Ensembl ID
ENSG00000144580
Gene ID
9125
Accession
10445
Gene Symbol
CNOT9
Alias
RCD1;CAF40;CT129;RCD-1;RQCD1
Full Name
CCR4-NOT transcription complex subunit 9
Position
2 : 218568580 - 218597080
Length
28501 bases
Strand
Plus strand
Status
Confidence
Main interacting RNAs mRNA RBP type
Non-canonical_RBPs
Summary
This gene encodes a member of the highly conserved RCD1 protein family. The encoded protein is a transcriptional cofactor and a core protein of the CCR4-NOT complex. It may be involved in signal transduction as well as retinoic acid-regulated cell differentiation and development. Alternatively spliced transcript variants have been described for this gene. [provided by RefSeq, Oct 2012]
ENSG00000144580 Expression In 33 Tumors
Ensembl ID
Gene symbol
Log2 Foldchange
Pvaue
Cancer
ENSG00000144580
CNOT9
0.57
5.62e-55
KIRC
ENSG00000144580
CNOT9
0.58
1.08e-43
BRCA
ENSG00000144580
CNOT9
0.69
3.66e-40
COAD
ENSG00000144580
CNOT9
0.79
2.25e-35
LUSC
ENSG00000144580
CNOT9
0.73
4.44e-30
UCEC
ENSG00000144580
CNOT9
0.41
1.24e-15
LUAD
Ensembl ID
Gene symbol
Cancer types
Pubmed ID
ENSG00000144580
CNOT9
breast cancer
19724902
ENSG00000144580
CNOT9
breast cancer
25191340
ENSG00000144580
CNOT9
tumor
25544760
ENSG00000144580
CNOT9
triple-negative breast cancer
29924958
ENSG00000144580
CNOT9
tumor
8104536
Ensembl ID
Gene symbol
Disease/phenotype
Mutation type
Mutated / Total samples
Literature
Ensembl ID
Gene symbol
Cancer
P-value
Which worse
show
ENSG00000144580
CNOT9
SARC
0.023
high
show
ENSG00000144580
CNOT9
STAD
0.01
low
show
ENSG00000144580
CNOT9
UCEC
0.0012
high
show
ENSG00000144580
CNOT9
HNSC
0.012
low
show
ENSG00000144580
CNOT9
KICH
0.041
low
show
ENSG00000144580
CNOT9
LUAD
0.0035
high
show
ENSG00000144580
CNOT9
PCPG
0.013
high
show
ENSG00000144580
CNOT9
THYM
9e-04
low
show
ENSG00000144580
CNOT9
BRCA
0.05
low
show
ENSG00000144580
CNOT9
OV
0.027
low
show
ENSG00000144580
CNOT9
TGCT
0.023
low
show
ENSG00000144580
CNOT9
BLCA
0.001
low
show
ENSG00000144580
CNOT9
LAML
0.021
high
show
ENSG00000144580
CNOT9
SKCM
0.01
high
show
Ensembl ID
Gene symbol
Cancer
CNV type
-log10(q-value)
G-score
average amplitude
frequency
ENSG00000144580
CNOT9
LUSC
Del
16.500133
0.190382
0.395357
0.293413
ENSG00000144580
CNOT9
CESC
Del
32.990742
0.339842
0.534997
0.393220
ENSG00000144580
CNOT9
KIRP
Amp
1.259300
0.069152
0.554374
0.163194
ENSG00000144580
CNOT9
KIRP
Del
2.524016
0.044359
0.632629
0.041667
ENSG00000144580
CNOT9
SARC
Del
4.854135
0.214002
0.493167
0.342412
ENSG00000144580
CNOT9
ESCA
Del
1.617924
0.122387
0.366425
0.244565
ENSG00000144580
CNOT9
HNSC
Del
20.972421
0.176294
0.387179
0.277778
ENSG00000144580
CNOT9
BLCA
Del
22.664701
0.266151
0.432052
0.463235
ENSG00000144580
CNOT9
KIRC
Del
9.228160
0.063975
0.539769
0.083333
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