Ensembl ID ENSG00000142541 Gene ID 23521 Accession 10304
Gene Symbol RPL13A Alias L13A;uL13;TSTA1 Full Name ribosomal protein L13a
Position 19 : 49487510 - 49493057 Length 5548 bases Strand Plus strand
Status Confidence Main interacting RNAsrRNARBP type Canonical_RBPs
Summary Ribosomes, the organelles that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit. Together these subunits are composed of 4 RNA species and approximately 80 structurally distinct proteins. This gene encodes a member of the L13P family of ribosomal proteins that is a component of the 60S subunit. The encoded protein also plays a role in the repression of inflammatory genes as a component of the IFN-gamma-activated inhibitor of translation (GAIT) complex. This gene is co-transcribed with the small nucleolar RNA genes U32, U33, U34, and U35, which are located in the second, fourth, fifth, and sixth introns, respectively. As is typical for genes encoding ribosomal proteins, there are multiple processed pseudogenes of this gene dispersed throughout the genome. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene. [provided by RefSeq, Jul 2012]

ENSG00000142541 Expression In 33 Tumors

Ensembl ID Gene symbol Log2 Foldchange Pvaue Cancer
ENSG00000142541 RPL13A 0.64 4.24e-17 KIRC
ENSG00000142541 RPL13A 0.65 3.27e-11 PRAD
Ensembl ID Gene symbol Cancer types Pubmed ID
ENSG00000142541 RPL13A liver cancer 16820872
ENSG00000142541 RPL13A renal tumors 18072593
ENSG00000142541 RPL13A breast cancer 19837153
ENSG00000142541 RPL13A tumor 20511187
ENSG00000142541 RPL13A tumor 21420492
ENSG00000142541 RPL13A tumors 23118918
ENSG00000142541 RPL13A breast tumor 23720140
ENSG00000142541 RPL13A breast cancer 24885022
ENSG00000142541 RPL13A ovarian cancer 25523336
ENSG00000142541 RPL13A small cell lung cancer 25573171
ENSG00000142541 RPL13A GBM 25977903
Ensembl ID Gene symbol Disease/phenotype Mutation type Mutated / Total samples Literature
Ensembl ID Gene symbol Cancer P-value Which worse show
ENSG00000142541 RPL13A SARC 0.018 high
ENSG00000142541 RPL13A CHOL 0.04 high
ENSG00000142541 RPL13A UVM 0.00056 low
ENSG00000142541 RPL13A LGG 0.011 low
ENSG00000142541 RPL13A LUSC 0.0089 low
ENSG00000142541 RPL13A KIRP 0.0011 low
ENSG00000142541 RPL13A KICH 0.021 low
ENSG00000142541 RPL13A PCPG 0.028 high
ENSG00000142541 RPL13A BRCA 0.0014 low
ENSG00000142541 RPL13A COAD 0.021 high
ENSG00000142541 RPL13A ESCA 0.026 high
ENSG00000142541 RPL13A KIRC 0.00085 high
ENSG00000142541 RPL13A GBM 0.0054 low
ENSG00000142541 RPL13A LIHC 0.0015 high
Ensembl ID Gene symbol Cancer CNV type -log10(q-value) G-score average amplitude frequency
ENSG00000142541 RPL13A LUSC Del 3.489677 0.099189 0.365873 0.279441
ENSG00000142541 RPL13A LUAD Del 2.773388 0.074694 0.319327 0.368217
ENSG00000142541 RPL13A LGG Del 16.086704 0.135067 0.663460 0.500975
ENSG00000142541 RPL13A CESC Del 0.616445 0.064592 0.416877 0.115254
ENSG00000142541 RPL13A SARC Del 3.029080 0.179880 0.454769 0.326848
ENSG00000142541 RPL13A GBM Del 9.904999 0.124777 0.500564 0.164645
ENSG00000142541 RPL13A PAAD Del 0.704455 0.045307 0.291729 0.114130
ENSG00000142541 RPL13A UCEC Del 0.799437 0.049011 0.465106 0.107607
ENSG00000142541 RPL13A OV Del 12.673942 0.324234 0.569008 0.516408