Ensembl ID ENSG00000137996 Gene ID 8634 Accession 17981
Gene Symbol RTCA Alias RPC;RTC1;RTCD1 Full Name RNA 3'-terminal phosphate cyclase
Position 1 : 100266216 - 100292769 Length 26554 bases Strand Plus strand
Status Confidence Main interacting RNAstRNARBP type Canonical_RBPs
Summary This gene encodes a member of the RNA 3'-phosphate cyclase family. The encoded protein plays a role in RNA metabolism by catalyzing the ATP-dependent conversion of the 3'-phosphate of RNA substrates to a 2',3'-cyclic phosphodiester. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene. [provided by RefSeq, Feb 2012]

ENSG00000137996 Expression In 33 Tumors

Ensembl ID Gene symbol Log2 Foldchange Pvaue Cancer
ENSG00000137996 RTCA 0.35 1.29e-14 BRCA
ENSG00000137996 RTCA 0.66 1.94e-23 UCEC
Ensembl ID Gene symbol Cancer types Pubmed ID
ENSG00000137996 RTCA tumors 1016941
ENSG00000137996 RTCA AML 11758228
ENSG00000137996 RTCA tumor 12571648
ENSG00000137996 RTCA Cancer 12777147
ENSG00000137996 RTCA tumors 15028961
ENSG00000137996 RTCA cancer 18237428
ENSG00000137996 RTCA tumor 2102659
ENSG00000137996 RTCA tumor 21712475
ENSG00000137996 RTCA tumor 2292455
ENSG00000137996 RTCA tumor 2334133
ENSG00000137996 RTCA pancreatic cancer 23369246
ENSG00000137996 RTCA breast cancer 23457587
ENSG00000137996 RTCA cancers 24310608
ENSG00000137996 RTCA breast cancer 24425784
ENSG00000137996 RTCA kidney tumors 24518236
ENSG00000137996 RTCA breast cancer 24556279
ENSG00000137996 RTCA esophageal cancer 24621512
ENSG00000137996 RTCA tumor 24750242
ENSG00000137996 RTCA Cancer 24885438
ENSG00000137996 RTCA colon cancer 24935351
ENSG00000137996 RTCA tumor 24949951
ENSG00000137996 RTCA breast cancer 25329705
ENSG00000137996 RTCA tumors 25474136
ENSG00000137996 RTCA tumor 25907958
ENSG00000137996 RTCA cancer 26329134
ENSG00000137996 RTCA Rectal cancer 26437257
ENSG00000137996 RTCA tumor 27029078
ENSG00000137996 RTCA tumor 27424476
ENSG00000137996 RTCA cancer 27518095
ENSG00000137996 RTCA Tumor 28205557
ENSG00000137996 RTCA gastric cancer 28359291
ENSG00000137996 RTCA tumors 28388009
ENSG00000137996 RTCA cancer 28626182
ENSG00000137996 RTCA lung cancer 28960861
ENSG00000137996 RTCA tumor 28962643
ENSG00000137996 RTCA cancers 28974240
ENSG00000137996 RTCA breast cancer 29018571
ENSG00000137996 RTCA tumor 29020972
ENSG00000137996 RTCA tumor 29467862
ENSG00000137996 RTCA cancer 29629151
ENSG00000137996 RTCA tumor 29970882
ENSG00000137996 RTCA cancer 29983466
ENSG00000137996 RTCA cancer 29983467
ENSG00000137996 RTCA cancer 30134517
ENSG00000137996 RTCA renal pelvis cancer 30214686
ENSG00000137996 RTCA tumor 30500365
ENSG00000137996 RTCA tumor 30774360
ENSG00000137996 RTCA gastric cancer 31571995
ENSG00000137996 RTCA tumor 31632267
ENSG00000137996 RTCA plasma-cell tumor 5920197
ENSG00000137996 RTCA tumor 59605
ENSG00000137996 RTCA tumors 6551966
ENSG00000137996 RTCA tumours 7464826
ENSG00000137996 RTCA tumor 820372
ENSG00000137996 RTCA tumor 8319246
ENSG00000137996 RTCA tumor 8439986
ENSG00000137996 RTCA tumor 850068
ENSG00000137996 RTCA tumors 8640839
ENSG00000137996 RTCA plasma cell tumours 974138
Ensembl ID Gene symbol Disease/phenotype Mutation type Mutated / Total samples Literature
Ensembl ID Gene symbol Cancer P-value Which worse show
ENSG00000137996 RTCA MESO 0.0037 high
ENSG00000137996 RTCA SARC 0.00047 high
ENSG00000137996 RTCA STAD 0.012 low
ENSG00000137996 RTCA UVM 0.0047 high
ENSG00000137996 RTCA PAAD 0.028 high
ENSG00000137996 RTCA UCEC 0.029 low
ENSG00000137996 RTCA LUSC 0.031 low
ENSG00000137996 RTCA HNSC 0.042 high
ENSG00000137996 RTCA KIRP 0.0016 high
ENSG00000137996 RTCA LUAD 0.0031 high
ENSG00000137996 RTCA BRCA 0.013 high
ENSG00000137996 RTCA ESCA 0.041 high
ENSG00000137996 RTCA OV 0.015 low
ENSG00000137996 RTCA BLCA 0.039 high
ENSG00000137996 RTCA GBM 0.022 high
ENSG00000137996 RTCA SKCM 0.003 low
ENSG00000137996 RTCA CESC 0.0073 low
Ensembl ID Gene symbol Cancer CNV type -log10(q-value) G-score average amplitude frequency
ENSG00000137996 RTCA LUSC Del 3.113883 0.095299 0.376765 0.421158
ENSG00000137996 RTCA LUAD Del 9.054086 0.120644 0.346672 0.290698
ENSG00000137996 RTCA CESC Del 1.025950 0.073767 0.432066 0.101695
ENSG00000137996 RTCA COAD Del 4.033716 0.073457 0.424904 0.286031
ENSG00000137996 RTCA ESCA Del 0.735217 0.097674 0.381803 0.304348
ENSG00000137996 RTCA SKCM Del 3.098816 0.100890 0.426901 0.237057
ENSG00000137996 RTCA HNSC Del 3.309507 0.079643 0.362101 0.189655
ENSG00000137996 RTCA PCPG Del 17.161600 0.263311 0.689993 0.746914
ENSG00000137996 RTCA BRCA Del 7.743656 0.105558 0.395452 0.327778
ENSG00000137996 RTCA STAD Del 1.091937 0.066530 0.358086 0.204082
ENSG00000137996 RTCA MESO Del 9.848411 0.391994 0.575957 0.413793