Ensembl ID ENSG00000145216 Gene ID 81608 Accession 19124
Gene Symbol FIP1L1 Alias Rhe;FIP1;hFip1 Full Name factor interacting with PAPOLA and CPSF1
Position 4 : 53377569 - 53464381 Length 86813 bases Strand Plus strand
Status Confidence Main interacting RNAsmRNARBP type Canonical_RBPs
Summary This gene encodes a subunit of the CPSF (cleavage and polyadenylation specificity factor) complex that polyadenylates the 3' end of mRNA precursors. This gene, the homolog of yeast Fip1 (factor interacting with PAP), binds to U-rich sequences of pre-mRNA and stimulates poly(A) polymerase activity. Its N-terminus contains a PAP-binding site and its C-terminus an RNA-binding domain. An interstitial chromosomal deletion on 4q12 creates an in-frame fusion of human genes FIP1L1 and PDGFRA (platelet-derived growth factor receptor, alpha). The FIP1L1-PDGFRA fusion gene encodes a constitutively activated tyrosine kinase that joins the first 233 amino acids of FIP1L1 to the last 523 amino acids of PDGFRA. This gene fusion and chromosomal deletion is the cause of some forms of idiopathic hypereosinophilic syndrome (HES). This syndrome, recently reclassified as chronic eosinophilic leukemia (CEL), is responsive to treatment with tyrosine kinase inhibitors. Alternative splicing results in multiple transcript variants encoding distinct isoforms. [provided by RefSeq, Oct 2008]

ENSG00000145216 Expression In 33 Tumors

Ensembl ID Gene symbol Log2 Foldchange Pvaue Cancer
ENSG00000145216 FIP1L1 0.27 2.96e-14 BRCA
ENSG00000145216 FIP1L1 0.67 6.31e-16 LUSC
Ensembl ID Gene symbol Cancer types Pubmed ID
ENSG00000145216 FIP1L1 tumor 17541270
ENSG00000145216 FIP1L1 tumours 18686281
ENSG00000145216 FIP1L1 cancer 19671059
ENSG00000145216 FIP1L1 tumour 19789626
ENSG00000145216 FIP1L1 cancer 20806817
ENSG00000145216 FIP1L1 tumor 21713766
ENSG00000145216 FIP1L1 cancer 22279048
ENSG00000145216 FIP1L1 gastrointestinal stromal tumors 24618081
ENSG00000145216 FIP1L1 acute myeloid leukemia (AML) 24669761
ENSG00000145216 FIP1L1 tumors 26700815
ENSG00000145216 FIP1L1 tumor 28754985
ENSG00000145216 FIP1L1 tumor 28885361
ENSG00000145216 FIP1L1 extramedullary myeloid tumor 29310833
ENSG00000145216 FIP1L1 cancer 31586988
Ensembl ID Gene symbol Disease/phenotype Mutation type Mutated / Total samples Literature
ENSG00000145216 FIP1L1 basal cell carcinoma missense_variant 2.941% (2/68) 1 entry
ENSG00000145216 FIP1L1 clear cell renal carcinoma sequence_alteration 0.4422% (7/1583) 1 entry
ENSG00000145216 FIP1L1 bladder transitional cell carcinoma missense_variant 0.8969% (4/446) 1 entry
ENSG00000145216 FIP1L1 brain glioblastoma sequence_alteration 0.2475% (3/1212) 2 entries
ENSG00000145216 FIP1L1 angiosarcoma sequence_alteration 4.255% (2/47) 1 entry
ENSG00000145216 FIP1L1 nasopharyngeal squamous cell carcinoma frameshift_variant 2.778% (5/180) 1 entry
ENSG00000145216 FIP1L1 breast carcinoma missense_variant 0.4749% (7/1474) 1 entry
ENSG00000145216 FIP1L1 breast ductal adenocarcinoma missense_variant 2.592% (41/1582) 1 entry
ENSG00000145216 FIP1L1 prostate carcinoma missense_variant 2.479% (12/484) 2 entries
ENSG00000145216 FIP1L1 colon adenocarcinoma sequence_alteration 2.49% (31/1245) 4 entries
ENSG00000145216 FIP1L1 ovarian serous adenocarcinoma missense_variant 0.2407% (2/831) 1 entry
ENSG00000145216 FIP1L1 lung adenocarcinoma missense_variant 0.5043% (13/2578) 4 entries
ENSG00000145216 FIP1L1 nasopharyngeal squamous cell carcinoma missense_variant 2.778% (5/180) 1 entry
ENSG00000145216 FIP1L1 cecum adenocarcinoma frameshift_variant 4.183% (11/263) 1 entry
ENSG00000145216 FIP1L1 cecum adenocarcinoma sequence_alteration 4.183% (11/263) 1 entry
ENSG00000145216 FIP1L1 diffuse gastric adenocarcinoma sequence_alteration 3.659% (3/82) 1 entry
ENSG00000145216 FIP1L1 breast ductal adenocarcinoma sequence_alteration 2.592% (41/1582) 2 entries
ENSG00000145216 FIP1L1 skin melanoma missense_variant 0.8628% (10/1159) 2 entries
ENSG00000145216 FIP1L1 small cell lung carcinoma missense_variant 1.119% (5/447) 3 entries
ENSG00000145216 FIP1L1 melanoma frameshift_variant 2.759% (4/145) 1 entry
ENSG00000145216 FIP1L1 colorectal adenocarcinoma missense_variant 2.946% (34/1154) 2 entries
ENSG00000145216 FIP1L1 small cell lung carcinoma sequence_alteration 1.119% (5/447) 2 entries
ENSG00000145216 FIP1L1 clear cell renal carcinoma missense_variant 0.4422% (7/1583) 1 entry
ENSG00000145216 FIP1L1 prostate carcinoma sequence_alteration 2.479% (12/484) 1 entry
ENSG00000145216 FIP1L1 colon adenocarcinoma stop_gained 2.49% (31/1245) 2 entries
ENSG00000145216 FIP1L1 colorectal adenocarcinoma sequence_alteration 2.946% (34/1154) 2 entries
ENSG00000145216 FIP1L1 colon adenocarcinoma frameshift_variant 2.49% (31/1245) 3 entries
ENSG00000145216 FIP1L1 hepatocellular carcinoma missense_variant 1.117% (11/985) 1 entry
ENSG00000145216 FIP1L1 female breast carcinoma missense_variant 0.5115% (2/391) 2 entries
ENSG00000145216 FIP1L1 colon adenocarcinoma missense_variant 2.49% (31/1245) 4 entries
ENSG00000145216 FIP1L1 central nervous system primitive neuroectodermal neoplasm sequence_alteration 0.6696% (3/448) 1 entry
ENSG00000145216 FIP1L1 small cell lung carcinoma stop_gained 1.119% (5/447) 2 entries
ENSG00000145216 FIP1L1 bladder transitional cell carcinoma sequence_alteration 0.8969% (4/446) 1 entry
ENSG00000145216 FIP1L1 prostate adenocarcinoma sequence_alteration 1.443% (31/2149) 1 entry
ENSG00000145216 FIP1L1 squamous cell lung carcinoma sequence_alteration 0.804% (8/995) 1 entry
ENSG00000145216 FIP1L1 lung adenocarcinoma sequence_alteration 0.5043% (13/2578) 1 entry
ENSG00000145216 FIP1L1 oral squamous cell carcinoma missense_variant 1.145% (3/262) 1 entry
ENSG00000145216 FIP1L1 esophageal squamous cell carcinoma missense_variant 0.4386% (3/684) 1 entry
ENSG00000145216 FIP1L1 Pleural Epithelioid Mesothelioma missense_variant 0.7407% (1/135) 1 entry
ENSG00000145216 FIP1L1 bronchoalveolar adenocarcinoma missense_variant 4.545% (1/22) 1 entry
ENSG00000145216 FIP1L1 colorectal adenocarcinoma stop_gained 2.946% (34/1154) 1 entry
ENSG00000145216 FIP1L1 oral squamous cell carcinoma stop_gained 1.145% (3/262) 1 entry
ENSG00000145216 FIP1L1 large cell lung carcinoma missense_variant 5.263% (1/19) 1 entry
ENSG00000145216 FIP1L1 clear cell renal carcinoma frameshift_variant 0.4422% (7/1583) 1 entry
ENSG00000145216 FIP1L1 gastric intestinal type adenocarcinoma stop_gained 2.353% (2/85) 1 entry
ENSG00000145216 FIP1L1 diffuse gastric adenocarcinoma frameshift_variant 3.659% (3/82) 1 entry
ENSG00000145216 FIP1L1 nasopharyngeal squamous cell carcinoma sequence_alteration 2.778% (5/180) 1 entry
ENSG00000145216 FIP1L1 esophageal squamous cell carcinoma frameshift_variant 0.4386% (3/684) 1 entry
ENSG00000145216 FIP1L1 gastric intestinal type adenocarcinoma missense_variant 2.353% (2/85) 1 entry
ENSG00000145216 FIP1L1 T-cell acute lymphoblastic leukemia missense_variant 0.2625% (1/381) 1 entry
ENSG00000145216 FIP1L1 osteosarcoma missense_variant 0.6579% (1/152) 1 entry
ENSG00000145216 FIP1L1 metaplastic breast carcinoma missense_variant 1.667% (1/60) 1 entry
ENSG00000145216 FIP1L1 breast ductal adenocarcinoma frameshift_variant 2.592% (41/1582) 1 entry
ENSG00000145216 FIP1L1 lung adenocarcinoma stop_gained 0.5043% (13/2578) 1 entry
ENSG00000145216 FIP1L1 cecum adenocarcinoma missense_variant 4.183% (11/263) 1 entry
ENSG00000145216 FIP1L1 T-cell acute lymphoblastic leukemia sequence_alteration 0.2625% (1/381) 1 entry
Ensembl ID Gene symbol Cancer P-value Which worse show
ENSG00000145216 FIP1L1 MESO 0.042 high
ENSG00000145216 FIP1L1 SARC 0.00028 high
ENSG00000145216 FIP1L1 THCA 0.03 low
ENSG00000145216 FIP1L1 ACC 0.0022 high
ENSG00000145216 FIP1L1 LGG 0.016 high
ENSG00000145216 FIP1L1 HNSC 0.02 high
ENSG00000145216 FIP1L1 READ 0.0083 low
ENSG00000145216 FIP1L1 KIRP 0.0073 high
ENSG00000145216 FIP1L1 KICH 0.00028 high
ENSG00000145216 FIP1L1 LUAD 0.023 high
ENSG00000145216 FIP1L1 PCPG 0.05 high
ENSG00000145216 FIP1L1 THYM 0.002 low
ENSG00000145216 FIP1L1 UCS 0.0071 low
ENSG00000145216 FIP1L1 OV 0.03 low
ENSG00000145216 FIP1L1 KIRC 0.0036 low
ENSG00000145216 FIP1L1 PRAD 0.043 high
ENSG00000145216 FIP1L1 TGCT 0.0024 low
ENSG00000145216 FIP1L1 CESC 0.049 high
ENSG00000145216 FIP1L1 LIHC 0.00014 high
Ensembl ID Gene symbol Cancer CNV type -log10(q-value) G-score average amplitude frequency
ENSG00000145216 FIP1L1 LUSC Amp 7.853582 0.361339 0.739621 0.225549
ENSG00000145216 FIP1L1 LGG Amp 13.012499 0.180106 1.699267 0.050682
ENSG00000145216 FIP1L1 GBM Amp 57.715645 0.611670 1.786889 0.152513
ENSG00000145216 FIP1L1 TGCT Amp 6.781337 0.333408 1.156317 0.120000