Ensembl ID ENSG00000149273 Gene ID 6188 Accession 10420
Gene Symbol RPS3 Alias S3;uS3 Full Name ribosomal protein S3
Position 11 : 75399518 - 75422280 Length 22763 bases Strand Plus strand
Status Confidence Main interacting RNAsrRNARBP type Canonical_RBPs
Summary Ribosomes, the organelles that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit. Together these subunits are composed of 4 RNA species and approximately 80 structurally distinct proteins. This gene encodes a ribosomal protein that is a component of the 40S subunit, where it forms part of the domain where translation is initiated. The protein belongs to the S3P family of ribosomal proteins. Studies of the mouse and rat proteins have demonstrated that the protein has an extraribosomal role as an endonuclease involved in the repair of UV-induced DNA damage. The protein appears to be located in both the cytoplasm and nucleus but not in the nucleolus. Higher levels of expression of this gene in colon adenocarcinomas and adenomatous polyps compared to adjacent normal colonic mucosa have been observed. This gene is co-transcribed with the small nucleolar RNA genes U15A and U15B, which are located in its first and fifth introns, respectively. As is typical for genes encoding ribosomal proteins, there are multiple processed pseudogenes of this gene dispersed through the genome. Multiple alternatively spliced transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, May 2012]

ENSG00000149273 Expression In 33 Tumors

Ensembl ID Gene symbol Log2 Foldchange Pvaue Cancer
ENSG00000149273 RPS3 0.84 2.91e-27 KIRC
Ensembl ID Gene symbol Cancer types Pubmed ID
ENSG00000149273 RPS3 tumor 24708985
ENSG00000149273 RPS3 tumor 26336993
ENSG00000149273 RPS3 breast cancer 29048653
ENSG00000149273 RPS3 breast cancer 30348748
ENSG00000149273 RPS3 tumor 30517713
ENSG00000149273 RPS3 tumor 30819254
Ensembl ID Gene symbol Disease/phenotype Mutation type Mutated / Total samples Literature
Ensembl ID Gene symbol Cancer P-value Which worse show
ENSG00000149273 RPS3 SARC 0.048 high
ENSG00000149273 RPS3 PAAD 0.004 high
ENSG00000149273 RPS3 UCEC 0.0079 low
ENSG00000149273 RPS3 THCA 0.0024 low
ENSG00000149273 RPS3 HNSC 0.01 high
ENSG00000149273 RPS3 READ 0.00025 low
ENSG00000149273 RPS3 KICH 0.011 high
ENSG00000149273 RPS3 PCPG 0.00065 high
ENSG00000149273 RPS3 BRCA 0.011 low
ENSG00000149273 RPS3 KIRC 0.0081 high
ENSG00000149273 RPS3 LAML 0.013 high
ENSG00000149273 RPS3 GBM 0.034 low
ENSG00000149273 RPS3 SKCM 0.0043 high
ENSG00000149273 RPS3 CESC 0.011 high
ENSG00000149273 RPS3 LIHC 0.024 high
Ensembl ID Gene symbol Cancer CNV type -log10(q-value) G-score average amplitude frequency
ENSG00000149273 RPS3 LUAD Amp 1.201563 0.130670 0.432163 0.310078
ENSG00000149273 RPS3 ESCA Amp 5.431179 0.493604 0.857511 0.298913
ENSG00000149273 RPS3 SKCM Amp 5.228845 0.248542 0.807140 0.163488
ENSG00000149273 RPS3 HNSC Amp 6.464170 0.226513 0.602676 0.222222
ENSG00000149273 RPS3 BLCA Amp 0.676278 0.162506 0.517108 0.213235
ENSG00000149273 RPS3 BRCA Amp 31.621170 0.432408 0.905279 0.233333
ENSG00000149273 RPS3 STAD Amp 0.696216 0.130263 0.479084 0.226757
ENSG00000149273 RPS3 UCEC Amp 0.666571 0.101932 0.601168 0.096475
ENSG00000149273 RPS3 OV Amp 11.009120 0.563932 0.776428 0.412781