Ensembl ID ENSG00000144580 Gene ID 9125 Accession 10445
Gene Symbol CNOT9 Alias RCD1;CAF40;CT129;RCD-1;RQCD1 Full Name CCR4-NOT transcription complex subunit 9
Position 2 : 218568580 - 218597080 Length 28501 bases Strand Plus strand
Status Confidence Main interacting RNAsmRNARBP type Non-canonical_RBPs
Summary This gene encodes a member of the highly conserved RCD1 protein family. The encoded protein is a transcriptional cofactor and a core protein of the CCR4-NOT complex. It may be involved in signal transduction as well as retinoic acid-regulated cell differentiation and development. Alternatively spliced transcript variants have been described for this gene. [provided by RefSeq, Oct 2012]

ENSG00000144580 Expression In 33 Tumors

Ensembl ID Gene symbol Log2 Foldchange Pvaue Cancer
ENSG00000144580 CNOT9 0.57 5.62e-55 KIRC
ENSG00000144580 CNOT9 0.58 1.08e-43 BRCA
ENSG00000144580 CNOT9 0.69 3.66e-40 COAD
ENSG00000144580 CNOT9 0.79 2.25e-35 LUSC
ENSG00000144580 CNOT9 0.73 4.44e-30 UCEC
ENSG00000144580 CNOT9 0.41 1.24e-15 LUAD
Ensembl ID Gene symbol Cancer types Pubmed ID
ENSG00000144580 CNOT9 breast cancer 19724902
ENSG00000144580 CNOT9 breast cancer 25191340
ENSG00000144580 CNOT9 tumor 25544760
ENSG00000144580 CNOT9 triple-negative breast cancer 29924958
ENSG00000144580 CNOT9 tumor 8104536
Ensembl ID Gene symbol Disease/phenotype Mutation type Mutated / Total samples Literature
Ensembl ID Gene symbol Cancer P-value Which worse show
ENSG00000144580 CNOT9 SARC 0.023 high
ENSG00000144580 CNOT9 STAD 0.01 low
ENSG00000144580 CNOT9 UCEC 0.0012 high
ENSG00000144580 CNOT9 HNSC 0.012 low
ENSG00000144580 CNOT9 KICH 0.041 low
ENSG00000144580 CNOT9 LUAD 0.0035 high
ENSG00000144580 CNOT9 PCPG 0.013 high
ENSG00000144580 CNOT9 THYM 9e-04 low
ENSG00000144580 CNOT9 BRCA 0.05 low
ENSG00000144580 CNOT9 OV 0.027 low
ENSG00000144580 CNOT9 TGCT 0.023 low
ENSG00000144580 CNOT9 BLCA 0.001 low
ENSG00000144580 CNOT9 LAML 0.021 high
ENSG00000144580 CNOT9 SKCM 0.01 high
Ensembl ID Gene symbol Cancer CNV type -log10(q-value) G-score average amplitude frequency
ENSG00000144580 CNOT9 LUSC Del 16.500133 0.190382 0.395357 0.293413
ENSG00000144580 CNOT9 CESC Del 32.990742 0.339842 0.534997 0.393220
ENSG00000144580 CNOT9 KIRP Amp 1.259300 0.069152 0.554374 0.163194
ENSG00000144580 CNOT9 KIRP Del 2.524016 0.044359 0.632629 0.041667
ENSG00000144580 CNOT9 SARC Del 4.854135 0.214002 0.493167 0.342412
ENSG00000144580 CNOT9 ESCA Del 1.617924 0.122387 0.366425 0.244565
ENSG00000144580 CNOT9 HNSC Del 20.972421 0.176294 0.387179 0.277778
ENSG00000144580 CNOT9 BLCA Del 22.664701 0.266151 0.432052 0.463235
ENSG00000144580 CNOT9 KIRC Del 9.228160 0.063975 0.539769 0.083333