Ensembl ID ENSG00000129315 Gene ID 904 Accession 1599
Gene Symbol CCNT1 Alias CCNT;CYCT1;HIVE1 Full Name cyclin T1
Position 12 : 48688458 - 48716998 Length 28541 bases Strand Minus strand
Status Confidence Main interacting RNAsncRNARBP type Non-canonical_RBPs
Summary This gene encodes a member of the highly conserved cyclin C subfamily. The encoded protein tightly associates with cyclin-dependent kinase 9, and is a major subunit of positive transcription elongation factor b (p-TEFb). In humans, there are multiple forms of positive transcription elongation factor b, which may include one of several different cyclins along with cyclin-dependent kinase 9. The complex containing the encoded cyclin and cyclin-dependent kinase 9 acts as a cofactor of human immunodeficiency virus type 1 (HIV-1) Tat protein, and is both necessary and sufficient for full activation of viral transcription. This cyclin and its kinase partner are also involved in triggering transcript elongation through phosphorylation of the carboxy-terminal domain of the largest RNA polymerase II subunit. Overexpression of this gene is implicated in tumor growth. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Apr 2013]

ENSG00000129315 Expression In 33 Tumors

Ensembl ID Gene symbol Log2 Foldchange Pvaue Cancer
Ensembl ID Gene symbol Cancer types Pubmed ID
ENSG00000129315 CCNT1 tumor 11704662
ENSG00000129315 CCNT1 tumor 14751090
ENSG00000129315 CCNT1 tumor 15753651
ENSG00000129315 CCNT1 tumor 18473913
ENSG00000129315 CCNT1 tumor 20714219
ENSG00000129315 CCNT1 tumour 21982796
ENSG00000129315 CCNT1 cancer 23252711
ENSG00000129315 CCNT1 tumor 26788195
ENSG00000129315 CCNT1 gastrointestinal stromal tumors 27284431
ENSG00000129315 CCNT1 cancer 27847320
ENSG00000129315 CCNT1 cancer 28855816
ENSG00000129315 CCNT1 pancreatic cancer 29104242
ENSG00000129315 CCNT1 tumor 30240439
ENSG00000129315 CCNT1 tumor 31527550
ENSG00000129315 CCNT1 cancer 31603123
Ensembl ID Gene symbol Disease/phenotype Mutation type Mutated / Total samples Literature
Ensembl ID Gene symbol Cancer P-value Which worse show
ENSG00000129315 CCNT1 MESO 0.045 high
ENSG00000129315 CCNT1 UVM 0.031 high
ENSG00000129315 CCNT1 UCEC 0.012 high
ENSG00000129315 CCNT1 THCA 0.047 high
ENSG00000129315 CCNT1 ACC 0.0081 high
ENSG00000129315 CCNT1 LGG 0.00011 high
ENSG00000129315 CCNT1 KIRP 0.04 high
ENSG00000129315 CCNT1 KICH 0.0024 high
ENSG00000129315 CCNT1 PCPG 0.05 low
ENSG00000129315 CCNT1 THYM 0.045 low
ENSG00000129315 CCNT1 BRCA 0.00019 high
ENSG00000129315 CCNT1 ESCA 0.0015 high
ENSG00000129315 CCNT1 KIRC 0.0013 low
ENSG00000129315 CCNT1 TGCT 0.029 low
ENSG00000129315 CCNT1 GBM 0.022 low
ENSG00000129315 CCNT1 SKCM 0.0029 low
ENSG00000129315 CCNT1 CESC 0.016 high
ENSG00000129315 CCNT1 LIHC 0.0022 high
Ensembl ID Gene symbol Cancer CNV type -log10(q-value) G-score average amplitude frequency
ENSG00000129315 CCNT1 LGG Del 0.615589 0.037777 0.431822 0.132554
ENSG00000129315 CCNT1 GBM Del 0.924673 0.054789 0.484366 0.128250