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| Ensembl ID | ENSG00000137309 | Gene ID | 3159 | Accession | 5010 |
| Gene Symbol | HMGA1 | Alias | HMG-R;HMGIY;HMGA1A | Full Name | high mobility group AT-hook 1 |
| Position | 6 : 34236873 - 34246231 | Length | 9359 bases | Strand | Plus strand |
| Status | Confidence | Main interacting RNAs | N.A. | RBP type | Non-canonical_RBPs |
| Summary | This gene encodes a chromatin-associated protein involved in the regulation of gene transcription, integration of retroviruses into chromosomes, and the metastatic progression of cancer cells. The encoded protein preferentially binds to the minor groove of AT-rich regions in double-stranded DNA. Multiple transcript variants encoding different isoforms have been found for this gene. Pseudogenes of this gene have been identified on multiple chromosomes. [provided by RefSeq, Jan 2016] | ||||
ENSG00000137309 Expression In 33 Tumors
| Ensembl ID | Gene symbol | Log2 Foldchange | Pvaue | Cancer |
|---|---|---|---|---|
| ENSG00000137309 | 1.57 | 1.36e-58 | BRCA | |
| ENSG00000137309 | 1.39 | 4.05e-32 | COAD | |
| ENSG00000137309 | 2.80 | 6.05e-157 | LUSC | |
| ENSG00000137309 | 2.90 | 3.69e-17 | PCPG | |
| ENSG00000137309 | 1.70 | 3.49e-26 | LIHC | |
| ENSG00000137309 | 2.13 | 1.83e-29 | UCEC | |
| ENSG00000137309 | 2.81 | 1.62e-14 | CHOL | |
| ENSG00000137309 | 3.14 | 7.90e-12 | CESC | |
| ENSG00000137309 | 2.27 | 2.04e-51 | LUAD |
| Ensembl ID | Gene symbol | Cancer types | Pubmed ID |
|---|---|---|---|
| ENSG00000137309 | colorectal cancer | 10096541 | |
| ENSG00000137309 | tumors | 10344762 | |
| ENSG00000137309 | tumors | 10347218 | |
| ENSG00000137309 | tumor | 10347561 | |
| ENSG00000137309 | colorectal cancer | 10404089 | |
| ENSG00000137309 | mesenchymal tumors | 10448117 | |
| ENSG00000137309 | mesenchymal tumors | 10451711 | |
| ENSG00000137309 | tumors | 10469450 | |
| ENSG00000137309 | tumors | 10472377 | |
| ENSG00000137309 | mesenchymal tumors | 10526529 | |
| ENSG00000137309 | tumors | 10550310 | |
| ENSG00000137309 | breast cancer | 10582687 | |
| ENSG00000137309 | benign tumor | 10714095 | |
| ENSG00000137309 | mesenchymal tumors | 10744071 | |
| ENSG00000137309 | tumors | 10862029 | |
| ENSG00000137309 | Cancer | 10866296 | |
| ENSG00000137309 | tumors | 10889043 | |
| ENSG00000137309 | mesenchymal tumors | 11035986 | |
| ENSG00000137309 | tumors | 11063803 | |
| ENSG00000137309 | tumours | 11076660 | |
| ENSG00000137309 | tumor | 11134344 | |
| ENSG00000137309 | tumours | 11212080 | |
| ENSG00000137309 | tumors | 11410365 | |
| ENSG00000137309 | mesenchymal tumors | 11494149 | |
| ENSG00000137309 | metastatic tumor | 11578814 | |
| ENSG00000137309 | tumors | 11672774 | |
| ENSG00000137309 | tumor | 11685128 | |
| ENSG00000137309 | prostate cancer | 11830513 | |
| ENSG00000137309 | tumors | 12082527 | |
| ENSG00000137309 | tumors | 12142746 | |
| ENSG00000137309 | cancer | 12188916 | |
| ENSG00000137309 | prostate cancer | 12532335 | |
| ENSG00000137309 | gastric cancer | 12713623 | |
| ENSG00000137309 | tumours | 12778070 | |
| ENSG00000137309 | malignant tumors | 12807722 | |
| ENSG00000137309 | tumours | 12970064 | |
| ENSG00000137309 | tumour | 12973668 | |
| ENSG00000137309 | cancer | 13680222 | |
| ENSG00000137309 | colorectal cancer | 14666966 | |
| ENSG00000137309 | tumors | 14714251 | |
| ENSG00000137309 | tumor | 15064752 | |
| ENSG00000137309 | cancer | 15087128 | |
| ENSG00000137309 | thyroid tumors | 15107999 | |
| ENSG00000137309 | prostate cancer | 15162382 | |
| ENSG00000137309 | mesenchymal tumors | 15249855 | |
| ENSG00000137309 | pancreatic cancer | 15272314 | |
| ENSG00000137309 | ovarian cancer | 15378028 | |
| ENSG00000137309 | breast cancer | 15569996 | |
| ENSG00000137309 | cancers | 15591590 | |
| ENSG00000137309 | tumors | 15650238 | |
| ENSG00000137309 | malignant tumours | 15713121 | |
| ENSG00000137309 | prostate cancer | 15835918 | |
| ENSG00000137309 | breast cancer | 15893306 | |
| ENSG00000137309 | cancer | 15923078 | |
| ENSG00000137309 | cancer | 15958792 | |
| ENSG00000137309 | cancers | 16007157 | |
| ENSG00000137309 | ovarian cancer | 16030107 | |
| ENSG00000137309 | tumor | 16033759 | |
| ENSG00000137309 | malignant peripheral nerve sheath tumors | 16056249 | |
| ENSG00000137309 | tumors | 16166307 | |
| ENSG00000137309 | cancer | 16306787 | |
| ENSG00000137309 | lung cancer | 16521118 | |
| ENSG00000137309 | thyroid cancer | 16540646 | |
| ENSG00000137309 | breast cancer | 16707431 | |
| ENSG00000137309 | cancer | 16752910 | |
| ENSG00000137309 | tumor | 17045586 | |
| ENSG00000137309 | pancreatic cancers | 17114012 | |
| ENSG00000137309 | tumor | 17178855 | |
| ENSG00000137309 | tumors | 17290307 | |
| ENSG00000137309 | pancreatic cancer | 17342093 | |
| ENSG00000137309 | tumor | 17364334 | |
| ENSG00000137309 | cancer | 17455969 | |
| ENSG00000137309 | cancer | 17510387 | |
| ENSG00000137309 | pancreatic cancer | 17510394 | |
| ENSG00000137309 | tumor | 17550233 | |
| ENSG00000137309 | tumor | 17616660 | |
| ENSG00000137309 | mesenchymal tumors | 17654722 | |
| ENSG00000137309 | cancer | 17877762 | |
| ENSG00000137309 | germ cell tumours | 17935122 | |
| ENSG00000137309 | tumour | 18155899 | |
| ENSG00000137309 | malignant epithelial tumors | 18202751 | |
| ENSG00000137309 | pancreatic cancer | 18316571 | |
| ENSG00000137309 | tumor | 18473350 | |
| ENSG00000137309 | mesenchymal tumors | 18505920 | |
| ENSG00000137309 | tumours | 18651940 | |
| ENSG00000137309 | tumors | 18670638 | |
| ENSG00000137309 | malignant tumours | 18783938 | |
| ENSG00000137309 | thyroid tumor | 19060921 | |
| ENSG00000137309 | cancers | 19074878 | |
| ENSG00000137309 | tumours | 19156147 | |
| ENSG00000137309 | tumor | 19602464 | |
| ENSG00000137309 | colorectal cancer | 19609535 | |
| ENSG00000137309 | cancer | 19687300 | |
| ENSG00000137309 | gastric cancer | 19729480 | |
| ENSG00000137309 | tumor | 19820691 | |
| ENSG00000137309 | pancreatic cancer | 19848064 | |
| ENSG00000137309 | large-cell lung cancer | 19903768 | |
| ENSG00000137309 | cancers | 19916743 | |
| ENSG00000137309 | tumor | 20004941 | |
| ENSG00000137309 | cancers | 20068164 | |
| ENSG00000137309 | ovarian cancer | 20228781 | |
| ENSG00000137309 | cancer | 20335021 | |
| ENSG00000137309 | tumour | 20459557 | |
| ENSG00000137309 | head and neck tumors | 20530413 | |
| ENSG00000137309 | tumor | 20535291 | |
| ENSG00000137309 | tumours | 20701767 | |
| ENSG00000137309 | cancer | 20724141 | |
| ENSG00000137309 | tumor | 20961861 | |
| ENSG00000137309 | cancer | 21087998 | |
| ENSG00000137309 | prostate cancer | 21138859 | |
| ENSG00000137309 | tumors | 21156240 | |
| ENSG00000137309 | cancer | 21282977 | |
| ENSG00000137309 | tumor | 21300033 | |
| ENSG00000137309 | tumor | 21336378 | |
| ENSG00000137309 | cancer | 21530505 | |
| ENSG00000137309 | lung cancer | 21542969 | |
| ENSG00000137309 | tumor | 21573994 | |
| ENSG00000137309 | tumors | 21656127 | |
| ENSG00000137309 | Tumor | 21779448 | |
| ENSG00000137309 | tumor | 21835047 | |
| ENSG00000137309 | metastatic cancers | 21854010 | |
| ENSG00000137309 | tumor | 21984063 | |
| ENSG00000137309 | tumors | 22053823 | |
| ENSG00000137309 | prostate cancer | 22213442 | |
| ENSG00000137309 | tumor | 22249617 | |
| ENSG00000137309 | Colon Cancer | 22276142 | |
| ENSG00000137309 | tumour | 22276603 | |
| ENSG00000137309 | tumor | 22332738 | |
| ENSG00000137309 | tumours | 22363436 | |
| ENSG00000137309 | cancer | 22389255 | |
| ENSG00000137309 | cancers | 22419021 | |
| ENSG00000137309 | gastric cancer | 22448338 | |
| ENSG00000137309 | tumor | 22503056 | |
| ENSG00000137309 | cancer | 22654833 | |
| ENSG00000137309 | colorectal cancers | 22706202 | |
| ENSG00000137309 | pancreatic cancers | 22898640 | |
| ENSG00000137309 | prostate cancer | 22912571 | |
| ENSG00000137309 | cancer | 22932725 | |
| ENSG00000137309 | tumours | 22961697 | |
| ENSG00000137309 | tumor | 22965931 | |
| ENSG00000137309 | cancers | 23166588 | |
| ENSG00000137309 | colorectal cancer | 23201162 | |
| ENSG00000137309 | cancers | 23311322 | |
| ENSG00000137309 | prostate cancer | 23325049 | |
| ENSG00000137309 | breast cancer | 23545254 | |
| ENSG00000137309 | Tumor | 23658826 | |
| ENSG00000137309 | bladder cancer | 23796420 | |
| ENSG00000137309 | prostate cancer | 23798998 | |
| ENSG00000137309 | tumors | 23926501 | |
| ENSG00000137309 | tumor | 23935884 | |
| ENSG00000137309 | cancer | 23936116 | |
| ENSG00000137309 | breast cancer | 23945276 | |
| ENSG00000137309 | cancer | 24062859 | |
| ENSG00000137309 | tumours | 24336083 | |
| ENSG00000137309 | cancer | 24367622 | |
| ENSG00000137309 | cancer | 24410339 | |
| ENSG00000137309 | lung cancer | 24564251 | |
| ENSG00000137309 | cancer | 24684280 | |
| ENSG00000137309 | colorectal cancer | 24696416 | |
| ENSG00000137309 | tumor | 24803022 | |
| ENSG00000137309 | colon cancer | 24833610 | |
| ENSG00000137309 | prostate cancer | 24837491 | |
| ENSG00000137309 | tumor | 24870930 | |
| ENSG00000137309 | tumour | 25245141 | |
| ENSG00000137309 | cancer | 25268743 | |
| ENSG00000137309 | breast cancer | 25276782 | |
| ENSG00000137309 | cancer | 25313540 | |
| ENSG00000137309 | non-small cell lung cancer | 25344216 | |
| ENSG00000137309 | cancer | 25409711 | |
| ENSG00000137309 | tumor | 25455159 | |
| ENSG00000137309 | cancer | 25483074 | |
| ENSG00000137309 | breast cancer | 25572132 | |
| ENSG00000137309 | epithelial ovarian cancer | 25586095 | |
| ENSG00000137309 | tumor | 25621995 | |
| ENSG00000137309 | tumor | 25755724 | |
| ENSG00000137309 | breast cancer | 25772486 | |
| ENSG00000137309 | tumors | 25823555 | |
| ENSG00000137309 | breast cancer | 25846193 | |
| ENSG00000137309 | cancer | 25859543 | |
| ENSG00000137309 | pituitary tumors | 25894544 | |
| ENSG00000137309 | tumors | 26009886 | |
| ENSG00000137309 | cancer | 26009897 | |
| ENSG00000137309 | cervical cancer | 26084422 | |
| ENSG00000137309 | GBM | 26092597 | |
| ENSG00000137309 | tumor | 26117853 | |
| ENSG00000137309 | pituitary tumors | 26137461 | |
| ENSG00000137309 | tumor | 26244988 | |
| ENSG00000137309 | malignant tumours | 26251519 | |
| ENSG00000137309 | breast cancer | 26265440 | |
| ENSG00000137309 | tumours | 26411793 | |
| ENSG00000137309 | Breast Cancer | 26527623 | |
| ENSG00000137309 | gastric cancer | 26537313 | |
| ENSG00000137309 | breast cancer | 26627005 | |
| ENSG00000137309 | malignant tumors | 26657872 | |
| ENSG00000137309 | Breast Cancer | 26680797 | |
| ENSG00000137309 | tumor | 26708416 | |
| ENSG00000137309 | breast cancer | 26806308 | |
| ENSG00000137309 | tumour | 26806704 | |
| ENSG00000137309 | non-small cell lung cancer | 26834854 | |
| ENSG00000137309 | cancer | 26889953 | |
| ENSG00000137309 | cancer | 26895108 | |
| ENSG00000137309 | tumor | 26898758 | |
| ENSG00000137309 | tumor | 26923360 | |
| ENSG00000137309 | Cancer | 26980699 | |
| ENSG00000137309 | tumors | 27001612 | |
| ENSG00000137309 | thyroid cancer | 27008379 | |
| ENSG00000137309 | cancers | 27025651 | |
| ENSG00000137309 | esophageal tumors | 27027341 | |
| ENSG00000137309 | cancer | 27045138 | |
| ENSG00000137309 | tumors | 27081085 | |
| ENSG00000137309 | prostate cancer | 27175617 | |
| ENSG00000137309 | tumors | 27264189 | |
| ENSG00000137309 | tumor | 27292155 | |
| ENSG00000137309 | tumor | 27470368 | |
| ENSG00000137309 | tumor | 27486901 | |
| ENSG00000137309 | colorectal cancer | 27537384 | |
| ENSG00000137309 | ovarian cancer | 27561949 | |
| ENSG00000137309 | tumor | 27602961 | |
| ENSG00000137309 | breast cancer | 27723831 | |
| ENSG00000137309 | Tumor | 27855356 | |
| ENSG00000137309 | cancer | 27874091 | |
| ENSG00000137309 | cancer | 28000891 | |
| ENSG00000137309 | tumor | 28032857 | |
| ENSG00000137309 | tumors | 28255749 | |
| ENSG00000137309 | Non-Small Cell Lung Cancer | 28290473 | |
| ENSG00000137309 | colon cancer | 28358427 | |
| ENSG00000137309 | cancers | 28367244 | |
| ENSG00000137309 | thyroid cancer | 28393241 | |
| ENSG00000137309 | colorectal cancer | 28452345 | |
| ENSG00000137309 | tumor | 28467612 | |
| ENSG00000137309 | cancers | 28697176 | |
| ENSG00000137309 | pancreatic cancer | 28703779 | |
| ENSG00000137309 | tumor | 28731203 | |
| ENSG00000137309 | tumor | 28753127 | |
| ENSG00000137309 | cancer | 28777374 | |
| ENSG00000137309 | breast cancer | 28912895 | |
| ENSG00000137309 | cancer | 28924209 | |
| ENSG00000137309 | cancer | 29023799 | |
| ENSG00000137309 | lung cancer | 29038488 | |
| ENSG00000137309 | tumor | 29113200 | |
| ENSG00000137309 | cancer | 29149041 | |
| ENSG00000137309 | cancer | 29152644 | |
| ENSG00000137309 | malignant tumors | 29245994 | |
| ENSG00000137309 | cancer | 29262452 | |
| ENSG00000137309 | cancers | 29266325 | |
| ENSG00000137309 | Breast Cancer | 29316384 | |
| ENSG00000137309 | cancer | 29328367 | |
| ENSG00000137309 | Non-melanoma Skin Cancer | 29374701 | |
| ENSG00000137309 | cancers | 29416690 | |
| ENSG00000137309 | cancer | 29462157 | |
| ENSG00000137309 | cancers | 29511732 | |
| ENSG00000137309 | tumor | 29581847 | |
| ENSG00000137309 | Tumor | 29618461 | |
| ENSG00000137309 | cancer | 29697014 | |
| ENSG00000137309 | tumour | 29743479 | |
| ENSG00000137309 | tumor | 29789601 | |
| ENSG00000137309 | cancer | 29853899 | |
| ENSG00000137309 | tumors | 29880060 | |
| ENSG00000137309 | breast cancer | 29928320 | |
| ENSG00000137309 | Breast Cancer | 29945308 | |
| ENSG00000137309 | tumors | 29980789 | |
| ENSG00000137309 | tumor | 30008826 | |
| ENSG00000137309 | gastric cancer | 30098426 | |
| ENSG00000137309 | Triple-Negative Breast Cancer | 30135148 | |
| ENSG00000137309 | bladder tumor | 30216500 | |
| ENSG00000137309 | DLBCL | 30216798 | |
| ENSG00000137309 | tumour | 30228296 | |
| ENSG00000137309 | tumor | 30353687 | |
| ENSG00000137309 | breast cancer | 30365085 | |
| ENSG00000137309 | tumour | 30414623 | |
| ENSG00000137309 | Cancer | 30614613 | |
| ENSG00000137309 | non-small-cell lung cancer | 30666160 | |
| ENSG00000137309 | colorectal cancer | 30776481 | |
| ENSG00000137309 | tumor | 30778219 | |
| ENSG00000137309 | ovarian cancer | 30816441 | |
| ENSG00000137309 | neuroendocrine tumors | 30999005 | |
| ENSG00000137309 | Cancer | 30999858 | |
| ENSG00000137309 | cervical cancer | 31043793 | |
| ENSG00000137309 | cancer | 31067275 | |
| ENSG00000137309 | tumors | 31096664 | |
| ENSG00000137309 | gastric cancer | 31104318 | |
| ENSG00000137309 | gastric cancer | 31115003 | |
| ENSG00000137309 | cancer | 31116627 | |
| ENSG00000137309 | cancer | 31151404 | |
| ENSG00000137309 | Breast Cancer | 31167352 | |
| ENSG00000137309 | tumor | 31188873 | |
| ENSG00000137309 | bladder cancer | 31196036 | |
| ENSG00000137309 | tumours | 31217897 | |
| ENSG00000137309 | gastric cancer | 31229266 | |
| ENSG00000137309 | Triple-Negative Breast Cancers | 31300541 | |
| ENSG00000137309 | tumor | 31311575 | |
| ENSG00000137309 | tumor | 31340839 | |
| ENSG00000137309 | Triple-Negative Breast Cancer | 31382504 | |
| ENSG00000137309 | tumor | 31394192 | |
| ENSG00000137309 | pituitary tumors | 31487906 | |
| ENSG00000137309 | breast cancer | 31531802 | |
| ENSG00000137309 | GI tumors | 31737655 | |
| ENSG00000137309 | Breast Cancer | 31779212 | |
| ENSG00000137309 | non-small cell lung cancer | 31814893 | |
| ENSG00000137309 | Gastric Cancer | 31908497 | |
| ENSG00000137309 | prostate cancer | 8221692 | |
| ENSG00000137309 | tumor | 8495429 | |
| ENSG00000137309 | tumour | 8761372 | |
| ENSG00000137309 | tumors | 8946199 | |
| ENSG00000137309 | atypical lipomatous tumors | 9212729 | |
| ENSG00000137309 | mesenchymal tumors | 9290959 | |
| ENSG00000137309 | breast cancer | 9622058 | |
| ENSG00000137309 | tumor | 9692546 | |
| ENSG00000137309 | thyroid tumors | 9751634 | |
| ENSG00000137309 | mesenchymal tumors | 9824199 | |
| ENSG00000137309 | tumor | 9973936 | |
| ENSG00000137309 | tumors | 9989879 |
| Ensembl ID | Gene symbol | Disease/phenotype | Mutation type | Mutated / Total samples | Literature |
|---|---|---|---|---|---|
| ENSG00000137309 | colorectal adenocarcinoma | sequence_alteration | 0.4394% (5/1138) | 1 entry | |
| ENSG00000137309 | brain glioblastoma | sequence_alteration | 0.7559% (7/926) | 2 entries | |
| ENSG00000137309 | esophageal squamous cell carcinoma | sequence_alteration | 0.1481% (1/675) | 1 entry | |
| ENSG00000137309 | prostate adenocarcinoma | sequence_alteration | 0.06878% (1/1454) | 1 entry | |
| ENSG00000137309 | melanoma | missense_variant | 0.9901% (1/101) | 1 entry | |
| ENSG00000137309 | Merkel cell skin cancer | sequence_alteration | 3.333% (1/30) | 1 entry | |
| ENSG00000137309 | bile duct adenocarcinoma | sequence_alteration | 0.5291% (1/189) | 1 entry |
| Ensembl ID | Gene symbol | Cancer | P-value | Which worse | show |
|---|---|---|---|---|---|
| ENSG00000137309 | MESO | 0.0024 | high | ||
| ENSG00000137309 | STAD | 0.0061 | low | ||
| ENSG00000137309 | UVM | 0.023 | low | ||
| ENSG00000137309 | PAAD | 0.00016 | high | ||
| ENSG00000137309 | UCEC | 0.00049 | high | ||
| ENSG00000137309 | ACC | 0.011 | high | ||
| ENSG00000137309 | LUSC | 0.048 | low | ||
| ENSG00000137309 | HNSC | 0.0011 | high | ||
| ENSG00000137309 | PCPG | 0.0035 | low | ||
| ENSG00000137309 | THYM | 0.00015 | low | ||
| ENSG00000137309 | COAD | 0.018 | low | ||
| ENSG00000137309 | UCS | 0.044 | low | ||
| ENSG00000137309 | OV | 0.039 | low | ||
| ENSG00000137309 | BLCA | 0.013 | high | ||
| ENSG00000137309 | LAML | 7e-04 | high | ||
| ENSG00000137309 | SKCM | 0.019 | high |
| Ensembl ID | Gene symbol | Cancer | CNV type | -log10(q-value) | G-score | average amplitude | frequency |
|---|---|---|---|---|---|---|---|
| ENSG00000137309 | PAAD | Amp | 1.006594 | 0.092217 | 0.745945 | 0.065217 | |
| ENSG00000137309 | SKCM | Amp | 1.601755 | 0.149831 | 0.741895 | 0.509537 | |
| ENSG00000137309 | UVM | Amp | 1.872709 | 0.238074 | 1.140112 | 0.537500 |