD1
ESCA
Amp
1.503371
0.310793
0.716338
0.293478
ENSG00000167088
SNRPD1
HNSC
Amp
0.646699
0.113817
0.507851
0.203065
ENSG00000167088
SNRPD1
STAD
Amp
8.894812
0.309645
0.699937
0.285714
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