Ensembl ID ENSG00000128394 Gene ID 200316 Accession 17356
Gene Symbol APOBEC3F Alias A3F;KA6;ARP8;BK150C2.4.MRNA Full Name apolipoprotein B mRNA editing enzyme catalytic subunit 3F
Position 22 : 39040857 - 39055972 Length 15116 bases Strand Plus strand
Status Confidence Main interacting RNAsmRNARBP type Canonical_RBPs
Summary This gene is a member of the cytidine deaminase gene family. It is one of seven related genes or pseudogenes found in a cluster, thought to result from gene duplication, on chromosome 22. Members of the cluster encode proteins that are structurally and functionally related to the C to U RNA-editing cytidine deaminase APOBEC1. It is thought that the proteins may be RNA editing enzymes and have roles in growth or cell cycle control. Alternatively spliced transcript variants encoding different isoforms have been identified. [provided by RefSeq, Jul 2008]

ENSG00000128394 Expression In 33 Tumors

Ensembl ID Gene symbol Log2 Foldchange Pvaue Cancer
ENSG00000128394 APOBEC3F 1.09 3.92e-58 KIRC
ENSG00000128394 APOBEC3F 0.75 9.91e-12 LUSC
ENSG00000128394 APOBEC3F -1.1 4.05e-17 PRAD
ENSG00000128394 APOBEC3F 0.78 8.04e-18 KIRP
Ensembl ID Gene symbol Cancer types Pubmed ID
ENSG00000128394 APOBEC3F prostate cancer 20335265
ENSG00000128394 APOBEC3F cancer 20811639
ENSG00000128394 APOBEC3F prostate cancer 25296601
ENSG00000128394 APOBEC3F tumor 26221327
ENSG00000128394 APOBEC3F breast cancers 26682542
ENSG00000128394 APOBEC3F tumor 26760979
ENSG00000128394 APOBEC3F tumor 27283319
ENSG00000128394 APOBEC3F tumor 30100060
ENSG00000128394 APOBEC3F gastric cancer 30431097
ENSG00000128394 APOBEC3F tumour 30624727
Ensembl ID Gene symbol Disease/phenotype Mutation type Mutated / Total samples Literature
Ensembl ID Gene symbol Cancer P-value Which worse show
ENSG00000128394 APOBEC3F MESO 0.032 low
ENSG00000128394 APOBEC3F SARC 0.032 low
ENSG00000128394 APOBEC3F UVM 0.0052 high
ENSG00000128394 APOBEC3F UCEC 0.014 low
ENSG00000128394 APOBEC3F ACC 0.012 high
ENSG00000128394 APOBEC3F LUSC 0.017 low
ENSG00000128394 APOBEC3F HNSC 0.033 high
ENSG00000128394 APOBEC3F READ 0.023 low
ENSG00000128394 APOBEC3F LUAD 0.0029 high
ENSG00000128394 APOBEC3F PCPG 0.05 low
ENSG00000128394 APOBEC3F THYM 0.0011 low
ENSG00000128394 APOBEC3F BRCA 0.0011 low
ENSG00000128394 APOBEC3F COAD 0.00027 high
ENSG00000128394 APOBEC3F OV 0.029 low
ENSG00000128394 APOBEC3F KIRC 0.014 high
ENSG00000128394 APOBEC3F TGCT 0.017 high
ENSG00000128394 APOBEC3F BLCA 0.0012 low
ENSG00000128394 APOBEC3F GBM 0.01 high
ENSG00000128394 APOBEC3F CESC 0.00026 low
ENSG00000128394 APOBEC3F LIHC 0.032 high
Ensembl ID Gene symbol Cancer CNV type -log10(q-value) G-score average amplitude frequency
ENSG00000128394 APOBEC3F THYM Del 1.199597 0.051052 0.435240 0.138211
ENSG00000128394 APOBEC3F SKCM Amp 2.375573 0.172086 0.589098 0.386921