Ensembl ID ENSG00000135316 Gene ID 10492 Accession 16918
Gene Symbol SYNCRIP Alias PP68;NSAP1;GRYRBP;HNRNPQ;HNRPQ1;GRY-RBP;hnRNP-Q Full Name synaptotagmin binding cytoplasmic RNA interacting protein
Position 6 : 85607779 - 85644063 Length 36285 bases Strand Minus strand
Status Confidence Main interacting RNAsmRNARBP type Canonical_RBPs
Summary This gene encodes a member of the cellular heterogeneous nuclear ribonucleoprotein (hnRNP) family. hnRNPs are RNA binding proteins that complex with heterogeneous nuclear RNA (hnRNA) and regulate alternative splicing, polyadenylation, and other aspects of mRNA metabolism and transport. The encoded protein plays a role in multiple aspects of mRNA maturation and is associated with several multiprotein complexes including the apoB RNA editing-complex and survival of motor neurons (SMN) complex. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene, and a pseudogene of this gene is located on the short arm of chromosome 20. [provided by RefSeq, Dec 2011]

ENSG00000135316 Expression In 33 Tumors

Ensembl ID Gene symbol Log2 Foldchange Pvaue Cancer
ENSG00000135316 SYNCRIP 0.67 1.43e-16 COAD
ENSG00000135316 SYNCRIP 0.55 2.04e-17 LUSC
Ensembl ID Gene symbol Cancer types Pubmed ID
ENSG00000135316 SYNCRIP colon cancer 19137262
ENSG00000135316 SYNCRIP breast cancer 19223972
ENSG00000135316 SYNCRIP tumors 28079881
ENSG00000135316 SYNCRIP cancer 28436985
ENSG00000135316 SYNCRIP tumor 30266814
Ensembl ID Gene symbol Disease/phenotype Mutation type Mutated / Total samples Literature
Ensembl ID Gene symbol Cancer P-value Which worse show
ENSG00000135316 SYNCRIP MESO 0.0017 high
ENSG00000135316 SYNCRIP PAAD 0.019 high
ENSG00000135316 SYNCRIP THCA 0.026 high
ENSG00000135316 SYNCRIP ACC 0.027 high
ENSG00000135316 SYNCRIP LGG 0.00024 high
ENSG00000135316 SYNCRIP READ 0.0081 low
ENSG00000135316 SYNCRIP KIRP 0.0024 high
ENSG00000135316 SYNCRIP KICH 0.0031 high
ENSG00000135316 SYNCRIP LUAD 0.0076 high
ENSG00000135316 SYNCRIP THYM 0.0024 low
ENSG00000135316 SYNCRIP ESCA 0.015 high
ENSG00000135316 SYNCRIP OV 0.0012 low
ENSG00000135316 SYNCRIP DLBC 0.04 low
ENSG00000135316 SYNCRIP KIRC 0.025 low
ENSG00000135316 SYNCRIP PRAD 0.042 low
ENSG00000135316 SYNCRIP GBM 0.0099 low
ENSG00000135316 SYNCRIP SKCM 0.002 low
ENSG00000135316 SYNCRIP CESC 0.022 high
Ensembl ID Gene symbol Cancer CNV type -log10(q-value) G-score average amplitude frequency
ENSG00000135316 SYNCRIP CHOL Del 0.655802 0.201493 0.640955 0.611111
ENSG00000135316 SYNCRIP LUAD Del 1.747525 0.064623 0.377245 0.490310
ENSG00000135316 SYNCRIP DLBC Del 2.241546 0.218786 0.558990 0.354167
ENSG00000135316 SYNCRIP BRCA Del 8.884671 0.110370 0.482259 0.328704
ENSG00000135316 SYNCRIP STAD Del 2.498570 0.084452 0.384129 0.213152
ENSG00000135316 SYNCRIP PRAD Del 60.563568 0.368145 0.569969 0.355691